Mp5g12480
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:3.30.730.10 | AP2/ERF domain |
| PANTHER | PTHR31190 | DNA-BINDING DOMAIN |
| SMART | SM00380 | rav1_2 |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Pfam | PF00847 | AP2 domain |
| SUPERFAMILY | SSF54171 | DNA-binding domain |
| ProSiteProfiles | PS51032 | AP2/ERF domain profile. |
| FunFam | G3DSA:3.30.730.10:FF:000001 | Ethylene-responsive transcription factor 2 |
| CDD | cd00018 | AP2 |
| PRINTS | PR00367 | Ethylene responsive element binding protein signature |
| KEGG | K09286 | EREBP-like factor |
| MapolyID | Mapoly0092s0058 | - |
| GO | GO:0006355 | regulation of DNA-templated transcription |
| GO | GO:0003700 | DNA-binding transcription factor activity |
| GO | GO:0003677 | DNA binding |
| GO | GO:0009873 | ethylene-activated signaling pathway |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpERF18 | transcription factor, AP2/ERF | Published |
Associated Literature (AI-based literature mining, Beta-version)
transcription factor, AP2/ERF (from nomenclature)
0 core 1 peripheral
Csicsely, E., et al. (2025)
· The Plant Journal research experimental background
AP2/ERF TF (Mp5g12480); up in Mpdcl4.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp5g12480 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp5g12480.1 GCGCTTCGTC CCCTGCGAGT CGCGACGCCG ACGGCCTATA GTCCCCGCAC AAAAGAGCGA GCCCCGGCCC CGACACTGCG AGAGCAGAGC CGAGCGCATC GCGAGCAGGC AGGCAGGCAG GCAGGCAGGC AGCCCCAACC CAACGAGAGC TAGGAGCCCC GAGCAAGGTG GCGCAAAGTG CAGTGAAGTG AAGTGAAGCA GCGCGAGGGC GACGGGCCCG AAGCAGAGGG GCGTTATGAA CTGATATGGA ACTTGCGGAA GCTGGTGTCC AGAGATGACG ATGGTGGTGG CTGATGATGG GCCGGTCGGT GGCGGAGACG AGTGGTGGCA TCGCAAACGC AGTCGGAGTT GCTTCGATGA TGGAGGTGAT GATGGTGCCG GAGCTGCTGC TGCTGCTGCT GGTGGCGCTG CCGCGGGAGG CGACGATCTT GGAAGTGCGA GGCGAGCGAG AACGCCTGGC TCGCCCGACG AGCGCTTCTT GGCGATGCGG GGAGGAGGCG CGGGAGGCGA AGAAGGAGGA GGAGGAGGAG GCGCCGGGCG GGCGCGCGAG GAGGAAGAGG ATGATGGTGC GAGTGTTTCT TGCTGCTGCG CGACCTCGTC GTCTTGCGGA AGCACAATGC GGGACGCTGG AGCCGACGGA GCTGGCGGGG GTGAAGTTCT TGATCCCGGA GTCGAGAAAT TGGACCCGAA ATCCTCGTCG CTGAGGGATT TCGGAGTCTC TCCTGCCTCC GGTTCTGCTT CTGTCGCCGC TGCTGCCATC AAAGACGCTG CGGGAAAAGG CCCCTCTCTG TCGTCTGGCA GCAGCTGCCT CAGCAGCAAT AGCTGCGCCA GCAACAAGGC GACCAAGGTC GAAGCTGCGG CGGCTCCATC AACAGCAGCA GCAGCAGGAG GAGCGGCACC AGCAGCCGAA ACGACCCCGA GGCATTTCCG CGGAGTCCGG CGTCGGCCTT GGGGTAAGTG GGCCGCTGAG ATTCGCGATC CCGAGAAAGG AGTTCGAGTT TGGCTCGGAA CATTTCCCAC TCCTGAGAAG GCTGCGCGAG CGTACGACTG CGCTGCGCGG AGGATACGTG GAAAGAAGGC GAAGCTGAAC TACCCGGACG AGAACTCGCC GACCAAGCCC TTGACCAAGC AGGTGCAGAA GGTGGTCAAG AAGAAGCCGC AATCTCCTGT CAGCGTCGTC CAGGGGCCCC TGTCGTCGTC CACAGAGAGC AATGACTCCA GGGTGTCCCC GCCCGCGAGT AGGGAAGTAG CAGGCGAAGT GGATCTCGCA AGTTTGGACA GCGGGTCGGT CGCGGACTGT CTGGACAGCT GCTCCGTGGG CGACGGATCC ACTGTCACGG AGGTGGGAGG GGAGGTGGAA CATCAGCATG CCCAGTACGA CACGAGTCAC ATGGAGGAAT TCCAAATTGA AGACAAAGTT CGAGCGAGGG ACCTCTGGCA GTGGAGCAGC TTGGAGCCTC TGTGTTTTGA CTACGCCATT CCTCTCTGGA CTTTCGATGA TCTTCCCAAC TTGTCTTAAC CTCCTCGATG TTTGTTGCTG CGGGCGGTTC TAGCCAGCAA TTTTTACTAG GTTGTATATA GTAGGGGCAG TACAGATTAG AGGTGCAAGT TTGATGATAA GCACCCCGTA TAACCTCTTG GTGCTTGGAG AGCTACCAGA TGTTGTAGAG GCATGATGTG AATTATCGAT ACTCAGCTCT GCGGATGGTC AAAGGACAGA GAATCATTGC ATTTTTCTCC GTAGTCGAGG AGAGCATTAC TGTGTGGGAA CGGGAGTCCA GCAATCGGAT CCGCTCATCC CCTGTTAATA GAAATGGTTG GTAGTACTCA ATGTTGGTCG CGGACGGGCA CTTTTGTAAA CTTCAAAGCT CTATTTGAAT TTTC |
mRNA UTR + CDS |
| >Mp5g12480.1 GCGCTTCGTC CCCTGCGAGT CGCGACGCCG ACGGCCTATA GTCCCCGCAC AAAAGAGCGA GCCCCGGCCC CGACACTGCG AGAGCAGAGC CGAGCGCATC GCGAGCAGGC AGGCAGGCAG GCAGGCAGGC AGCCCCAACC CAACGAGAGC TAGGAGCCCC GAGCAAGGTG GCGCAAAGTG CAGTGAAGTG AAGTGAAGCA GCGCGAGGGC GACGGGCCCG AAGCAGAGGG GCGTTATGAA CTGATATGGA ACTTGCGGAA GCTGGTGTCC AGAGATGACG ATGGTGGTGG CTGATGATGG GCCGGTCGGT GGCGGAGACG AGTGGTGGCA TCGCAAACGC AGTCGGAGTT GCTTCGATGA TGGAGGTGAT GATGGTGCCG GAGCTGCTGC TGCTGCTGCT GGTGGCGCTG CCGCGGGAGG CGACGATCTT GGAAGTGCGA GGCGAGCGAG AACGCCTGGC TCGCCCGACG AGCGCTTCTT GGCGATGCGG GGAGGAGGCG CGGGAGGCGA AGAAGGAGGA GGAGGAGGAG GCGCCGGGCG GGCGCGCGAG GAGGAAGAGG ATGATGGTGC GAGTGTTTCT TGCTGCTGCG CGACCTCGTC GTCTTGCGGA AGCACAATGC GGGACGCTGG AGCCGACGGA GCTGGCGGGG GTGAAGTTCT TGATCCCGGA GTCGAGAAAT TGGACCCGAA ATCCTCGTCG CTGAGGGATT TCGGAGTCTC TCCTGCCTCC GGTTCTGCTT CTGTCGCCGC TGCTGCCATC AAAGACGCTG CGGGAAAAGG CCCCTCTCTG TCGTCTGGCA GCAGCTGCCT CAGCAGCAAT AGCTGCGCCA GCAACAAGGC GACCAAGGTC GAAGCTGCGG CGGCTCCATC AACAGCAGCA GCAGCAGGAG GAGCGGCACC AGCAGCCGAA ACGACCCCGA GGCATTTCCG CGGAGTCCGG CGTCGGCCTT GGGGTAAGTG GGCCGCTGAG ATTCGCGATC CCGAGAAAGG AGTTCGAGTT TGGCTCGGAA CATTTCCCAC TCCTGAGAAG GCTGCGCGAG CGTACGACTG CGCTGCGCGG AGGATACGTG GAAAGAAGGC GAAGCTGAAC TACCCGGACG AGAACTCGCC GACCAAGCCC TTGACCAAGC AGGTGCAGAA GGTGGTCAAG AAGAAGCCGC AATCTCCTGT CAGCGTCGTC CAGGGGCCCC TGTCGTCGTC CACAGAGAGC AATGACTCCA GGGTGTCCCC GCCCGCGAGT AGGGAAGTAG CAGGCGAAGT GGATCTCGCA AGTTTGGACA GCGGGTCGGT CGCGGACTGT CTGGACAGCT GCTCCGTGGG CGACGGATCC ACTGTCACGG AGGTGGGAGG GGAGGTGGAA CATCAGCATG CCCAGTACGA CACGAGTCAC ATGGAGGAAT TCCAAATTGA AGACAAAGTT CGAGCGAGGG ACCTCTGGCA GTGGAGCAGC TTGGAGCCTC TGTGTTTTGA CTACGCCATT CCTCTCTGGA CTTTCGATGA TCTTCCCAAC TTGTCTTAAC CTCCTCGATG TTTGTTGCTG CGGGCGGTTC TAGCCAGCAA TTTTTACTAG GTTGTATATA GTAGGGGCAG TACAGATTAG AGGTGCAAGT TTGATGATAA GCACCCCGTA TAACCTCTTG GTGCTTGGAG AGCTACCAGA TGTTGTAGAG GCATGATGTG AATTATCGAT ACTCAGCTCT GCGGATGGTC AAAGGACAGA GAATCATTGC ATTTTTCTCC GTAGTCGAGG AGAGCATTAC TGTGTGGGAA CGGGAGTCCA GCAATCGGAT CCGCTCATCC CCTGTTAATA GAAATGGTTG GTAGTACTCA ATGTTGGTCG CGGACGGGCA CTTTTGTAAA CTTCAAAGCT CTATTTGAAT TTTC |
CDS |
| >Mp5g12480.1 ATGACGATGG TGGTGGCTGA TGATGGGCCG GTCGGTGGCG GAGACGAGTG GTGGCATCGC AAACGCAGTC GGAGTTGCTT CGATGATGGA GGTGATGATG GTGCCGGAGC TGCTGCTGCT GCTGCTGGTG GCGCTGCCGC GGGAGGCGAC GATCTTGGAA GTGCGAGGCG AGCGAGAACG CCTGGCTCGC CCGACGAGCG CTTCTTGGCG ATGCGGGGAG GAGGCGCGGG AGGCGAAGAA GGAGGAGGAG GAGGAGGCGC CGGGCGGGCG CGCGAGGAGG AAGAGGATGA TGGTGCGAGT GTTTCTTGCT GCTGCGCGAC CTCGTCGTCT TGCGGAAGCA CAATGCGGGA CGCTGGAGCC GACGGAGCTG GCGGGGGTGA AGTTCTTGAT CCCGGAGTCG AGAAATTGGA CCCGAAATCC TCGTCGCTGA GGGATTTCGG AGTCTCTCCT GCCTCCGGTT CTGCTTCTGT CGCCGCTGCT GCCATCAAAG ACGCTGCGGG AAAAGGCCCC TCTCTGTCGT CTGGCAGCAG CTGCCTCAGC AGCAATAGCT GCGCCAGCAA CAAGGCGACC AAGGTCGAAG CTGCGGCGGC TCCATCAACA GCAGCAGCAG CAGGAGGAGC GGCACCAGCA GCCGAAACGA CCCCGAGGCA TTTCCGCGGA GTCCGGCGTC GGCCTTGGGG TAAGTGGGCC GCTGAGATTC GCGATCCCGA GAAAGGAGTT CGAGTTTGGC TCGGAACATT TCCCACTCCT GAGAAGGCTG CGCGAGCGTA CGACTGCGCT GCGCGGAGGA TACGTGGAAA GAAGGCGAAG CTGAACTACC CGGACGAGAA CTCGCCGACC AAGCCCTTGA CCAAGCAGGT GCAGAAGGTG GTCAAGAAGA AGCCGCAATC TCCTGTCAGC GTCGTCCAGG GGCCCCTGTC GTCGTCCACA GAGAGCAATG ACTCCAGGGT GTCCCCGCCC GCGAGTAGGG AAGTAGCAGG CGAAGTGGAT CTCGCAAGTT TGGACAGCGG GTCGGTCGCG GACTGTCTGG ACAGCTGCTC CGTGGGCGAC GGATCCACTG TCACGGAGGT GGGAGGGGAG GTGGAACATC AGCATGCCCA GTACGACACG AGTCACATGG AGGAATTCCA AATTGAAGAC AAAGTTCGAG CGAGGGACCT CTGGCAGTGG AGCAGCTTGG AGCCTCTGTG TTTTGACTAC GCCATTCCTC TCTGGACTTT CGATGATCTT CCCAACTTGT CTTAA |
Protein |
| >Mp5g12480.1 MTMVVADDGP VGGGDEWWHR KRSRSCFDDG GDDGAGAAAA AAGGAAAGGD DLGSARRART PGSPDERFLA MRGGGAGGEE GGGGGGAGRA REEEEDDGAS VSCCCATSSS CGSTMRDAGA DGAGGGEVLD PGVEKLDPKS SSLRDFGVSP ASGSASVAAA AIKDAAGKGP SLSSGSSCLS SNSCASNKAT KVEAAAAPST AAAAGGAAPA AETTPRHFRG VRRRPWGKWA AEIRDPEKGV RVWLGTFPTP EKAARAYDCA ARRIRGKKAK LNYPDENSPT KPLTKQVQKV VKKKPQSPVS VVQGPLSSST ESNDSRVSPP ASREVAGEVD LASLDSGSVA DCLDSCSVGD GSTVTEVGGE VEHQHAQYDT SHMEEFQIED KVRARDLWQW SSLEPLCFDY AIPLWTFDDL PNLS |