Mp5g07870



Description

Annotation

Database ID Description
SMART SM00332 PP2C_4
Pfam PF00481 Protein phosphatase 2C
Coils Coil Coil
CDD cd00143 PP2Cc
SUPERFAMILY SSF111352 Ammonium transporter
Gene3D G3DSA:1.10.3430.10 Ammonium transporter AmtB like domains
PANTHER PTHR11730 AMMONIUM TRANSPORTER
Gene3D G3DSA:3.60.40.10 -
Pfam PF00909 Ammonium Transporter Family
ProSiteProfiles PS51746 PPM-type phosphatase domain profile.
SUPERFAMILY SSF81606 PP2C-like
MobiDBLite mobidb-lite consensus disorder prediction
KEGG K03320 ammonium transporter, Amt family
KEGG K01102 pyruvate dehydrogenase phosphatase [EC:3.1.3.43]
KOG KOG0682 Ammonia permease; [P]
KOG KOG0700 Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase; [T]
MapolyID Mapoly0198s0006 -
GO GO:0072488 ammonium transmembrane transport
GO GO:0005887 plasma membrane
GO GO:0008519 ammonium channel activity
GO GO:0097272 ammonium homeostasis
GO GO:0016020 membrane

Nomenclature

Gene symbol Product Transcript ID Status
MpPP2CD-AMT AMT transporters, phosphatase Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp5g07870.1 chr5:10893950..10901261 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp5g07870 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp5g07870 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.