Mp5g21990



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50985 GRAS family profile.
PANTHER PTHR31636 OSJNBA0084A10.13 PROTEIN-RELATED
Pfam PF03514 GRAS domain family
MapolyID Mapoly0194s0011 -
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0005634 nucleus
GO GO:0043565 sequence-specific DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpGRAS9 transcription factor, GRAS Published

Associated Literature (AI-based literature mining, Beta-version)

GRAS transcription factor (Mp5g21990); functions with MpANT (MpGRAS9-SRDX repressor) in meristem development.

1 core 1 peripheral

Liu, W., et al. (2024a) · Cell Reports  research experimental subject
GRAS transcription factor (Mp5g21990); functions with MpANT (MpGRAS9-SRDX repressor) in meristem development.
Melissa DÁ, Luis LJ, Eduardo FS, Annie EC, Domingo MÁ, Tom FJ, Jesús LR, Fernando OM, John BL, Mario AA, Cruz-Ramírez A. (2025) · Physiologia plantarum  research citation background
Cited from Liu et al. as a direct MpANT target.

Transcript models

Transcript ID Location Sequences Extract region
Mp5g21990.1 chr5:28060704..28066289 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp5g21990 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp5g21990 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.