Mp5g08940



Description

Annotation

Database ID Description
ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1.
PANTHER PTHR11654 OLIGOPEPTIDE TRANSPORTER-RELATED
SUPERFAMILY SSF103473 MFS general substrate transporter
Pfam PF00854 POT family
Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains
KOG KOG1237 H+/oligopeptide symporter; [E]
MapolyID Mapoly0095s0064 -
GO GO:0055085 transmembrane transport
GO GO:0022857 transmembrane transporter activity
GO GO:0016020 membrane
GO GO:0006857 oligopeptide transport

Nomenclature

Gene symbol Product Transcript ID Status
MpNPF24 NPF transporter Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp5g08940.1 chr5:12051004..12054961 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp5g08940 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp5g08940 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.