Mp5g23410
Description
Annotation
| Database | ID | Description |
|---|---|---|
| SUPERFAMILY | SSF51182 | RmlC-like cupins |
| SMART | SM00835 | Cupin_1_3 |
| PRINTS | PR00325 | Germin signature |
| Pfam | PF00190 | Cupin |
| CDD | cd02241 | cupin_OxOx |
| PANTHER | PTHR31238 | GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls |
| MapolyID | Mapoly0010s0117 | - |
| GO | GO:0030145 | manganese ion binding |
| GO | GO:0005618 | cell wall |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpPR15f | Pathogen related | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp5g23410 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp5g23410.1 ATGGCTAAAG TCCAGGTACT GGCATCATTA CTGCTTGCAA TATTCTGCCT TCAGAGCCTG CAAGTGTTTG GATCGGATCC CGAGCTCACT TCGGACTTCA AAGTCCCAGA TGGAGAGAAT GCCACAGCTC TGGATGGAAA TTTCTTCACC TTCCCCGGTT TCAGGAACTT CACCGCCAAT CCGTCTGATG CTCCCCTCGT AACGACTATG AGAGCAGACC TCTCTAATTT TGCAGCACTC GATGGCCTCG GTATCTCTTC CACTCTCGTG GTTGCTCCAC CAGGGACCGT AAATCCTCCT CACGTCCATC CTCGTGCTTC GGAGCTCGTG TTCGTGCTCG AAGGCACCGT CGACATCGGC TTCGTAGACA CCACTAACAC GCTGAGGACC CAGACCTTGA AGGAGGGAGA TCTTTTCATT GTCCCCAGGG GCTTGGTTCA CTTCCAGTTC AACAACTATC AGACGACGGC TAAATTTCTC AACTCCTTCA GCAGCGCCTC TCCGGGAGTT GCCAGGCTCC CGACCACTCT GTTCGGGACC GGCATAGCTG ATGCAGTTTT GATTAAATCC TTCGGAGTGA CAGCTGACGT CATCGACAAG CTACAGGAAG CTGAAGGGGC TGGAACGCAA CCAGGCTACT AG |
mRNA UTR + CDS |
| >Mp5g23410.1 ATGGCTAAAG TCCAGGTACT GGCATCATTA CTGCTTGCAA TATTCTGCCT TCAGAGCCTG CAAGTGTTTG GATCGGATCC CGAGCTCACT TCGGACTTCA AAGTCCCAGA TGGAGAGAAT GCCACAGCTC TGGATGGAAA TTTCTTCACC TTCCCCGGTT TCAGGAACTT CACCGCCAAT CCGTCTGATG CTCCCCTCGT AACGACTATG AGAGCAGACC TCTCTAATTT TGCAGCACTC GATGGCCTCG GTATCTCTTC CACTCTCGTG GTTGCTCCAC CAGGGACCGT AAATCCTCCT CACGTCCATC CTCGTGCTTC GGAGCTCGTG TTCGTGCTCG AAGGCACCGT CGACATCGGC TTCGTAGACA CCACTAACAC GCTGAGGACC CAGACCTTGA AGGAGGGAGA TCTTTTCATT GTCCCCAGGG GCTTGGTTCA CTTCCAGTTC AACAACTATC AGACGACGGC TAAATTTCTC AACTCCTTCA GCAGCGCCTC TCCGGGAGTT GCCAGGCTCC CGACCACTCT GTTCGGGACC GGCATAGCTG ATGCAGTTTT GATTAAATCC TTCGGAGTGA CAGCTGACGT CATCGACAAG CTACAGGAAG CTGAAGGGGC TGGAACGCAA CCAGGCTACT AG |
CDS |
| >Mp5g23410.1 ATGGCTAAAG TCCAGGTACT GGCATCATTA CTGCTTGCAA TATTCTGCCT TCAGAGCCTG CAAGTGTTTG GATCGGATCC CGAGCTCACT TCGGACTTCA AAGTCCCAGA TGGAGAGAAT GCCACAGCTC TGGATGGAAA TTTCTTCACC TTCCCCGGTT TCAGGAACTT CACCGCCAAT CCGTCTGATG CTCCCCTCGT AACGACTATG AGAGCAGACC TCTCTAATTT TGCAGCACTC GATGGCCTCG GTATCTCTTC CACTCTCGTG GTTGCTCCAC CAGGGACCGT AAATCCTCCT CACGTCCATC CTCGTGCTTC GGAGCTCGTG TTCGTGCTCG AAGGCACCGT CGACATCGGC TTCGTAGACA CCACTAACAC GCTGAGGACC CAGACCTTGA AGGAGGGAGA TCTTTTCATT GTCCCCAGGG GCTTGGTTCA CTTCCAGTTC AACAACTATC AGACGACGGC TAAATTTCTC AACTCCTTCA GCAGCGCCTC TCCGGGAGTT GCCAGGCTCC CGACCACTCT GTTCGGGACC GGCATAGCTG ATGCAGTTTT GATTAAATCC TTCGGAGTGA CAGCTGACGT CATCGACAAG CTACAGGAAG CTGAAGGGGC TGGAACGCAA CCAGGCTACT AG |
Protein |
| >Mp5g23410.1 MAKVQVLASL LLAIFCLQSL QVFGSDPELT SDFKVPDGEN ATALDGNFFT FPGFRNFTAN PSDAPLVTTM RADLSNFAAL DGLGISSTLV VAPPGTVNPP HVHPRASELV FVLEGTVDIG FVDTTNTLRT QTLKEGDLFI VPRGLVHFQF NNYQTTAKFL NSFSSASPGV ARLPTTLFGT GIADAVLIKS FGVTADVIDK LQEAEGAGTQ PGY |