Mp5g07890



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR12081 TRANSCRIPTION FACTOR E2F
SUPERFAMILY SSF46785 "Winged helix" DNA-binding domain
Gene3D G3DSA:1.10.10.10 -
Pfam PF02319 E2F/DP family winged-helix DNA-binding domain
SMART SM01372 E2F_TDP_2
KOG KOG2578 Transcription factor E2F/dimerization partner (TDP)-like proteins; C-term missing; [K]
MapolyID Mapoly0198s0008 -
GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO GO:0005667 transcription regulator complex
GO GO:0006357 regulation of transcription by RNA polymerase II
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0090575 RNA polymerase II transcription regulator complex
GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific

Nomenclature

Gene symbol Product Transcript ID Status
MpDEL2 transcription factor, E2F/DP/DEL Published

Associated Literature (AI-based literature mining, Beta-version)

transcription factor, E2F/DP/DEL (from nomenclature)

0 core 2 peripheral

Romani, F., et al. (2026) · The Plant Cell  research experimental comparator
DEL/E2F-like factor; cell-cycle gene inventory.
Ren, X., et al. (2024) · Plant Cell  research experimental tool
Antheridium-expressed gene used as a marker; activated in MpGLID-overexpressing transgenics.

Transcript models

Transcript ID Location Sequences Extract region
Mp5g07890.1 chr5:10931831..10943623 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g07890.2 chr5:10931831..10943623 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp5g07890 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp5g07890 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.