Mp5g09290



Description

Annotation

Database ID Description
Coils Coil Coil
PANTHER PTHR23068 DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases
ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site.
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF11926 Domain of unknown function (DUF3444)
Pfam PF00145 C-5 cytosine-specific DNA methylase
ProSiteProfiles PS51679 C-5 cytosine-specific DNA methylase (Dnmt) domain profile.
KOG KOG0919 C-5 cytosine-specific DNA methylase; [K]
MapolyID Mapoly0095s0030 -
GO GO:0008168 methyltransferase activity
GO GO:0005634 nucleus

Nomenclature

Gene symbol Product Transcript ID Status
MpDNMT3b C-5 cytosine-specific DNA methylase Published

Associated Literature (AI-based literature mining, Beta-version)

C-5 cytosine-specific DNA methylase (from nomenclature)

0 core 1 peripheral

Walker, J., et al. (2025) · Cell 188: doi: 10.1016/j.cell.2025.1003.1014  research experimental comparator
DNMT3-type (5mC) methyltransferase (Mp5g09290); compared to the N4C system.

Transcript models

Transcript ID Location Sequences Extract region
Mp5g09290.1 chr5:12514895..12518322 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp5g09290 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp5g09290 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.