Mp5g23350



Description

Annotation

Database ID Description
PANTHER PTHR47989 OS01G0750732 PROTEIN
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50011 Protein kinase domain profile.
Pfam PF00069 Protein kinase domain
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
FunFam G3DSA:1.10.510.10:FF:000240 Lectin-domain containing receptor kinase A4.3
ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature.
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
SMART SM00219 tyrkin_6
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
KOG KOG1187 Serine/threonine protein kinase; [T]
MapolyID Mapoly0010s0123 -
GO GO:0006468 protein phosphorylation
GO GO:0004713 protein tyrosine kinase activity
GO GO:0004672 protein kinase activity
GO GO:0005524 ATP binding

Nomenclature

Gene symbol Product Transcript ID Status
MpRLK-Pelle_PERK-2a Receptor-like Kinase (RLK) Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp5g23350.1 chr5:29656521..29662038 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp5g23350 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp5g23350 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.