Mp5g16520
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:2.40.480.10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Pfam | PF03018 | Dirigent-like protein |
| MapolyID | Mapoly0117s0053 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpDIR38 | Secondary metabolism enzyme | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
Dirigent-like protein gene (Mp5g16520), a previously known wound-inducible marker confirmed by RT-qPCR to be MpERF15-dependent.
1 core 0 peripheral
Liang, Y., et al. (2022)
· Science Advances research experimental subject
Dirigent-like protein gene (Mp5g16520), a previously known wound-inducible marker confirmed by RT-qPCR to be MpERF15-dependent.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp5g16520 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp5g16520.1 ACAAAGCTAT GTCTGGCAAC AAACCCGCGG ACTAGCAAGG ACGGACTTGT TCGTCCGAAG GTCCTCTCCC TATGTAAACG CGAACGCGAA CTCATGCATC ACTACCAAGG CCAGCAAGAA TATCTAAGAT ACTGGGAAGG AGCTTCGAGG TTCAAGAGGT AAGATCAACA TGTGCAACTC CTTTGGTAAC CGCTGCTGAT GTCTGTTAGT TGCAGAGTGC CTCGTGACTG ACTTAGCACT CTGGAGTACT GCAAAACATT CGTTTGGGTC AAACGCAGTT TGTTTGAGGA ATTTGCTGTT GTACGTGATG ACATTAGAGA TCTGTCTGTG TTGACAGTGA CAGTTGTCAC CCAAACGAGC GACAAAAACT GCAGTACTCA AAGTTCTATT TGCCGTTCTT GTCTTCCTAT CATTGATCAG TCAGAACATA GGAAACAGTT TGGTAATCAG GCTGGCAACC TTTGCATTTC CTAAATCCGT AATCTCCTGC AAGCTGCATA ATGATTATAG TGAGAAGCAG TATTCTTATC TGCAGAATTA TATGAGTACA ATCTGTTCGT CACAAGTCCT CGTCTATGAA TTTTGAGCTT GGAAAGGGCG TTTGGGTCAT TAATACAGAT TTCTGACAGA TTCAGCTCGC AGATAATCTG GTTCAAGATC AGCGCTCTAG AGCGATGGAT CACATGTCGT TGAGGAGTAA TTCAAAAGTG AATGCATCGT ACTGCAAGTA TGTCATGAGC TACTATGAGT TCATACCGGC CGGCGACACA GAAGTGTTCA AGCCCTTGGC AGCTGATCCG GTTCCGAACA AAGGAATAGG CTACGTCAAG AACAATCTCC TCTACTCCTC AAGGGACAAA ACAAAAGTTT ACGGGCACGT TGGTGGGTTG TACTTCTACC ATACAGAGGA CGTGATCGAG GATGTGGTGA CAATTACCTT CTCCGAAGGC TTGGTCCGAC CGTGGGGAGG CAGCTCGATC AGCCTGCGAG GCTCGTGGTT CATGACTCCA GACGGTCAAG CTGATCTTGA CAAACAGGAG CTGGGCATCG TAGGTGGACA GGGCCAATTC AGAGGCGCCA CGGGATTTGT CAAGTACGAG AAAGTGCAGA AAGATCCACA AACCGTGTTC CATGTCACTT GCCACATCTA TGTTCCTGAC TTCGTCGGCC GCGATCACGA AGTTGAGATC AACCTCAACG AGCTGCTCGA AGCTGATGCC AAACCAAACG GCTTTCACGG CCATGGTCAC GATCAGGGTT ACGGTCATGG TCATAATCAT GGTCACGGTC ATGATCGAAG AGAGTAGGGC GACTGCCTGA AGGTCTCATG GCTGCTAGAA CTGAATCGGA CTTGTCTGCC GTTTCGCGAC CATACTCTCG AGCTGGTGTT GCAGATACGA CAAGCATGGA GTTGTTTTCC CGGACGAAGT TTGTGAGCTT TGTCAGTCGG TATAGAATCC TTCTCAGTAG GATTATATTC TGTTTAGTCG GGCAAGCATA TTTAGTTCCG GAAGTTAGTA TAGAAACTCA TACAAGGCTT GCATTTCCTA TTACGGTAGG CTCATTTGAT GTCTTCTGCT TCTCCGTATT TTTGGCTCGA TGCAACAACG CGAGGATCAG AGGTTTAGGG TTTACTTTTT GGCTAGATTT GACAATGTAA GTCTTTTAGT GATATTCGAT TTATTTTTTA ATAACGTACA CCGTTATCAT GATCCTTGTG A |
mRNA UTR + CDS |
| >Mp5g16520.1 ACAAAGCTAT GTCTGGCAAC AAACCCGCGG ACTAGCAAGG ACGGACTTGT TCGTCCGAAG GTCCTCTCCC TATGTAAACG CGAACGCGAA CTCATGCATC ACTACCAAGG CCAGCAAGAA TATCTAAGAT ACTGGGAAGG AGCTTCGAGG TTCAAGAGAT TCAGCTCGCA GATAATCTGG TTCAAGATCA GCGCTCTAGA GCGATGGATC ACATGTCGTT GAGGAGTAAT TCAAAAGTGA ATGCATCGTA CTGCAAGTAT GTCATGAGCT ACTATGAGTT CATACCGGCC GGCGACACAG AAGTGTTCAA GCCCTTGGCA GCTGATCCGG TTCCGAACAA AGGAATAGGC TACGTCAAGA ACAATCTCCT CTACTCCTCA AGGGACAAAA CAAAAGTTTA CGGGCACGTT GGTGGGTTGT ACTTCTACCA TACAGAGGAC GTGATCGAGG ATGTGGTGAC AATTACCTTC TCCGAAGGCT TGGTCCGACC GTGGGGAGGC AGCTCGATCA GCCTGCGAGG CTCGTGGTTC ATGACTCCAG ACGGTCAAGC TGATCTTGAC AAACAGGAGC TGGGCATCGT AGGTGGACAG GGCCAATTCA GAGGCGCCAC GGGATTTGTC AAGTACGAGA AAGTGCAGAA AGATCCACAA ACCGTGTTCC ATGTCACTTG CCACATCTAT GTTCCTGACT TCGTCGGCCG CGATCACGAA GTTGAGATCA ACCTCAACGA GCTGCTCGAA GCTGATGCCA AACCAAACGG CTTTCACGGC CATGGTCACG ATCAGGGTTA CGGTCATGGT CATAATCATG GTCACGGTCA TGATCGAAGA GAGTAGGGCG ACTGCCTGAA GGTCTCATGG CTGCTAGAAC TGAATCGGAC TTGTCTGCCG TTTCGCGACC ATACTCTCGA GCTGGTGTTG CAGATACGAC AAGCATGGAG TTGTTTTCCC GGACGAAGTT TGTGAGCTTT GTCAGTCGGT ATAGAATCCT TCTCAGTAGG ATTATATTCT GTTTAGTCGG GCAAGCATAT TTAGTTCCGG AAGTTAGTAT AGAAACTCAT ACAAGGCTTG CATTTCCTAT TACGGTAGGC TCATTTGATG TCTTCTGCTT CTCCGTATTT TTGGCTCGAT GCAACAACGC GAGGATCAGA GGTTTAGGGT TTACTTTTTG GCTAGATTTG ACAATGTAAG TCTTTTAGTG ATATTCGATT TATTTTTTAA TAACGTACAC CGTTATCATG ATCCTTGTGA |
CDS |
| >Mp5g16520.1 ATGGATCACA TGTCGTTGAG GAGTAATTCA AAAGTGAATG CATCGTACTG CAAGTATGTC ATGAGCTACT ATGAGTTCAT ACCGGCCGGC GACACAGAAG TGTTCAAGCC CTTGGCAGCT GATCCGGTTC CGAACAAAGG AATAGGCTAC GTCAAGAACA ATCTCCTCTA CTCCTCAAGG GACAAAACAA AAGTTTACGG GCACGTTGGT GGGTTGTACT TCTACCATAC AGAGGACGTG ATCGAGGATG TGGTGACAAT TACCTTCTCC GAAGGCTTGG TCCGACCGTG GGGAGGCAGC TCGATCAGCC TGCGAGGCTC GTGGTTCATG ACTCCAGACG GTCAAGCTGA TCTTGACAAA CAGGAGCTGG GCATCGTAGG TGGACAGGGC CAATTCAGAG GCGCCACGGG ATTTGTCAAG TACGAGAAAG TGCAGAAAGA TCCACAAACC GTGTTCCATG TCACTTGCCA CATCTATGTT CCTGACTTCG TCGGCCGCGA TCACGAAGTT GAGATCAACC TCAACGAGCT GCTCGAAGCT GATGCCAAAC CAAACGGCTT TCACGGCCAT GGTCACGATC AGGGTTACGG TCATGGTCAT AATCATGGTC ACGGTCATGA TCGAAGAGAG TAG |
Protein |
| >Mp5g16520.1 MDHMSLRSNS KVNASYCKYV MSYYEFIPAG DTEVFKPLAA DPVPNKGIGY VKNNLLYSSR DKTKVYGHVG GLYFYHTEDV IEDVVTITFS EGLVRPWGGS SISLRGSWFM TPDGQADLDK QELGIVGGQG QFRGATGFVK YEKVQKDPQT VFHVTCHIYV PDFVGRDHEV EINLNELLEA DAKPNGFHGH GHDQGYGHGH NHGHGHDRRE |