Mp5g09710
Description
Annotation
| Database | ID | Description |
|---|---|---|
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain |
| Gene3D | G3DSA:4.10.280.10 | - |
| SMART | SM00353 | finulus |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| CDD | cd18917 | bHLH_AtSAC51_like |
| PANTHER | PTHR36066 | TRANSCRIPTION FACTOR BHLH145 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. |
| MapolyID | Mapoly0048s0099 | - |
| GO | GO:0046983 | protein dimerization activity |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpBHLH42 | transcription factor, bHLH | Published |
Associated Literature (AI-based literature mining, Beta-version)
transcription factor, bHLH (from nomenclature)
0 core 1 peripheral
Furumoto, T., et al. (2024)
· Plant & Cell Physiology research experimental comparator
Sole M. polymorpha homolog of Arabidopsis SAC51, examined as a potential thermospermine-responsive target. Its 5' leader showed no response to thermospermine in a reporter assay, indicating molecular mechanisms distinct from vascular plants.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp5g09710 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp5g09710.1 CCAATTGCCC TGTGCCCTCC CAGTCAGATC GCGCTCGCCC GGAACCCGTC TCCGCTCCGC TCCTCCTTCC CCTCCTCTTC TCACGCGACC AACGGAACCA ACCTCTCGAC GATTCGTTGG GCTTTTTTTA TAAAGCAGTA TCTTCAGCAC TAACACCGCC TTTTTCCCTG CAGGTGCCTG TCCCAACTCT ACAAATCTCA AGTGGATGTG TCTTTTGCGC TGAACTGTTG AGGCGTTCGT TCCCAGACTC TCTTGCTCGC TCCGCTCCAC TCACCGGCGG AATTCTTCGT TCATTCTCAG CTTCGGGGTT CTCTCGATTG CAGGTGTCAC TACTCGTAGA TGGTTGCACA CGCCGCCTTT TTTCACTCTA GCAAATCATT GTATTGCTCG ACGCCGGTCA TCCTACACTA CACTACTCCT TCACCTTTAA ATGCGAACAA CAGCAGGAAA CACATGATTT CGTTCGCGGC GTCGCATTCA CAGACTGACA TTTTGTGACA TACATCATTC TCGCTGAAAT CTGCTCAACG TTTCCAGCTG CCGTGTCGCC GCCCGTCCGG ATTACTTTCG GACTGTAACA TATCTCTCGG GGCGTACGTG AAGACTGGAA ATGTTCGAGG ATTTGGATTT GGGTACAGCT TGTAAGAATT TTCAGAATCT GGCCGCTGAT TTAGTAGAGC GGTGGCAGTC CCAGAAACCG TGTACAGAGT CGGGACGTTT TAACTACATC ATGTTTGATC AGAGCGGGGG AAAGGGGCGG ATCTTCCAGC ACCCTTCTCG CCTGCTGCAC GAGTTCCCGA CGAGCTCTTC GTCGCCTCCG CAGCCTAACT CTCCAGACTT GTACCAGGAC ATGTCTCTCC AGGAGTTCGA GGACACTCTT CTGAGGAACT CTGTGCAGGA CAAATGCGAT CCCCGAATGG CGGCCTGCCG AGAGACGGTG GCTTCGGCCT ACGCTGCAGT CCAGCAGCAG CAGCAAGACA AAAACGACGA TCAGATTCGC CATCAAAATC CGACAGCTTT GTTTCCCGAG GAGGTTTACA GCGCATTTCA AGCGAGCGAG GAGGAATCCA GCCGAGCCGC AGGAGGAGGC TACCTGTACG AGGATGCCGA CGACTTGGAA GCGCTGCTAG GATGCTCCGA CGAGGAAGAG AGCATCACCG GCAATGCGCC GAGCAGCGAA TTGACCTGCC ATTTCGGCCT TCAGGAGGAC GACAACATCC GACCGTGCGA GCCTTCGTCG AGGAAGAGGC CGTGCGTGTT GGACGAGGAG GTCGACTCGA AATTCAAGCG GCAGAGGTCG CAGGAGGAGG AGGAAGAGGA AGTCGAGGAC ATTTGCATCG GCACCTGCTC GTCGAGTGTC TCGGTGGTCG ATGCCTTCAG TGGCGATTCC CTGGGTCCCC CTTGCGCCCT GGAGAGCGAA GCAGACGACT GTCTGGACGA GTCTGCGCTC GAGCTGCAAA TGCTGTGCGA CGACTTCGGC TACGAGATGC CTGAGGAGCA ACAATGTAGC TCATGCAGCA AGGAGGACGG AGACGAAGGC GACTCGATCT CATCCGGCTC GGCCAGGAAG TCTAGGCGAG ATAAGATTAA GAAGACCGTG AAGCTCTTGA GAAACATCAT TCCAGGCGGA GATTGCATGG ACACGGCCAT CGTTCTGGAC GAGGCTATAC ACTATGTGAA GTTGCTCCAA TTGCAGGTTC AGACTTTGGA GGCCAAGAGG CTCGTCGAGA GAGTTCGGTG ACCCTTGGGG CTCTTATCTG CTCGAATCTT CATCCTCTTC CTACCTAATT AGTCTTATTT CTCGGCGAGG GTTTAGCCTA GTGAACGCAC GCCCCGAATA TAGAGAGGCT CATACTCATC TCCCCGCTTT GATCACTACA CCCTCCCCCA CCCTTAGGAA TCTTGTGAAA AGCTCTCTCT TGTGAAAATT TCTCTCCTTT TAATCCCGAC ATTGTAAGCA TGTTAACATT CAAACGAAAT TTTTTTTTTG TGTTCCAGCA CTTCTCGCGC TTAGGGTCAT TTTCAGATGA GAGGGCATCG TGAAGTCACT ACTGTCTTCG CGTTATGCCC TGTGAAATCG CGGAACCCCT CGTTCACTCA CGCAATTTGC TCAATGTTGC CCTCAGGCTA TTTGTCAATA TTCACTAAAT GC |
mRNA UTR + CDS |
| >Mp5g09710.1 CCAATTGCCC TGTGCCCTCC CAGTCAGATC GCGCTCGCCC GGAACCCGTC TCCGCTCCGC TCCTCCTTCC CCTCCTCTTC TCACGCGACC AACGGAACCA ACCTCTCGAC GATTCGTTGG GCTTTTTTTA TAAAGCAGTA TCTTCAGCAC TAACACCGCC TTTTTCCCTG CAGGTGCCTG TCCCAACTCT ACAAATCTCA AGTGGATGTG TCTTTTGCGC TGAACTGTTG AGGCGTTCGT TCCCAGACTC TCTTGCTCGC TCCGCTCCAC TCACCGGCGG AATTCTTCGT TCATTCTCAG CTTCGGGGTT CTCTCGATTG CAGGTGTCAC TACTCGTAGA TGGTTGCACA CGCCGCCTTT TTTCACTCTA GCAAATCATT GTATTGCTCG ACGCCGGTCA TCCTACACTA CACTACTCCT TCACCTTTAA ATGCGAACAA CAGCAGGAAA CACATGATTT CGTTCGCGGC GTCGCATTCA CAGACTGACA TTTTGTGACA TACATCATTC TCGCTGAAAT CTGCTCAACG TTTCCAGCTG CCGTGTCGCC GCCCGTCCGG ATTACTTTCG GACTGTAACA TATCTCTCGG GGCGTACGTG AAGACTGGAA ATGTTCGAGG ATTTGGATTT GGGTACAGCT TGTAAGAATT TTCAGAATCT GGCCGCTGAT TTAGTAGAGC GGTGGCAGTC CCAGAAACCG TGTACAGAGT CGGGACGTTT TAACTACATC ATGTTTGATC AGAGCGGGGG AAAGGGGCGG ATCTTCCAGC ACCCTTCTCG CCTGCTGCAC GAGTTCCCGA CGAGCTCTTC GTCGCCTCCG CAGCCTAACT CTCCAGACTT GTACCAGGAC ATGTCTCTCC AGGAGTTCGA GGACACTCTT CTGAGGAACT CTGTGCAGGA CAAATGCGAT CCCCGAATGG CGGCCTGCCG AGAGACGGTG GCTTCGGCCT ACGCTGCAGT CCAGCAGCAG CAGCAAGACA AAAACGACGA TCAGATTCGC CATCAAAATC CGACAGCTTT GTTTCCCGAG GAGGTTTACA GCGCATTTCA AGCGAGCGAG GAGGAATCCA GCCGAGCCGC AGGAGGAGGC TACCTGTACG AGGATGCCGA CGACTTGGAA GCGCTGCTAG GATGCTCCGA CGAGGAAGAG AGCATCACCG GCAATGCGCC GAGCAGCGAA TTGACCTGCC ATTTCGGCCT TCAGGAGGAC GACAACATCC GACCGTGCGA GCCTTCGTCG AGGAAGAGGC CGTGCGTGTT GGACGAGGAG GTCGACTCGA AATTCAAGCG GCAGAGGTCG CAGGAGGAGG AGGAAGAGGA AGTCGAGGAC ATTTGCATCG GCACCTGCTC GTCGAGTGTC TCGGTGGTCG ATGCCTTCAG TGGCGATTCC CTGGGTCCCC CTTGCGCCCT GGAGAGCGAA GCAGACGACT GTCTGGACGA GTCTGCGCTC GAGCTGCAAA TGCTGTGCGA CGACTTCGGC TACGAGATGC CTGAGGAGCA ACAATGTAGC TCATGCAGCA AGGAGGACGG AGACGAAGGC GACTCGATCT CATCCGGCTC GGCCAGGAAG TCTAGGCGAG ATAAGATTAA GAAGACCGTG AAGCTCTTGA GAAACATCAT TCCAGGCGGA GATTGCATGG ACACGGCCAT CGTTCTGGAC GAGGCTATAC ACTATGTGAA GTTGCTCCAA TTGCAGGTTC AGACTTTGGA GGCCAAGAGG CTCGTCGAGA GAGTTCGGTG ACCCTTGGGG CTCTTATCTG CTCGAATCTT CATCCTCTTC CTACCTAATT AGTCTTATTT CTCGGCGAGG GTTTAGCCTA GTGAACGCAC GCCCCGAATA TAGAGAGGCT CATACTCATC TCCCCGCTTT GATCACTACA CCCTCCCCCA CCCTTAGGAA TCTTGTGAAA AGCTCTCTCT TGTGAAAATT TCTCTCCTTT TAATCCCGAC ATTGTAAGCA TGTTAACATT CAAACGAAAT TTTTTTTTTG TGTTCCAGCA CTTCTCGCGC TTAGGGTCAT TTTCAGATGA GAGGGCATCG TGAAGTCACT ACTGTCTTCG CGTTATGCCC TGTGAAATCG CGGAACCCCT CGTTCACTCA CGCAATTTGC TCAATGTTGC CCTCAGGCTA TTTGTCAATA TTCACTAAAT GC |
CDS |
| >Mp5g09710.1 ATGTTCGAGG ATTTGGATTT GGGTACAGCT TGTAAGAATT TTCAGAATCT GGCCGCTGAT TTAGTAGAGC GGTGGCAGTC CCAGAAACCG TGTACAGAGT CGGGACGTTT TAACTACATC ATGTTTGATC AGAGCGGGGG AAAGGGGCGG ATCTTCCAGC ACCCTTCTCG CCTGCTGCAC GAGTTCCCGA CGAGCTCTTC GTCGCCTCCG CAGCCTAACT CTCCAGACTT GTACCAGGAC ATGTCTCTCC AGGAGTTCGA GGACACTCTT CTGAGGAACT CTGTGCAGGA CAAATGCGAT CCCCGAATGG CGGCCTGCCG AGAGACGGTG GCTTCGGCCT ACGCTGCAGT CCAGCAGCAG CAGCAAGACA AAAACGACGA TCAGATTCGC CATCAAAATC CGACAGCTTT GTTTCCCGAG GAGGTTTACA GCGCATTTCA AGCGAGCGAG GAGGAATCCA GCCGAGCCGC AGGAGGAGGC TACCTGTACG AGGATGCCGA CGACTTGGAA GCGCTGCTAG GATGCTCCGA CGAGGAAGAG AGCATCACCG GCAATGCGCC GAGCAGCGAA TTGACCTGCC ATTTCGGCCT TCAGGAGGAC GACAACATCC GACCGTGCGA GCCTTCGTCG AGGAAGAGGC CGTGCGTGTT GGACGAGGAG GTCGACTCGA AATTCAAGCG GCAGAGGTCG CAGGAGGAGG AGGAAGAGGA AGTCGAGGAC ATTTGCATCG GCACCTGCTC GTCGAGTGTC TCGGTGGTCG ATGCCTTCAG TGGCGATTCC CTGGGTCCCC CTTGCGCCCT GGAGAGCGAA GCAGACGACT GTCTGGACGA GTCTGCGCTC GAGCTGCAAA TGCTGTGCGA CGACTTCGGC TACGAGATGC CTGAGGAGCA ACAATGTAGC TCATGCAGCA AGGAGGACGG AGACGAAGGC GACTCGATCT CATCCGGCTC GGCCAGGAAG TCTAGGCGAG ATAAGATTAA GAAGACCGTG AAGCTCTTGA GAAACATCAT TCCAGGCGGA GATTGCATGG ACACGGCCAT CGTTCTGGAC GAGGCTATAC ACTATGTGAA GTTGCTCCAA TTGCAGGTTC AGACTTTGGA GGCCAAGAGG CTCGTCGAGA GAGTTCGGTG A |
Protein |
| >Mp5g09710.1 MFEDLDLGTA CKNFQNLAAD LVERWQSQKP CTESGRFNYI MFDQSGGKGR IFQHPSRLLH EFPTSSSSPP QPNSPDLYQD MSLQEFEDTL LRNSVQDKCD PRMAACRETV ASAYAAVQQQ QQDKNDDQIR HQNPTALFPE EVYSAFQASE EESSRAAGGG YLYEDADDLE ALLGCSDEEE SITGNAPSSE LTCHFGLQED DNIRPCEPSS RKRPCVLDEE VDSKFKRQRS QEEEEEEVED ICIGTCSSSV SVVDAFSGDS LGPPCALESE ADDCLDESAL ELQMLCDDFG YEMPEEQQCS SCSKEDGDEG DSISSGSARK SRRDKIKKTV KLLRNIIPGG DCMDTAIVLD EAIHYVKLLQ LQVQTLEAKR LVERVR |