Mp5g07060



Description

Annotation

Database ID Description
PANTHER PTHR32370 OS12G0117600 PROTEIN
FunFam G3DSA:3.30.710.10:FF:000168 BTB/POZ domain-containing protein At1g03010
Pfam PF00651 BTB/POZ domain
ProSiteProfiles PS50097 BTB domain profile.
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF03000 NPH3 family
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A
SUPERFAMILY SSF54695 POZ domain
Coils Coil Coil
ProSiteProfiles PS51649 NPH3 domain profile.
KOG KOG4350 Uncharacterized conserved protein, contains BTB/POZ domain; C-term missing; [R]
MapolyID Mapoly0136s0015 -
GO GO:0005515 protein binding

Nomenclature

Gene symbol Product Transcript ID Status
MpNCH1 NPH3/RPT2-like (NRL) protein for chloroplast accumulation response Published

Associated Literature (AI-based literature mining, Beta-version)

RPT2/NCH1-subfamily NPH3-like protein (Mapoly0136s0015); essential for the phototropin-mediated chloroplast accumulation response (but not avoidance) in M. polymorpha; conserved across land plants.

2 core 0 peripheral

Hanawa M, Hirano S, Sasaki K, Takahashi H, Kodama Y. (2026) · Biochemical and biophysical research communications  research experimental subject
RPT2/NCH1 ortholog; identified as a potential phosphorylation substrate of Mpphot in the chloroplast accumulation response.
Suetsugu, N., et al. (2016) · Proceeding of the National Academy of Sciences USA  research experimental subject
RPT2/NCH1-subfamily NPH3-like protein (Mapoly0136s0015); essential for the phototropin-mediated chloroplast accumulation response (but not avoidance) in M. polymorpha; conserved across land plants.

Transcript models

Transcript ID Location Sequences Extract region
Mp5g07060.1 chr5:9213097..9218967 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp5g07060 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp5g07060 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.