Mp5g11460
Description
Annotation
| Database | ID | Description |
|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Pfam | PF03195 | Lateral organ boundaries (LOB) domain |
| Coils | Coil | Coil |
| ProSiteProfiles | PS50891 | LOB domain profile. |
| PANTHER | PTHR31301 | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED |
| MapolyID | Mapoly0093s0069 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpASLBD12 | transcription factor, ASL/LBD | Published |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp5g11460 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp5g11460.1 TAATTAGCAA TCGCCGTCAG AGAAAGTATA AGTGTCATGA TGTACTGGTC AGAAGTTATT CGCACCCATC GTACAGGGCT CCGCCGGATT GCTCCCTGGT ATTGTGCTTT CATCGAGCAT GGGCTCCCCT CCGAACGCAG CGTGCGCTGC CTGCAAGTTC CAGCGTCGGA AATGCGCTGT GGACTGCTTG CTGGCGCCGT GGTTCCCTCC GGACCAGCCC AGGCGCTTTG CCAACGCGCA CAGGCTCTTC GGAGTAGCGA ACATATTGAG ACTGATTCGA GAGAATCGCA GCTCCGTCGA CGATCTGATG AAGAGTGTCT GCTTCGAGTC TGACACTCGG GAACGAGATC CTGTCAATGG AGCGTACGGG ACATTACGAC TTCTTCAGCG AGAGGCCGAG AGACTGGAGG AGAACAGAAC GGCTTTGTCC GAGAAGCTAA GGATACTGTT GCTGGAGGAT GCTGCTGCCA ACAATGTCAA CAACCCACCG CATACCCATA CTGCCTACAA CGCGGTGCCT CCAGAGTATT ACGCACATGC ACGGCCTACT CAGGTCGCCT TTGCAGAGAC AACGCCAGCG CTGCAAGACA ACGATGTTTA TCATATGCAG CACCACCACC ACCAGCATCA ACAACAGCAG CATCAGCATC ATCAGCAGCA ACAGCAGCCG CATCAACAAC AGCAACAACT GCATTATATG CAGATGCCCC AGCATCAGAT GCCTTCTCTA GAGTATTTTG TTAATTTCAA CGCCAGTGGT GGCTTTACTC CGGTGCAAGC AACGGACGCG TCGACCTCTC ATCCACATAT GCACCTCACG GATAGAAGTG CAGAAATGCC TCTTCATCGG GCCTCTTCTT CGTACACTGG ACCAGCAGCG AGAGACTTTC TCTCCCTCAC AAACAACTCT AACTCTAACT CTCGCTTTTA TTGACATTTG TCGTAATTGC AGATAATGTA ATTGTACATA ATCGTTACTC CTCCACAGCA ATAGATCTAT CCAGACGCAC ATGCTGTGTC TTCCCAGGAT TTTTGTTTAG ATAGCTCCTC CACGGCATTA GATCTATCCA GGATTTTTGT TTAGATAGCT CCTCCACAGC AATAGATCTA TCCAGACGCA CATGCTGTGT CTTCCCAGTG CAGAAGTGCC TCTTCATCGG GCCTCTTCTT CGTACACTGG AACAGCAGCG AGAGACTTTC TGTCCCTCAC AAACAACTCT CGCTTTGATT GACTTTTGTT GTAATTGCAG ATAATACAGA ATCTGTAGCT TTAGATCAGG AATCTAGGTA CGACCATCAC TCACTCCACC GTACTGAGGA AGAGGGAGTT ATGGCCTACG ACACATAAGA ACAGTACAGA CGAAGAGCGA AAAGGCGGAT GAGAGCAAAA AAAACTTTGG AGACAGAATA CAATGAATGA ATACAAAAAA GTACACAAAG GACAAAGAGT GTGTATCTCC GATGTCAAGA GGTTTCCCAT CTATGGTGAT CCTGTCGTAG CCCCACGCCA TCTTGCCACT TGGGTTTCAT CTCTCCTCTT TGTTATGTCT CTCGCTTTTC CATCTCAAGA AGAGAGAAGA ATATGCTCTT GGGAGTTCCG GGATTTCACA AGGAGATCCG ATCGAGCCAT TGAGTACAGT GCTAGGCAGC GGAGGTCGTG TTCAGTTCTT AATCCTTTGG ATAGATTCAT CGTCAA |
mRNA UTR + CDS |
| >Mp5g11460.1 TAATTAGCAA TCGCCGTCAG AGAAAGTATA AGTGTCATGA TGTACTGGTC AGAAGTTATT CGCACCCATC GTACAGGGCT CCGCCGGATT GCTCCCTGGT ATTGTGCTTT CATCGAGCAT GGGCTCCCCT CCGAACGCAG CGTGCGCTGC CTGCAAGTTC CAGCGTCGGA AATGCGCTGT GGACTGCTTG CTGGCGCCGT GGTTCCCTCC GGACCAGCCC AGGCGCTTTG CCAACGCGCA CAGGCTCTTC GGAGTAGCGA ACATATTGAG ACTGATTCGA GAGAATCGCA GCTCCGTCGA CGATCTGATG AAGAGTGTCT GCTTCGAGTC TGACACTCGG GAACGAGATC CTGTCAATGG AGCGTACGGG ACATTACGAC TTCTTCAGCG AGAGGCCGAG AGACTGGAGG AGAACAGAAC GGCTTTGTCC GAGAAGCTAA GGATACTGTT GCTGGAGGAT GCTGCTGCCA ACAATGTCAA CAACCCACCG CATACCCATA CTGCCTACAA CGCGGTGCCT CCAGAGTATT ACGCACATGC ACGGCCTACT CAGGTCGCCT TTGCAGAGAC AACGCCAGCG CTGCAAGACA ACGATGTTTA TCATATGCAG CACCACCACC ACCAGCATCA ACAACAGCAG CATCAGCATC ATCAGCAGCA ACAGCAGCCG CATCAACAAC AGCAACAACT GCATTATATG CAGATGCCCC AGCATCAGAT GCCTTCTCTA GAGTATTTTG TTAATTTCAA CGCCAGTGGT GGCTTTACTC CGGTGCAAGC AACGGACGCG TCGACCTCTC ATCCACATAT GCACCTCACG GATAGAAGTG CAGAAATGCC TCTTCATCGG GCCTCTTCTT CGTACACTGG ACCAGCAGCG AGAGACTTTC TCTCCCTCAC AAACAACTCT AACTCTAACT CTCGCTTTTA TTGACATTTG TCGTAATTGC AGATAATGTA ATTGTACATA ATCGTTACTC CTCCACAGCA ATAGATCTAT CCAGACGCAC ATGCTGTGTC TTCCCAGGAT TTTTGTTTAG ATAGCTCCTC CACGGCATTA GATCTATCCA GGATTTTTGT TTAGATAGCT CCTCCACAGC AATAGATCTA TCCAGACGCA CATGCTGTGT CTTCCCAGTG CAGAAGTGCC TCTTCATCGG GCCTCTTCTT CGTACACTGG AACAGCAGCG AGAGACTTTC TGTCCCTCAC AAACAACTCT CGCTTTGATT GACTTTTGTT GTAATTGCAG ATAATACAGA ATCTGTAGCT TTAGATCAGG AATCTAGGTA CGACCATCAC TCACTCCACC GTACTGAGGA AGAGGGAGTT ATGGCCTACG ACACATAAGA ACAGTACAGA CGAAGAGCGA AAAGGCGGAT GAGAGCAAAA AAAACTTTGG AGACAGAATA CAATGAATGA ATACAAAAAA GTACACAAAG GACAAAGAGT GTGTATCTCC GATGTCAAGA GGTTTCCCAT CTATGGTGAT CCTGTCGTAG CCCCACGCCA TCTTGCCACT TGGGTTTCAT CTCTCCTCTT TGTTATGTCT CTCGCTTTTC CATCTCAAGA AGAGAGAAGA ATATGCTCTT GGGAGTTCCG GGATTTCACA AGGAGATCCG ATCGAGCCAT TGAGTACAGT GCTAGGCAGC GGAGGTCGTG TTCAGTTCTT AATCCTTTGG ATAGATTCAT CGTCAA |
CDS |
| >Mp5g11460.1 ATGGGCTCCC CTCCGAACGC AGCGTGCGCT GCCTGCAAGT TCCAGCGTCG GAAATGCGCT GTGGACTGCT TGCTGGCGCC GTGGTTCCCT CCGGACCAGC CCAGGCGCTT TGCCAACGCG CACAGGCTCT TCGGAGTAGC GAACATATTG AGACTGATTC GAGAGAATCG CAGCTCCGTC GACGATCTGA TGAAGAGTGT CTGCTTCGAG TCTGACACTC GGGAACGAGA TCCTGTCAAT GGAGCGTACG GGACATTACG ACTTCTTCAG CGAGAGGCCG AGAGACTGGA GGAGAACAGA ACGGCTTTGT CCGAGAAGCT AAGGATACTG TTGCTGGAGG ATGCTGCTGC CAACAATGTC AACAACCCAC CGCATACCCA TACTGCCTAC AACGCGGTGC CTCCAGAGTA TTACGCACAT GCACGGCCTA CTCAGGTCGC CTTTGCAGAG ACAACGCCAG CGCTGCAAGA CAACGATGTT TATCATATGC AGCACCACCA CCACCAGCAT CAACAACAGC AGCATCAGCA TCATCAGCAG CAACAGCAGC CGCATCAACA ACAGCAACAA CTGCATTATA TGCAGATGCC CCAGCATCAG ATGCCTTCTC TAGAGTATTT TGTTAATTTC AACGCCAGTG GTGGCTTTAC TCCGGTGCAA GCAACGGACG CGTCGACCTC TCATCCACAT ATGCACCTCA CGGATAGAAG TGCAGAAATG CCTCTTCATC GGGCCTCTTC TTCGTACACT GGACCAGCAG CGAGAGACTT TCTCTCCCTC ACAAACAACT CTAACTCTAA CTCTCGCTTT TATTGA |
Protein |
| >Mp5g11460.1 MGSPPNAACA ACKFQRRKCA VDCLLAPWFP PDQPRRFANA HRLFGVANIL RLIRENRSSV DDLMKSVCFE SDTRERDPVN GAYGTLRLLQ REAERLEENR TALSEKLRIL LLEDAAANNV NNPPHTHTAY NAVPPEYYAH ARPTQVAFAE TTPALQDNDV YHMQHHHHQH QQQQHQHHQQ QQQPHQQQQQ LHYMQMPQHQ MPSLEYFVNF NASGGFTPVQ ATDASTSHPH MHLTDRSAEM PLHRASSSYT GPAARDFLSL TNNSNSNSRF Y |