Mp5g09660
Description
Annotation
| Database | ID | Description |
|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| PANTHER | PTHR35298 | DNA-BINDING PROTEIN S1FA2 |
| Pfam | PF04689 | DNA binding protein S1FA |
| MapolyID | Mapoly0048s0104 | - |
| GO | GO:0006355 | regulation of DNA-templated transcription |
| GO | GO:0005634 | nucleus |
| GO | GO:0003677 | DNA binding |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpS1Fa-like | transcription factor, S1Fa-like | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp5g09660 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp5g09660.1 CACAAGGAGA CCGACATTAC CAGAAAGAGA GCCAACGATC AGAACCGGGA TAACGCGCAG CAGCCAGCGG GACGGCTGAA GTTCACAAGA CGCGTCACAG TTTAGTTGTC CGAAAGGCGG ACCTGCGCTG CGAAGTCATC TAGCGCTCGC ACGTCTCTTC CTTCTTCCCC TTCAATTCCT TTCCTTTCCT TCACTCCGCT TCAGTGCAGT GACCACTACT ACTCACAGGG AGGCCACGGT TGCCAACTCT TCACCCTGCT CAAGGAACTC TGCCTCGTTC TGCCCCCAAC CCCACTCTCA TACCCAACTC TCATACCCAC ACACACCGCA GCGCTGTCGA GAGGGGAGAA GAAGCGCGCT GGAGGAGAGA GAGCAAGGCA GGGGCCATGG CCGAAGAGGA TTTTGATGCC TCTAGTTTTA CAAGCCAGGT TTGTGCAATA AACTCTTTCT TTTCTCATCT TTTCTTTTTT CTGTCTCTTC TCTGAGCTTG CGAGATTCTT GTGAAAGGAA TTTAAGGCCT GTTTTGTTCG CTGGGCCTTT TGCCTGCTTT GGGGCGGAAG TTGTTTTTTG TGACTGAGGA TCCGGGCTCT GGGAAAGCGG AGGTTATTAC CGGCTTTTGG CATGTTGATC CGATCGAGCG ACTGAGACTG GGACTGGTGG ATGCTGTTCT GGCTCGGCTG TGACCGAGAT GCAATCCGCT TGCCTAGGGT TTCTCTCCTG CTCTTGCACA ACGCGCATGT CACCCCTCCC CTCGCCCTGA CGAACTAGTC ATTTCGATTG GGGTTGCTTC TATTTCAGTT TAACGTCGAG AATGGAGTAC GGGAAGCTTA GCGAGGGAGG GCATTGAGGA CATACTATTT TTCTTTCTCT GCGTCGAGTG GTCCGATCTG AGACTGGGTG TTTTCGTACT GTTATAATGG GAGTAGAACC GAGCTTGTAC ATCTATTTTG CCCGCCGGAT GTTATGTACC GTGCATTGCA GTCAGATCTT GCACTTGTGT GTTTGAGAAC TTGACGTTTG CAATCAAAGA CATTACAGGG CCATATTTAA GTTGCTACGG TTTTGATGGA ATAAATGATA TGGTTCACAG TAATGTACGT AAGTGTGCAC TCGTACGTTA TGAGAATATA TGTATCCATT TGTGACGGAA CCATGAGAGC TCGTATTTCC GTTTAGCTTA TCAAGAACTA TATGCACTGA TATCTGAAGC TCCGTATCTT TCAGTCCATC CCCCCCTAAT GATCTTCATC CCCGATCCTC GATTGAGTGG TACGTAGGAG GGTCTATTTA GACCTAGGGA TTGTATTCAG ATATGCAAGG CTATTGCGAA GTTTTGCAAA AGCTTCTGGC ATCCAAGAAG TGCAGCTAAG CTACATTTCG ATTTTTTCGT ATACTGTACT ATACTGCCGG CGGAATTTTG ACGTTGGCCT TCAGTCTACT TTTGCTCACA AAGTTGACAT ACCTTCAAAT GGTGAGCAGA GTGGATGTTG ACATCTCATG CTCCATCTCT TGCTTTTTGT GTTGCTTTTA TCCCCTATTC TGATGACTAA TTGGGATTAT TCTTTCTTCC CTGAAGTTGT GGCGTCGTCT TTTAGCACTG GTAGCAATAA CCTTGAAGTT GGTAAGTCTG TCGTAAAATG GCTGCTTCCA TTTTTGTTGG GGCTGGATAC TGTTGATGGA AAGTGAGCAC TGATAATGAG AAGAAAAAGC TGGAGGCTTT CAGCAGCCAA TCATTGCTCA GAGTTCTGGC CGCAGATGTT TGTCCAGTTG TCCCCACATA CTGCACTCAC CCTGTAGAAA GTCGACGATG GCTTCATCAA ATTAACAACG AAGATTATAA GCTCAAATTA TTGTTATTAT ATCCACTCGG CTAACTTCCT TCCGGACTGC CACAAGCTAA AGCAACTTTG ATTTGGCCTT GTCTTTTCAT CTACAGGGAA CATTCTCTAC CAAGGCTCCA GATCAAGGCT TCAACCCGGC GCTGATAGTG CTGTTGGTGG TGGTTGGAAC CGTTTTAGTC TTTATTGTTG GAAATTACGC ATTGTTTTCT TATGCTAAAA AGACATTGCC ACCAAGAAAG AAGAAACCAG TGTCAAAGAA GAAGCTGAAA AGAGAACGAC TGAAAGCAGG TGTTGCTCCT GCTGGTGACT AAGCTGCGTG CCTCTTCTGG ATCCAGGTTC ATGACTATGA TCTAGGTTCA AAATTGTTCC GGAGATTGAA AGCTAGGTCT TTCCATGTAC AATTACAGGC ACGTTGAAAA ATTTATCAGA TTATTGGAAA GCTGCTGTAG AAGGGCTGGT CTCTCCTTTC TATGGATCAA CTTATCCTGC TGCTTGACTA GCCGGGCGCT CTGTGTTGTA ATTGGACAAA AAACACTTAT CATGAAGCCG ATGGCGTCTG TGTCGCACGT ACTACACCGC TTTGCTTACA GGTTTTACTG GGATCAGTTG TAGCTAGTCT GCTCGCTGTC CTATTTCTCG CAAACCGAGA ATGTCCCTTC GCACAGAGGT TTTGACGCCT GTGCTGCCTT TCAAAATTTT GACTATACAT AAAGGTGACC ACTATTCATG TCGC |
mRNA UTR + CDS |
| >Mp5g09660.1 CACAAGGAGA CCGACATTAC CAGAAAGAGA GCCAACGATC AGAACCGGGA TAACGCGCAG CAGCCAGCGG GACGGCTGAA GTTCACAAGA CGCGTCACAG TTTAGTTGTC CGAAAGGCGG ACCTGCGCTG CGAAGTCATC TAGCGCTCGC ACGTCTCTTC CTTCTTCCCC TTCAATTCCT TTCCTTTCCT TCACTCCGCT TCAGTGCAGT GACCACTACT ACTCACAGGG AGGCCACGGT TGCCAACTCT TCACCCTGCT CAAGGAACTC TGCCTCGTTC TGCCCCCAAC CCCACTCTCA TACCCAACTC TCATACCCAC ACACACCGCA GCGCTGTCGA GAGGGGAGAA GAAGCGCGCT GGAGGAGAGA GAGCAAGGCA GGGGCCATGG CCGAAGAGGA TTTTGATGCC TCTAGTTTTA CAAGCCAGGG AACATTCTCT ACCAAGGCTC CAGATCAAGG CTTCAACCCG GCGCTGATAG TGCTGTTGGT GGTGGTTGGA ACCGTTTTAG TCTTTATTGT TGGAAATTAC GCATTGTTTT CTTATGCTAA AAAGACATTG CCACCAAGAA AGAAGAAACC AGTGTCAAAG AAGAAGCTGA AAAGAGAACG ACTGAAAGCA GGTGTTGCTC CTGCTGGTGA CTAAGCTGCG TGCCTCTTCT GGATCCAGGT TCATGACTAT GATCTAGGTT CAAAATTGTT CCGGAGATTG AAAGCTAGGT CTTTCCATGT ACAATTACAG GCACGTTGAA AAATTTATCA GATTATTGGA AAGCTGCTGT AGAAGGGCTG GTCTCTCCTT TCTATGGATC AACTTATCCT GCTGCTTGAC TAGCCGGGCG CTCTGTGTTG TAATTGGACA AAAAACACTT ATCATGAAGC CGATGGCGTC TGTGTCGCAC GTACTACACC GCTTTGCTTA CAGGTTTTAC TGGGATCAGT TGTAGCTAGT CTGCTCGCTG TCCTATTTCT CGCAAACCGA GAATGTCCCT TCGCACAGAG GTTTTGACGC CTGTGCTGCC TTTCAAAATT TTGACTATAC ATAAAGGTGA CCACTATTCA TGTCGC |
CDS |
| >Mp5g09660.1 ATGGCCGAAG AGGATTTTGA TGCCTCTAGT TTTACAAGCC AGGGAACATT CTCTACCAAG GCTCCAGATC AAGGCTTCAA CCCGGCGCTG ATAGTGCTGT TGGTGGTGGT TGGAACCGTT TTAGTCTTTA TTGTTGGAAA TTACGCATTG TTTTCTTATG CTAAAAAGAC ATTGCCACCA AGAAAGAAGA AACCAGTGTC AAAGAAGAAG CTGAAAAGAG AACGACTGAA AGCAGGTGTT GCTCCTGCTG GTGACTAA |
Protein |
| >Mp5g09660.1 MAEEDFDASS FTSQGTFSTK APDQGFNPAL IVLLVVVGTV LVFIVGNYAL FSYAKKTLPP RKKKPVSKKK LKRERLKAGV APAGD |