Mp5g20580
Description
Annotation
| Database | ID | Description |
|---|---|---|
| NCBIfam | TIGR02749 | solanesyl diphosphate synthase |
| PANTHER | PTHR12001 | GERANYLGERANYL PYROPHOSPHATE SYNTHASE |
| Gene3D | G3DSA:1.10.600.10 | Farnesyl Diphosphate Synthase |
| SUPERFAMILY | SSF48576 | Terpenoid synthases |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| ProSitePatterns | PS00723 | Polyprenyl synthases signature 1. |
| CDD | cd00685 | Trans_IPPS_HT |
| Pfam | PF00348 | Polyprenyl synthetase |
| SFLD | SFLDS00005 | Isoprenoid Synthase Type I |
| ProSitePatterns | PS00444 | Polyprenyl synthases signature 2. |
| KEGG | K05356 | all-trans-nonaprenyl-diphosphate synthase [EC:2.5.1.84 2.5.1.85] |
| KOG | KOG0776 | Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase; [H] |
| MapolyID | Mapoly0058s0036 | - |
| GO | GO:0009507 | chloroplast |
| GO | GO:0008299 | isoprenoid biosynthetic process |
| GO | GO:0010236 | plastoquinone biosynthetic process |
| GO | GO:0004659 | prenyltransferase activity |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpIDS4 | Secondary metabolism enzyme, Terpene biosynthesis enzymes | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
Secondary metabolism enzyme, Terpene biosynthesis enzymes (from nomenclature)
0 core 2 peripheral
Forestier ECF, Asprilla P, Bonter I, Romani F, Frangedakis E, Haseloff J. (2026)
· Communications biology research sequence background
Alternative isoprenyl diphosphate synthase listed/analyzed with lower expression or different predicted function.
Clayton, W. A., et al. (2018)
· Plant Journal research experimental background
UVB-induced DEG, all-trans-nonaprenyl-diphosphate synthase (ubiquinone biosynthesis) (annotation).
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp5g20580 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp5g20580.1 GGGGGTTGCG AATCGGGGGG CTGTTGGATG AGCTCGAGCC CGCGAAGGGG CTGCGTAGGT GGATTCAGGG GCCGATGGAC ACGTGGCCGG GAAAGGCAGC GATCAGAATT CGGAGGACGA TTGGAGCTCG GGAGTGCGCG GCTTATTAGC TCGCGACAGT CCTGCTCGGG CGATTTGCGC GCTGGGTTCT CCATCTGCCT GCTGCCCCCC TCCGCTCTTC TCTGCCCTGG CTTCGCAGGC AAGGCAGATC GAGGCGGTGC AGCTGCAATT GAAGTCCGAC GGGTGGCCCG GACGGAGCAA CTCGAATGAG TAGACAGATT CCACGTGCGC TTCACGTAGT CAGCTCTATC TTCGCGGTCC TGTGGTGGTT TAGTTGTTTA TCGCTCCGCT CGCGCTTTCG CCTTGTCGTG TGACAATCGG CAGGTGTTTT CCCGACTTCT TCTTATATGT AGGAGCGCGC GCGCAGCCTG GCAGTACGCG AGATAAGGTT TTCTTCTGCC ACTGCGGGGG ATCCGTACAC AGTGTACATG GCCGAAAATC TTCATTCCGT CGACGCACTC GGAGCCCGGC TGCACAGCTG AGCTCGACTC GGGGCACCGC CGTTCGCTCG CTCATTGCCC GCGCGAGCGC CAAAAGAAAA AGGAAAATAC AGTTAGACGC ATTTCACAAC TCGCGGGCAC GAATTGGTTG GCGTTTTGTA TTGTAGCTCA CTCTCTCGCG AAGTAGGTAG CGCACGGGAC ACGCGAGGGC GCAGAGGTTC TATTTTTCGG CTCGGGGGCT GTGGAGGAAT TGAGGTGCAG GTGACAGAAT CGGGTTCCCG CTCAAAGTGG TTTTGCGATA TTGACGTCTT TGAAGGAGGT CAAGCGATAG AGGGACCGTA TGGCCGCGGT CATGGCTAGT ATGCCGAATA TCGGGCCCTG TAGGACTGGC CTCGACACCT GCAGCGTCTG CTGTCAAATG TATTTATCTC CCGGAGTATC GTCCAAGAGG GTCCATCCTC GTAGCACTAC TGTCACAGGC CAGGGGTTGG GGAAGTACGC CGGTTGTAAA GTCGATGCCT TCAAGCCCGC AGGACCCCCT AGAGACGACA GGTCTGGCAG CAGGCGCAGC AACGGCTCTG TCAATGTGCA GCAGGCAATT CCCTCCACGA TAAACTCAAA TGCCGCTGAG AAGCTGTCCC TCGCCGGTCA AAAATCTGCG AATGTTCCCA TTGTCCCAGG TATGGATCCA CGGCAGCTTG CCCTTTCTCC GCCTCTGTTT CCTGACATTT CTGCGTTGCC CATCCGGAAA CCAGTCCTTG AACTGTGCCT GACGAGTTCT CCTAATCCCC CGTTGTAATT GCCGGATGGT GATTCGTGCT GAGTTGACCG TTGTGGTTTT TATCAATCCG GGACGGTCTC ATGGTACATT GTGTTTAGGG CAGGGGAAGA TTGTGAAAGC AGATTCAGTC AGTCGATATC TTTAACAGCT GCCACTCGCC TTGTCTCTTT TTTCTGTAAA AGATTCAACT CTAGGTTCCG ACCAGATAGC AGAATTGTCG TCGATTTCGT CTCGAACTCC AAGTTATAGT TTTACAAATG TTTTACGTTA TTTTACACGG GTGAAGATCA CCAGTAGATG AAGTTCAGGA GTAAACGTGG TTCATATGGA CACGTTTACT CCCCACGCAC GAAAATCCTC CTTTGCACCT TCTGAATTGA CGATTCTTCT GAGTAAGTAG CTGTAAATTC ATCGAATAAG TTGCTGGGTG CACCGATAGA GTAGGTGCTG CAGGAACACG CCCTTTGCTT CAGTAACATA CCCTTCACTT GAGACTGCAC AGTCTGAGTT AGCTTGGAGT GACATAATCC CGAAAATCAC TTCTAATATT TGTAATTCAG ATAAGATCGA GTGAGATTTC ATGAATTCTA CTCATAGCTG GCTCATAGTA CAAAGAAAGA TATCGTAGCA TTCACTAAAA AAATATGCTA TTGTCTGATG TGAATTATCC CTTGATGGCT GCAGATATTA ACGGTATAAG CTTGTTACAA GTCGGACCCA ATGGAAGCAC ACTTGCTGGT GCGAGTACAC CAGATTCGAA GACGAAGATG TCCTTGAATG CCATCATGGC GCCAGTTGCG GATGATCTGA AAACACTGAA TGATAATTTG CATACTGTAA GACCCACGAC TTGTTCACTC CTGTTGGTGT TTCTAGTTTC ACTAGCCTAA CAATGACTTT CATCTTACAA GTCGTAATTC AGCAGGCTTG AACGAAAGAG CAGCTCACGG ACTTAAAGGA AACTAATCTG TTCCAATTTC GTTTTGTAGA TCGTAGGAGC CGAGAATCCC CTACTTATGG CGGCAGCTGA GCAGATTTTT AGCGCCGGAG GCAAAAGACT GAGGCCTGCC ATGGTGTTCC TTGTCTCCAA GGCCACAGCT CAACTTGCAG GACTTGAGTA CGTTTGGACT TTCGAACTTT TCTTTCAGCT ATCTATACAC TACTGCGCTT TACTATGCGC TTTAAATTTA CTTCATTTAA TTACAGGGAA ACTGAACTTC AGGTGATTTT GTCAAGTCAG ATATATCAGC ATACTGTTAA CTACTCTCAC CTGGAGTGAT CAGCCGATGG GTGTCAAACC TTCTAGTGTT AGTATTTTGT TTACTTGAGC TTTTTTAGCT AGTGTTAGTA TAAATTGGAA CTCGATGTTT CAAATTAAGG TGCCATAAGA GTTGCTGTGG CTAAGAAATG AATTTTTGCT ATAAGCATAT GTCTGAAAGC ACAGGTCTGA GTAAAATTTA GAGATCACCT TCTACAGATG TCTAACGTTA CAAGTGTAAT TGCGTGTGCA GTTCTATGCA GCCTCAACAT TGGCGCTTAG CCCAAGTTAT AGAAATGATA CATACGGCTA GCTTGATACA CGACGATGTT CTTGACGAGA GTGATGTCCG TCGAGGTATT GTTTCATGCA GACATGAATC GTTTGCATCT TTTGAATTTC ATTTCAACAC GTTGCCCCCT TTACTGACGT TTTAAAGCCA TTATCATCGT ACTAATTAAG ACTTGGCATT CCTCTCTGCA GGAAAAGAAA CTGTGCATAA TATGTTTGGA ACGCGCGTAG CAGTGTTGGC GGGTGATTTC ATGTTCGCAC AGTCTTCGTG GTATCTAGCC AACCTCGACA ATCTGGAAGT GATTAAGTTG ATTAGTCAGG TACGTTTTCG TCTCGTATCA TTGGGATCTT TTCAAGAGCA AGTAGAAATT GTCCACTGTA GCTCCATAAG CTGGAATACT TGAGTAAGTA CAGAACTGAA GAAACCGAGC TTTATGGTCT GTTATTTATC CCAGTCTGTC CGTACAAGCA CCGTTCAGCC AGGACGTTGA TGCATGGTCT TGAGGCTATG GCAAATTATG AGTCCAAGAG TCGGGTTGAA TAAGCGTGAT TGACCTTATA TCTTTATGAA CTACCCTGTG GACGGTGAAA GTCTCACTTG TATTCGAACG ACGGTGGGCT GATTTTCAGA CGTCGACCAC TTGATTTGAT ATAGTGCTAA AGCAGTGTGG AAACTCGGTA GAGGTGACTG TGTGATAAAC GTCTAACAAG GCTTGACTGA TTCTCTCTGA CAGGTGATCA AGGACTTCGC CAGCGGGGAG ATTAAGCAAG CTATGAGTTT GTTCGACTGT GATTTGACGC TTCAGGATTA CATGGATAAA AGTTATTACA AGACGGCCTC TTTGATTGCC GCCAGCACCA GATCCGCAGC CATATTTAGT GGAGTTAGCT CAAGTGTTTG CGAGCAGATG TACGATTATG GTCTACAACT GGGGTTGGCA TTCCAGGTGG TAGACGACAT TCTGGACTTC ACTCAGACTT CAGAGCAGCT CGGTAAACCT GCCGGTAGTG ATTTAGCGAA GGGTAATCTT ACAGCTCCTG TTTTGTTTGC TTTAGAGAAA GAGCCGGAGC TTAGGGACTT GATTGCAGGA GAGTTTACTG ACGAAGGTTC ATTAGAAGCA GCTATCGCTC TTGTGATAAG GGGAGGAGGT ATTGAAAAAG CTAGACAGCT TGCCAAGGAG AAGGGCAATC TTGCGTTGAA GGATTTGGAG TGTCTGCCTC AAGGTCCTCT TCGACGATCC TTAGAAGGTA TGGTAGACTA CGTTTTAGAG CGAATTTATT AGAGAAATGT CGGGCGTTTC GTCACTTGTA AACGATGAGG TTGAATCAAA ACCTTCCCTC TTCCGTGTAT GTATAGGTTC CGAAAGAAAA AGGAAGTAGG TGTTTCTGTA ACTTTACATT CTATTTTTTC ACGTCACCAG CAAAATCGAT GACATATAAG ATAATGTCTC ACGCTGTCGA CTGACTGATG TAAAAGACTT ATTTCATTTC TGGTCCAGTG GAAATGTACC |
mRNA UTR + CDS |
| >Mp5g20580.1 GGGGGTTGCG AATCGGGGGG CTGTTGGATG AGCTCGAGCC CGCGAAGGGG CTGCGTAGGT GGATTCAGGG GCCGATGGAC ACGTGGCCGG GAAAGGCAGC GATCAGAATT CGGAGGACGA TTGGAGCTCG GGAGTGCGCG GCTTATTAGC TCGCGACAGT CCTGCTCGGG CGATTTGCGC GCTGGGTTCT CCATCTGCCT GCTGCCCCCC TCCGCTCTTC TCTGCCCTGG CTTCGCAGGC AAGGCAGATC GAGGCGGTGC AGCTGCAATT GAAGTCCGAC GGGTGGCCCG GACGGAGCAA CTCGAATGAG TAGACAGATT CCACGTGCGC TTCACGTAGT CAGCTCTATC TTCGCGGTCC TGTGGTGGTT TAGTTGTTTA TCGCTCCGCT CGCGCTTTCG CCTTGTCGTG TGACAATCGG CAGGTGTTTT CCCGACTTCT TCTTATATGT AGGAGCGCGC GCGCAGCCTG GCAGTACGCG AGATAAGGTT TTCTTCTGCC ACTGCGGGGG ATCCGTACAC AGTGTACATG GCCGAAAATC TTCATTCCGT CGACGCACTC GGAGCCCGGC TGCACAGCTG AGCTCGACTC GGGGCACCGC CGTTCGCTCG CTCATTGCCC GCGCGAGCGC CAAAAGAAAA AGGAAAATAC AGTTAGACGC ATTTCACAAC TCGCGGGCAC GAATTGGTTG GCGTTTTGTA TTGTAGCTCA CTCTCTCGCG AAGTAGGTAG CGCACGGGAC ACGCGAGGGC GCAGAGGTTC TATTTTTCGG CTCGGGGGCT GTGGAGGAAT TGAGGTGCAG GTGACAGAAT CGGGTTCCCG CTCAAAGTGG TTTTGCGATA TTGACGTCTT TGAAGGAGGT CAAGCGATAG AGGGACCGTA TGGCCGCGGT CATGGCTAGT ATGCCGAATA TCGGGCCCTG TAGGACTGGC CTCGACACCT GCAGCGTCTG CTGTCAAATG TATTTATCTC CCGGAGTATC GTCCAAGAGG GTCCATCCTC GTAGCACTAC TGTCACAGGC CAGGGGTTGG GGAAGTACGC CGGTTGTAAA GTCGATGCCT TCAAGCCCGC AGGACCCCCT AGAGACGACA GGTCTGGCAG CAGGCGCAGC AACGGCTCTG TCAATGTGCA GCAGGCAATT CCCTCCACGA TAAACTCAAA TGCCGCTGAG AAGCTGTCCC TCGCCGGTCA AAAATCTGCG AATGTTCCCA TTGTCCCAGA TATTAACGGT ATAAGCTTGT TACAAGTCGG ACCCAATGGA AGCACACTTG CTGGTGCGAG TACACCAGAT TCGAAGACGA AGATGTCCTT GAATGCCATC ATGGCGCCAG TTGCGGATGA TCTGAAAACA CTGAATGATA ATTTGCATAC TATCGTAGGA GCCGAGAATC CCCTACTTAT GGCGGCAGCT GAGCAGATTT TTAGCGCCGG AGGCAAAAGA CTGAGGCCTG CCATGGTGTT CCTTGTCTCC AAGGCCACAG CTCAACTTGC AGGACTTGAT TCTATGCAGC CTCAACATTG GCGCTTAGCC CAAGTTATAG AAATGATACA TACGGCTAGC TTGATACACG ACGATGTTCT TGACGAGAGT GATGTCCGTC GAGGAAAAGA AACTGTGCAT AATATGTTTG GAACGCGCGT AGCAGTGTTG GCGGGTGATT TCATGTTCGC ACAGTCTTCG TGGTATCTAG CCAACCTCGA CAATCTGGAA GTGATTAAGT TGATTAGTCA GGTGATCAAG GACTTCGCCA GCGGGGAGAT TAAGCAAGCT ATGAGTTTGT TCGACTGTGA TTTGACGCTT CAGGATTACA TGGATAAAAG TTATTACAAG ACGGCCTCTT TGATTGCCGC CAGCACCAGA TCCGCAGCCA TATTTAGTGG AGTTAGCTCA AGTGTTTGCG AGCAGATGTA CGATTATGGT CTACAACTGG GGTTGGCATT CCAGGTGGTA GACGACATTC TGGACTTCAC TCAGACTTCA GAGCAGCTCG GTAAACCTGC CGGTAGTGAT TTAGCGAAGG GTAATCTTAC AGCTCCTGTT TTGTTTGCTT TAGAGAAAGA GCCGGAGCTT AGGGACTTGA TTGCAGGAGA GTTTACTGAC GAAGGTTCAT TAGAAGCAGC TATCGCTCTT GTGATAAGGG GAGGAGGTAT TGAAAAAGCT AGACAGCTTG CCAAGGAGAA GGGCAATCTT GCGTTGAAGG ATTTGGAGTG TCTGCCTCAA GGTCCTCTTC GACGATCCTT AGAAGGTATG GTAGACTACG TTTTAGAGCG AATTTATTAG AGAAATGTCG GGCGTTTCGT CACTTGTAAA CGATGAGGTT GAATCAAAAC CTTCCCTCTT CCGTGTATGT ATAGGTTCCG AAAGAAAAAG GAAGTAGGTG TTTCTGTAAC TTTACATTCT ATTTTTTCAC GTCACCAGCA AAATCGATGA CATATAAGAT AATGTCTCAC GCTGTCGACT GACTGATGTA AAAGACTTAT TTCATTTCTG GTCCAGTGGA AATGTACC |
CDS |
| >Mp5g20580.1 ATGGCCGCGG TCATGGCTAG TATGCCGAAT ATCGGGCCCT GTAGGACTGG CCTCGACACC TGCAGCGTCT GCTGTCAAAT GTATTTATCT CCCGGAGTAT CGTCCAAGAG GGTCCATCCT CGTAGCACTA CTGTCACAGG CCAGGGGTTG GGGAAGTACG CCGGTTGTAA AGTCGATGCC TTCAAGCCCG CAGGACCCCC TAGAGACGAC AGGTCTGGCA GCAGGCGCAG CAACGGCTCT GTCAATGTGC AGCAGGCAAT TCCCTCCACG ATAAACTCAA ATGCCGCTGA GAAGCTGTCC CTCGCCGGTC AAAAATCTGC GAATGTTCCC ATTGTCCCAG ATATTAACGG TATAAGCTTG TTACAAGTCG GACCCAATGG AAGCACACTT GCTGGTGCGA GTACACCAGA TTCGAAGACG AAGATGTCCT TGAATGCCAT CATGGCGCCA GTTGCGGATG ATCTGAAAAC ACTGAATGAT AATTTGCATA CTATCGTAGG AGCCGAGAAT CCCCTACTTA TGGCGGCAGC TGAGCAGATT TTTAGCGCCG GAGGCAAAAG ACTGAGGCCT GCCATGGTGT TCCTTGTCTC CAAGGCCACA GCTCAACTTG CAGGACTTGA TTCTATGCAG CCTCAACATT GGCGCTTAGC CCAAGTTATA GAAATGATAC ATACGGCTAG CTTGATACAC GACGATGTTC TTGACGAGAG TGATGTCCGT CGAGGAAAAG AAACTGTGCA TAATATGTTT GGAACGCGCG TAGCAGTGTT GGCGGGTGAT TTCATGTTCG CACAGTCTTC GTGGTATCTA GCCAACCTCG ACAATCTGGA AGTGATTAAG TTGATTAGTC AGGTGATCAA GGACTTCGCC AGCGGGGAGA TTAAGCAAGC TATGAGTTTG TTCGACTGTG ATTTGACGCT TCAGGATTAC ATGGATAAAA GTTATTACAA GACGGCCTCT TTGATTGCCG CCAGCACCAG ATCCGCAGCC ATATTTAGTG GAGTTAGCTC AAGTGTTTGC GAGCAGATGT ACGATTATGG TCTACAACTG GGGTTGGCAT TCCAGGTGGT AGACGACATT CTGGACTTCA CTCAGACTTC AGAGCAGCTC GGTAAACCTG CCGGTAGTGA TTTAGCGAAG GGTAATCTTA CAGCTCCTGT TTTGTTTGCT TTAGAGAAAG AGCCGGAGCT TAGGGACTTG ATTGCAGGAG AGTTTACTGA CGAAGGTTCA TTAGAAGCAG CTATCGCTCT TGTGATAAGG GGAGGAGGTA TTGAAAAAGC TAGACAGCTT GCCAAGGAGA AGGGCAATCT TGCGTTGAAG GATTTGGAGT GTCTGCCTCA AGGTCCTCTT CGACGATCCT TAGAAGGTAT GGTAGACTAC GTTTTAGAGC GAATTTATTA G |
Protein |
| >Mp5g20580.1 MAAVMASMPN IGPCRTGLDT CSVCCQMYLS PGVSSKRVHP RSTTVTGQGL GKYAGCKVDA FKPAGPPRDD RSGSRRSNGS VNVQQAIPST INSNAAEKLS LAGQKSANVP IVPDINGISL LQVGPNGSTL AGASTPDSKT KMSLNAIMAP VADDLKTLND NLHTIVGAEN PLLMAAAEQI FSAGGKRLRP AMVFLVSKAT AQLAGLDSMQ PQHWRLAQVI EMIHTASLIH DDVLDESDVR RGKETVHNMF GTRVAVLAGD FMFAQSSWYL ANLDNLEVIK LISQVIKDFA SGEIKQAMSL FDCDLTLQDY MDKSYYKTAS LIAASTRSAA IFSGVSSSVC EQMYDYGLQL GLAFQVVDDI LDFTQTSEQL GKPAGSDLAK GNLTAPVLFA LEKEPELRDL IAGEFTDEGS LEAAIALVIR GGGIEKARQL AKEKGNLALK DLECLPQGPL RRSLEGMVDY VLERIY |