Mp5g06850



Description

Annotation

Database ID Description
PIRSF PIRSF005739 O-mtase
ProSiteProfiles PS51683 SAM-dependent O-methyltransferase class II-type profile.
SUPERFAMILY SSF46785 "Winged helix" DNA-binding domain
Pfam PF00891 O-methyltransferase domain
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases
Pfam PF08100 Dimerisation domain
PANTHER PTHR11746 O-METHYLTRANSFERASE
Gene3D G3DSA:1.10.10.10 -
KOG KOG3178 Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases; [R]
MapolyID Mapoly0136s0036 -
GO GO:0008168 methyltransferase activity
GO GO:0032259 methylation
GO GO:0046983 protein dimerization activity
GO GO:0008171 O-methyltransferase activity
GO GO:0008757 S-adenosylmethionine-dependent methyltransferase activity
GO GO:0019438 obsolete aromatic compound biosynthetic process

Nomenclature

Gene symbol Product Transcript ID Status
MpOMT19 Secondary metabolism enzyme, O-methyltransferase Provisional

Associated Literature (AI-based literature mining, Beta-version)

Secondary metabolism enzyme, O-methyltransferase (from nomenclature)

0 core 1 peripheral

Briginshaw, L. N., et al. (2022) · New Phytologist  research experimental background
O-methyltransferase; listed in Table 1 among MpKAN-responsive DEGs.

Transcript models

Transcript ID Location Sequences Extract region
Mp5g06850.1 chr5:8992865..8994888 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp5g06850 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp5g06850 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.