Mp5g07730
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Pfam | PF13812 | Pentatricopeptide repeat domain |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. |
| Pfam | PF13041 | PPR repeat family |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain |
| PANTHER | PTHR47941 | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL |
| Pfam | PF12854 | PPR repeat |
| NCBIfam | TIGR00756 | pentatricopeptide repeat |
| KOG | KOG4422 | Uncharacterized conserved protein; N-term missing; C-term missing; [S] |
| MapolyID | Mapoly0127s0011 | - |
| GO | GO:0005515 | protein binding |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpPPR_56 | Pentatricopeptide repeat proteins | Published |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp5g07730 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp5g07730.1 GTCTGCTAAT TAATATGGTC GAGCTGTAAA TGAATGTTAA AGTATACTCA CAGGCAGCGA GAAGACGGCC TTTCGATGCT GATGGCATCG TTCAGCGACA AGCAGGGACT CCAGCGACCT ACCGAGGATT TTATTTTAGT CGCTTTTGTA TAAGAAAACA AAACAAATGG AAGAGACCAG CGACAAAGGT GTCACGGCCA TCGAAGAATG TGTGCACATT TCGAGCTGCT CCGCTTGACA GCTCTTCTCC TCCGGACGCG AGGACTAGCG GGCGTTGCAG TATCTACCAT CGCGCAATGG GTGCAGTCGA CGGATCTAAT CAACAGTCTT GGCAACCTTA GTGGCCTCCC TTCAGGTCAG TGATATTGGC TTTGTCATGG TTTTGTCTTT GCTGATCAGC TCCAGCTTTG CCCTGTTCTA CCTCCTTGAG AATTTGGACT CGTTTTCGAC TATGTAAATA ATTCCGGGGA TTTCACCTTT TCGGTTGTCC TTGACTTCTT ATATACCTTG AATCTGGTAT TCGGCCGCAA GAGTTCGAGA TTGGCGAAAC GACTTTGTGG CCCGCGAACA CTTTAGATGT AGAGTGATCT GTTTAGGGTG TGAGGAATCC GTGGAGTTCG TATCAGGTAT TTTAGGTCTG CAGAACGATC AGCTGTATGC AATGGTATAT CAAAGATGAT GATGCAGATG GAGAGTGTTT GGATTCCGGG GTCTTCTTCA TGACAGATTT GAAGTGAAAA GCTTATTCGT TCTAGATCCT GAATGCGTCT GGGGAGCTTT AAGAAATCGT CGTTCTTAGT AGGGAGGAAA GTTCCAGTAC GATTAGGAGT TAGAGTATGC GTAATCTTTC TGGATGTCGA TGAACTCTGT ACTGATTCCA GATCTTTTGC TCTGTGTTCA ATTATGTATA TTTCATGGGA AGAAAGTACC GTGTTAATTA TCTTGTTATT CTTACTTACA TATGCAATTC GTCAAAGTTA TCAGAGTAGG TGTGCCCTCA CAGATCGTTT TTCTCTAATC GGAACCTTAT TTGCTAATGC AGGATGGCAC CTCTTCTCCA CTGCCGCAAG CATCAGATGC TACGATCAGG CATTTCGTGG AAATGTCTGT GCAAGAGTAT GGGTGCTTTA GGCACGGGTG GTGCAAATTG GGTTTCAGAA AACACTTGTC ACAGGTGGTA CACCGTCGAC GTAGAATGTT TGAGGGAAGG TGATCAGATA GCTAGCCAAG GAGAAGAGCG TAGCTGCAGC GTTCCAAGTA CGAACGGTAG GGTCGTGGAT GGGACAGGTG AAAATGTTCG TGCACTTACT GTGGACAGCT TTGATTCCTG TACAGAACCT AGTAAAAATA AAAACCACGA AGGTTTGGTT AGAAAGGCTA GTTTAGGCTC TTTGACTAGT GGAGGCTTCT CTTGTCTCCA GCAAGAACAG ATTTTCAGAT CTCAACCTCT CCGGAGAACT CTAAGTGGAT ATCATACTAT CCAAAAGTCC GTGGAGTCAA ATGTGGATGG TACTTCTTCA CAGGGTTCTG GGTTTAAGGC TGAAGGTGCC ATGAGCCAGA TGCAAGAGGG TTTGACAGTT GCAGATGAGT CGGCTACTTT CGGTCTGACT GTGAAGAGCA TAAATGACAT CATCAGTAGC CCTGGATGGG AGGAAGCCTT AGAGAAGATG GATGTGCAGT TTTCGACTCT CACTGTCTCT GAAATCATGA GGCGACAACC AAATGTCAAC AGGACGTTCG AGTTCTTCAA GTGGGTCAAA GAAAAGAAGG GTTTCCAACA TACTGCTCGG ACATATAAGA TAATGCTTCA CAGGCTGATG AGTTTTCGAG ATTTCAAGAG GAAAAACTTA GAAACTGTTA GGAACGTCAT CCATCAGTCC TTAGAAGATG GCTTCAGTCC TGGAGTTACC ATCCACACGT TTCTGATCGA TGGATATTGC CAAGTTGGAA ATTTGGATGA AGCCCAGACG CATCTCAACC TCATGGAAAT GAACGGATGT CTGCCTAACG TCGTCACCTA CTCTGCGTTG ATCAATGGTT TTGTCAGGGT TGGAAGGATT GACGACGCCC TGAAAGTTTT TGATGAGATG GAAGCTAAAA ACTGTGAAGC AAATGTAGTC ACATATAGTG CTCTTATTCA TGGGCTTGTA AAGGATACCA GGCGGTTGCC AGAAGCCTGG ACGCTTTTTG AGAAAATGAA AATGAAGGGC TGTGCCCCTA ATTTGATTAC TTATAGTTGT CTCGTTCATG GCCTTGTCAA GGCGGGCCAC TTTGAAGAGG TTAATACCCT ATTAGCTGAA ATGCGAGAGT CTGGTTGCAC TCCGAATCTC TTCATTTACG CTACTCTTAT CAATTACTTT GTTAAAGTGG GAAAGTTAGG CCGGGCATGG CAACTCTTCG GTAGGATGAA GGAAGACGGT TTGGTGCCAA ATTTGTTCGT ATTCACGCCT ATTATCTCAA GCTTGGGGAA GGCAGGCGAG TGGGAATCGG CGCAGGTTCT TCTAGAAGAA ATGAGAGCAT GTGGGTGTCA TCCAGACATG GTCGCCTATA GTGCTCTCAT TGCTGGACTA GTCAAGGCAG GAAGATGGCA AGAGGGCTGC AAGGTTCTTG AGGAAATGCA GAGGTATGGT TGTGTTCCGA CGGAGAGGAC GTACTCTCCT CTTATTGAGG GACTTGTTAA AGTTGGTGAA GTATCCAAGG CCGAAGAACT TTTTGAGGAG ATGATAGCCA AGGGCTGCCA ACCCACTTCT GTCATTCGAC AAGCTCTCAG CAAGAGTACC CTGTCCCTCA ACCAACCGAA GAATGACATT ATTAGTCGAT AACAGAGATC TACCGCTGGA TGGACGAAGT GTAGTGCATC CAGAGCTGCC CGTGGTGTTA GGACGCCTTG AGCTTGAAGG AACATATGAT ATTGGCTGCA TCCAGTAGAC CTTAGACGAC AAGGGAACAA TTATTTCAAA CAGAGGTCAT TGATGGCATG GAGATTTTTT GAGAAGTGTA AGAGGGGTTT GACAAATAAG CATGTTGCAT ACAGCCCCTT TACCACCTCT GAAGGAGGGT CGATCGTGGA GTTGGAGGCC GAGTCTATCT TGAGCTGATG GTTCCACCTG TGAAGACAGT TATTCTAGCT GGATGCGGTG ATTTCAGTTT GAACTTTTTG GCAGGATTAT GCCTAGCATG AGGTGGAACT TATATGACAG ACTTTGCCTC ACAGGTGGGA ATTGCCTCTT TTGCCGACTT GTGATTGCTG TGAGCTTTGC ACTATCAAGC CATTCATTGG AAGCTCAATA GCTGATCGAT AAACCAAAAC AGTCGGTAGG AAGCAACTCT AAAAGGGAAT GCTGTATCAC ACGTGAGAAG CCTACCTTCA TGTATTACTG TAGAACTGTG CTTTGCATTG GAATGCTGAA GGGCAGTGGT TTAACTCTGC GACTCCGTAC TTGTCCTCCT GGAGAAATTA CCTGAGAGCT CTTGTTGCCT TTTCAGTGTA TCAATTTGTT TCTGCTTGAA CTTGAATGTT GTACGAAATT TGTCAGATAT CTGTCTTTTT TTCCTCTATG GTATCTGTTT TTCTGATGTT GTAGATTTGA ATTATAAACA GCCTTGAGTG CAGCCTTGGA CTGCCTTTGT TGCCTCAACG TACTCCGACT GATGCAACGA ACTGAGATTG TGGATGAAGT GAGGTTCACA AGATGCAGAA ATTGTGTGCC TTGGCCTCAT TTTATCTTGC TTGACCAAAG CAGATCTTAG TGGTGGCTTC ACCTATCACC CCTGTGTATA CTGGAATATG CTAAGGTCTA GTCGAGATTT ACTTCAGAAC TAAAATGTTT GTTGTAATGA CAGATATCAG ATGGTACTAT GTTTGTTCGG AGCATCGGAT AGGTGCTAAA ACCCATTGTC TGACAAGCGT TGGGCATTCC GAGTTCCACC ACTTAACTAC TGGAGGCAGC GGTTGCTGCA GTTGGACTTT TGTACAGCCA GATGTTATGT GTTTAAACCT TGTGACATAC TATGAGGTAA CCATTACAAC TAGAATCTGA TCATAACATG TGTAGTCCAA TTTATTGAAG GTTGAGGTCA TGCTATTTAT TGCTTTTCGT CTCGCCTAGT TTCAGTTTAT CGCTTTCGAA AAGTGGTCAA GTTTTGCATA GTTTGTGAAA TGTTCTTCCC GTGTTGCCTT CGTGTGGCAT GACTTGGTGT GAATGCGATG TTTAACAACA AGCGCATCAA ATCCAAATTT TTGTGCCGAT TCCCAACAAA TCCTCGTTTT CCTCTGGCTC AGGATGGGGA CTCTAGCTAT GCCGATTGTG TATGCAAAGT GATTGTTGTC AAACCCCGTT AT |
mRNA UTR + CDS |
| >Mp5g07730.1 GTCTGCTAAT TAATATGGTC GAGCTGTAAA TGAATGTTAA AGTATACTCA CAGGCAGCGA GAAGACGGCC TTTCGATGCT GATGGCATCG TTCAGCGACA AGCAGGGACT CCAGCGACCT ACCGAGGATT TTATTTTAGT CGCTTTTGTA TAAGAAAACA AAACAAATGG AAGAGACCAG CGACAAAGGT GTCACGGCCA TCGAAGAATG TGTGCACATT TCGAGCTGCT CCGCTTGACA GCTCTTCTCC TCCGGACGCG AGGACTAGCG GGCGTTGCAG TATCTACCAT CGCGCAATGG GTGCAGTCGA CGGATCTAAT CAACAGTCTT GGCAACCTTA GTGGCCTCCC TTCAGGATGG CACCTCTTCT CCACTGCCGC AAGCATCAGA TGCTACGATC AGGCATTTCG TGGAAATGTC TGTGCAAGAG TATGGGTGCT TTAGGCACGG GTGGTGCAAA TTGGGTTTCA GAAAACACTT GTCACAGGTG GTACACCGTC GACGTAGAAT GTTTGAGGGA AGGTGATCAG ATAGCTAGCC AAGGAGAAGA GCGTAGCTGC AGCGTTCCAA GTACGAACGG TAGGGTCGTG GATGGGACAG GTGAAAATGT TCGTGCACTT ACTGTGGACA GCTTTGATTC CTGTACAGAA CCTAGTAAAA ATAAAAACCA CGAAGGTTTG GTTAGAAAGG CTAGTTTAGG CTCTTTGACT AGTGGAGGCT TCTCTTGTCT CCAGCAAGAA CAGATTTTCA GATCTCAACC TCTCCGGAGA ACTCTAAGTG GATATCATAC TATCCAAAAG TCCGTGGAGT CAAATGTGGA TGGTACTTCT TCACAGGGTT CTGGGTTTAA GGCTGAAGGT GCCATGAGCC AGATGCAAGA GGGTTTGACA GTTGCAGATG AGTCGGCTAC TTTCGGTCTG ACTGTGAAGA GCATAAATGA CATCATCAGT AGCCCTGGAT GGGAGGAAGC CTTAGAGAAG ATGGATGTGC AGTTTTCGAC TCTCACTGTC TCTGAAATCA TGAGGCGACA ACCAAATGTC AACAGGACGT TCGAGTTCTT CAAGTGGGTC AAAGAAAAGA AGGGTTTCCA ACATACTGCT CGGACATATA AGATAATGCT TCACAGGCTG ATGAGTTTTC GAGATTTCAA GAGGAAAAAC TTAGAAACTG TTAGGAACGT CATCCATCAG TCCTTAGAAG ATGGCTTCAG TCCTGGAGTT ACCATCCACA CGTTTCTGAT CGATGGATAT TGCCAAGTTG GAAATTTGGA TGAAGCCCAG ACGCATCTCA ACCTCATGGA AATGAACGGA TGTCTGCCTA ACGTCGTCAC CTACTCTGCG TTGATCAATG GTTTTGTCAG GGTTGGAAGG ATTGACGACG CCCTGAAAGT TTTTGATGAG ATGGAAGCTA AAAACTGTGA AGCAAATGTA GTCACATATA GTGCTCTTAT TCATGGGCTT GTAAAGGATA CCAGGCGGTT GCCAGAAGCC TGGACGCTTT TTGAGAAAAT GAAAATGAAG GGCTGTGCCC CTAATTTGAT TACTTATAGT TGTCTCGTTC ATGGCCTTGT CAAGGCGGGC CACTTTGAAG AGGTTAATAC CCTATTAGCT GAAATGCGAG AGTCTGGTTG CACTCCGAAT CTCTTCATTT ACGCTACTCT TATCAATTAC TTTGTTAAAG TGGGAAAGTT AGGCCGGGCA TGGCAACTCT TCGGTAGGAT GAAGGAAGAC GGTTTGGTGC CAAATTTGTT CGTATTCACG CCTATTATCT CAAGCTTGGG GAAGGCAGGC GAGTGGGAAT CGGCGCAGGT TCTTCTAGAA GAAATGAGAG CATGTGGGTG TCATCCAGAC ATGGTCGCCT ATAGTGCTCT CATTGCTGGA CTAGTCAAGG CAGGAAGATG GCAAGAGGGC TGCAAGGTTC TTGAGGAAAT GCAGAGGTAT GGTTGTGTTC CGACGGAGAG GACGTACTCT CCTCTTATTG AGGGACTTGT TAAAGTTGGT GAAGTATCCA AGGCCGAAGA ACTTTTTGAG GAGATGATAG CCAAGGGCTG CCAACCCACT TCTGTCATTC GACAAGCTCT CAGCAAGAGT ACCCTGTCCC TCAACCAACC GAAGAATGAC ATTATTAGTC GATAACAGAG ATCTACCGCT GGATGGACGA AGTGTAGTGC ATCCAGAGCT GCCCGTGGTG TTAGGACGCC TTGAGCTTGA AGGAACATAT GATATTGGCT GCATCCAGTA GACCTTAGAC GACAAGGGAA CAATTATTTC AAACAGAGGT CATTGATGGC ATGGAGATTT TTTGAGAAGT GTAAGAGGGG TTTGACAAAT AAGCATGTTG CATACAGCCC CTTTACCACC TCTGAAGGAG GGTCGATCGT GGAGTTGGAG GCCGAGTCTA TCTTGAGCTG ATGGTTCCAC CTGTGAAGAC AGTTATTCTA GCTGGATGCG GTGATTTCAG TTTGAACTTT TTGGCAGGAT TATGCCTAGC ATGAGGTGGA ACTTATATGA CAGACTTTGC CTCACAGATA TCAGATGGTA CTATGTTTGT TCGGAGCATC GGATAGGTGC TAAAACCCAT TGTCTGACAA GCGTTGGGCA TTCCGAGTTC CACCACTTAA CTACTGGAGG CAGCGGTTGC TGCAGTTGGA CTTTTGTACA GCCAGATGTT ATGTGTTTAA ACCTTGTGAC ATACTATGAG GTAACCATTA CAACTAGAAT CTGATCATAA CATGTGTAGT CCAATTTATT GAAGGTTGAG GTCATGCTAT TTATTGCTTT TCGTCTCGCC TAGTTTCAGT TTATCGCTTT CGAAAAGTGG TCAAGTTTTG CATAGTTTGT GAAATGTTCT TCCCGTGTTG CCTTCGTGTG GCATGACTTG GTGTGAATGC GATGTTTAAC AACAAGCGCA TCAAATCCAA ATTTTTGTGC CGATTCCCAA CAAATCCTCG TTTTCCTCTG GCTCAGGATG GGGACTCTAG CTATGCCGAT TGTGTATGCA AAGTGATTGT TGTCAAACCC CGTTAT |
CDS |
| >Mp5g07730.1 ATGAGCCAGA TGCAAGAGGG TTTGACAGTT GCAGATGAGT CGGCTACTTT CGGTCTGACT GTGAAGAGCA TAAATGACAT CATCAGTAGC CCTGGATGGG AGGAAGCCTT AGAGAAGATG GATGTGCAGT TTTCGACTCT CACTGTCTCT GAAATCATGA GGCGACAACC AAATGTCAAC AGGACGTTCG AGTTCTTCAA GTGGGTCAAA GAAAAGAAGG GTTTCCAACA TACTGCTCGG ACATATAAGA TAATGCTTCA CAGGCTGATG AGTTTTCGAG ATTTCAAGAG GAAAAACTTA GAAACTGTTA GGAACGTCAT CCATCAGTCC TTAGAAGATG GCTTCAGTCC TGGAGTTACC ATCCACACGT TTCTGATCGA TGGATATTGC CAAGTTGGAA ATTTGGATGA AGCCCAGACG CATCTCAACC TCATGGAAAT GAACGGATGT CTGCCTAACG TCGTCACCTA CTCTGCGTTG ATCAATGGTT TTGTCAGGGT TGGAAGGATT GACGACGCCC TGAAAGTTTT TGATGAGATG GAAGCTAAAA ACTGTGAAGC AAATGTAGTC ACATATAGTG CTCTTATTCA TGGGCTTGTA AAGGATACCA GGCGGTTGCC AGAAGCCTGG ACGCTTTTTG AGAAAATGAA AATGAAGGGC TGTGCCCCTA ATTTGATTAC TTATAGTTGT CTCGTTCATG GCCTTGTCAA GGCGGGCCAC TTTGAAGAGG TTAATACCCT ATTAGCTGAA ATGCGAGAGT CTGGTTGCAC TCCGAATCTC TTCATTTACG CTACTCTTAT CAATTACTTT GTTAAAGTGG GAAAGTTAGG CCGGGCATGG CAACTCTTCG GTAGGATGAA GGAAGACGGT TTGGTGCCAA ATTTGTTCGT ATTCACGCCT ATTATCTCAA GCTTGGGGAA GGCAGGCGAG TGGGAATCGG CGCAGGTTCT TCTAGAAGAA ATGAGAGCAT GTGGGTGTCA TCCAGACATG GTCGCCTATA GTGCTCTCAT TGCTGGACTA GTCAAGGCAG GAAGATGGCA AGAGGGCTGC AAGGTTCTTG AGGAAATGCA GAGGTATGGT TGTGTTCCGA CGGAGAGGAC GTACTCTCCT CTTATTGAGG GACTTGTTAA AGTTGGTGAA GTATCCAAGG CCGAAGAACT TTTTGAGGAG ATGATAGCCA AGGGCTGCCA ACCCACTTCT GTCATTCGAC AAGCTCTCAG CAAGAGTACC CTGTCCCTCA ACCAACCGAA GAATGACATT ATTAGTCGAT AA |
Protein |
| >Mp5g07730.1 MSQMQEGLTV ADESATFGLT VKSINDIISS PGWEEALEKM DVQFSTLTVS EIMRRQPNVN RTFEFFKWVK EKKGFQHTAR TYKIMLHRLM SFRDFKRKNL ETVRNVIHQS LEDGFSPGVT IHTFLIDGYC QVGNLDEAQT HLNLMEMNGC LPNVVTYSAL INGFVRVGRI DDALKVFDEM EAKNCEANVV TYSALIHGLV KDTRRLPEAW TLFEKMKMKG CAPNLITYSC LVHGLVKAGH FEEVNTLLAE MRESGCTPNL FIYATLINYF VKVGKLGRAW QLFGRMKEDG LVPNLFVFTP IISSLGKAGE WESAQVLLEE MRACGCHPDM VAYSALIAGL VKAGRWQEGC KVLEEMQRYG CVPTERTYSP LIEGLVKVGE VSKAEELFEE MIAKGCQPTS VIRQALSKST LSLNQPKNDI ISR |