Mp5g19740



Description

Annotation

Database ID Description
CDD cd05121 ABC1_ADCK3-like
Coils Coil Coil
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
Pfam PF03109 ABC1 atypical kinase-like domain
ProSiteProfiles PS50011 Protein kinase domain profile.
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
PANTHER PTHR10566 CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED
KEGG K08869 aarF domain-containing kinase
KOG KOG1235 Predicted unusual protein kinase; [R]
MapolyID Mapoly0134s0032 -
GO GO:0006468 protein phosphorylation
GO GO:0009507 chloroplast
GO GO:0004672 protein kinase activity
GO GO:0005524 ATP binding

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

UVB-induced DEG, epoxide hydrolase/pheophytin pheophorbide hydrolase (annotation).

0 core 1 peripheral

Clayton, W. A., et al. (2018) · Plant Journal  research experimental background
UVB-induced DEG, epoxide hydrolase/pheophytin pheophorbide hydrolase (annotation).

Transcript models

Transcript ID Location Sequences Extract region
Mp5g19740.1 chr5:24133238..24139800 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp5g19740 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp5g19740 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.