Mp5g24140
Description
Annotation
| Database | ID | Description |
|---|---|---|
| ProSiteProfiles | PS50013 | Chromo and chromo shadow domain profile. |
| SUPERFAMILY | SSF54160 | Chromo domain-like |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| SMART | SM00298 | chromo_7 |
| Gene3D | G3DSA:2.40.50.40 | - |
| Pfam | PF00385 | Chromo (CHRromatin Organisation MOdifier) domain |
| KOG | KOG2748 | Uncharacterized conserved protein, contains chromo domain; C-term missing; [B] |
| MapolyID | Mapoly0010s0042 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpChromo4 | Chromatin related protein | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp5g24140 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp5g24140.1 AAAACGAGAA GATTTGCAAT CGGCTGTTTT TTTCCTAAGC TATTCGCAGT CTTCGAGCAG GATCTACGGA TAGTAGTAGC GTCGAGCTGA AGCTTCACCT TCATCGAGCT AGCATTTCGA TCTCTGTTAG CAACAACATT TAGCTGGAAG ATTTTCATCT AGAGCTCTGT AAGATGCCGA GAAGAGGATC ATATCACAGG AAAGGTAAGT ATTGTTCTCA AACTCCACAG AATGATCCCG GTTCAATATT CACTTCACTG TTTGCAAATT ATTGCATTCT CAACAAGGTT CAAAGCTTAC ACAAAAGCGA CCGGGTCATA TGCATTTCAC AGCCAGTAGT TTCCCTGTAG TCGACCAAAT AATGCGTCTG ATTGCGGGTG GACGACATGT TACCTCTATT TCTTACTCAT AGACAGGAAA ATGATCCATC TTTGATCTCG ATTGCAGATA GGTGTTGAAA GCTCTCGTCG CTTCTTATGC TCCAAAAGGT CGTGAAAGTC CACACTTTAG GTTTTATATT GCACTCGTTC CGAGCTACTG AGTCTTTGTT AAGGTCAAGC ATTTGTTGTA GCAGTGATAG AATTTTGATT ATAGATCCCT CTGCTCAATT TACTAACTTC GTATTGCATC TGCGTGTTCA AGTCCTGAAG TCTGGTATCT GACAAAACGT CTCCATGGTT TCTGGATTTT GAGAACACAG CAAAGGCAGG AAGATCCAAA TATGTTGAAC CATTGATGGT AGGAATGAAT TCTACCGATT CTGAAGTTCA GCGACCCAAC AATATTGCAC CATGCAACGA TGGAGTGTTT CCTTTCCAAT CTGAAGTTCA GCGACCCAAC AATAGTGCAC CATTCGACGA TGGAGTGTTT CCTTTCCAAT CTGAAGTTCA GCGACCCAAC AATAGTGCAC CATTCGACGA TGGGGTGTTT CCTCCCCAAC ATGAAGTTTG GCGATCCAAC TATATTGCAC CATACGACGA TGGAAAGAGT TCTATCTATG AATCTAAATC AATCGATCAT TGGAATGATG ATTATGATGA AAGTAGATGG AATAATGGAC GAGGATACGG CTACTGGACT TCGGACTCAG AGGACAACTA CCCACCTCCT GACTTCACAA CTGGACCCGC ACCTCCTGAA GACGACGCAA CTGTGCTGAC AACTGCTGAG GCACCTTCCA ACGAGGCCAC ACATGTTGTC ACACCTGTTT ACACACCTGC TGAAGATCTG AACTTTAAAT CCATCCATTC GTTAAAATCT AATCCGGAGG AAAAAGAGAA GAAAATTCCG CACTTCCAGA TGAAGAATAC GATATCTCAC ATATGCAATG AATTACAAGA GTATGAAACA TTTCAAGGTA AGGAGTTAAC AAGACATCGT CACACGCCGA AAGGTTGCAG CTCTTGTATT TCGACCAAAT TCGAAATCAA AAGCGACGGA ACAAAGACTT GGGAGATAGT TCTGTCAAGT ACGCAGAAGC TTTCAAATAG TTCTGTTAAT GCCGCCATCA ACCATGTAGA ACAAGTTCTG AAGACGTCGC AGGTGGGCCT GTCTTCATCC CTTTTTAGTC CCTCTGACTT CTAGAACATT TGATAGTGTA TAGTGAGGAT CTGTTACCAG TGTAGGTAGA AACATTCACA TTAGAAAGGA TCGTACGTAC CTTCCAAATT AAACTGTAGA GATATAGCAC CTCCTTCGGT GCTGTTCAGT TGGTCGATCT CCGCATGTTG AACAGGTCCG CCAAATTAGA TCCTGAGCTA AGAACTGAGT AAATTTTCTC AATCCAGGGC CCGGAGGCTC GGACCTTGGG CAATATTTCT GGAGCCTCCG ACAGCCAAAA GATTGAGGTT CGCCACACCA GGAACTCGGA GATGACGCGT CATGATTATG AAATCGCAAT CTTTGAAAGC AAGGGTGAAA TAAACCATGA AGGTTCAGCT AAGGCTGTGA TCGACTCTCC CCAGATAACT CCAACCCCTA ATCCGTGTAT AACCAAGGCA GACGTCACTC AGCGAAACAT TCCTCACCCT GCACCATCTC ATGCCGAGAG AAATGTAGAA GATTCATGCG TAGAAAATTA TAAGTCGTGG AAGGAGTTTC GTGGACGGAG AGGAGGAGGC TGTATGGGAC ACCAACGTGT ATCATTTTGT TTCGAGGGAG AGACACCTGA TGCCTCGTAT GAGCTTGTTG ACCGGCTTGG ATCCGTAGAC ATCAATAAGG CAGAAAGTGA ACTCGTAGGA CCTGGCTATA GAGAGCCTCA CCCTGTGAAA GCCATCAGGG CCAAACGACT CCGTAAGGTA ATAATAGTTG ACAAGCATTT GAACCGACTA ATTTCGTATC ATGCTGTTGG TACCCGCCTT CATTGATTTG CTTGGTCGGA ACATTAGTTG TTGTTCTCGT CACTTAGTTC TCCGTTGACT TCTTTGCCTT CCTGATATGT GGGCATTCAA GTTGATCATT GAATTCTTAC GTGGTTGAAT TCTTGGATAC AGCTAGCCAT GTAATATACA GTATTGTTAA TTTAGTGGCA GAAAACTTCT GACCTACTTT GGCTTCCTGC AACATGTTGA CAGGGAAGAG TGGAGTATTA TGTCAAATGG TAGGTGGTTT TATATTTCCA CTTTTCATGA CATTACTTTG GATACAGTTC ACAAAGTTTC TTCTGGTCTT TGTTGCTTGA TTGTTCAATG ATCACAAGTC TATGTATATT CAAACTAGAA TCTGAGCTGG AAACTTCCTT AATAGTCTAG TTGTTTTTTT TTTTTTGGCG TGACCCGGTT GGTTCAAAGT AATGAGCTAC ATAGGTTGAC TCCTATATTA AACCTATCGT CCTATCTATC CAATTACAGG TTAAATGAAT CTGGGTTTAC ACCGGCCACT TGGGAGCCAC ATCAGAACTT TCGAGATTGT GAATGCCTCG AAATTTTCGA GAAGAAATGC GCTGCTTTCA TTGCAGCGGA CAGATTGAAG GTGGCAGGAA AAGATCGGGG CACTTCAAAC TTCAAAGTCA ATACCAATGC AGGAGATCGG CGATCATGGG AACCCGAAGA ATCAAATTAA TGTCCACGAT GTTGCTTGTC ACTGCGCACA CATGATCTGC CCATCCTATT TTCTACTTTT TTGCTTCCCT TCAGCTGTTA TTTGTTTGTG GACCCCATTC CTCGCAGAAA AATTGATACA AGCTAAAAAT TCGTCTTAGT AGTATCTTTG ACCGCCATAC ACCCACTGCA CTCAGAGGAG CACACATACA GTCTTAATGC TAAGTGTATC AATTTGTTTT GTTTGATAAT GGAACTTTTT TTCATCGCTA CTTTGTAACA GATGGGCAAT TTCATAAAAT GGA |
mRNA UTR + CDS |
| >Mp5g24140.1 AAAACGAGAA GATTTGCAAT CGGCTGTTTT TTTCCTAAGC TATTCGCAGT CTTCGAGCAG GATCTACGGA TAGTAGTAGC GTCGAGCTGA AGCTTCACCT TCATCGAGCT AGCATTTCGA TCTCTGTTAG CAACAACATT TAGCTGGAAG ATTTTCATCT AGAGCTCTGT AAGATGCCGA GAAGAGGATC ATATCACAGG AAAGCAAAGG CAGGAAGATC CAAATATGTT GAACCATTGA TGGTAGGAAT GAATTCTACC GATTCTGAAG TTCAGCGACC CAACAATATT GCACCATGCA ACGATGGAGT GTTTCCTTTC CAATCTGAAG TTCAGCGACC CAACAATAGT GCACCATTCG ACGATGGAGT GTTTCCTTTC CAATCTGAAG TTCAGCGACC CAACAATAGT GCACCATTCG ACGATGGGGT GTTTCCTCCC CAACATGAAG TTTGGCGATC CAACTATATT GCACCATACG ACGATGGAAA GAGTTCTATC TATGAATCTA AATCAATCGA TCATTGGAAT GATGATTATG ATGAAAGTAG ATGGAATAAT GGACGAGGAT ACGGCTACTG GACTTCGGAC TCAGAGGACA ACTACCCACC TCCTGACTTC ACAACTGGAC CCGCACCTCC TGAAGACGAC GCAACTGTGC TGACAACTGC TGAGGCACCT TCCAACGAGG CCACACATGT TGTCACACCT GTTTACACAC CTGCTGAAGA TCTGAACTTT AAATCCATCC ATTCGTTAAA ATCTAATCCG GAGGAAAAAG AGAAGAAAAT TCCGCACTTC CAGATGAAGA ATACGATATC TCACATATGC AATGAATTAC AAGAGTATGA AACATTTCAA GGTAAGGAGT TAACAAGACA TCGTCACACG CCGAAAGGTT GCAGCTCTTG TATTTCGACC AAATTCGAAA TCAAAAGCGA CGGAACAAAG ACTTGGGAGA TAGTTCTGTC AAGTACGCAG AAGCTTTCAA ATAGTTCTGT TAATGCCGCC ATCAACCATG TAGAACAAGT TCTGAAGACG TCGCAGGGCC CGGAGGCTCG GACCTTGGGC AATATTTCTG GAGCCTCCGA CAGCCAAAAG ATTGAGGTTC GCCACACCAG GAACTCGGAG ATGACGCGTC ATGATTATGA AATCGCAATC TTTGAAAGCA AGGGTGAAAT AAACCATGAA GGTTCAGCTA AGGCTGTGAT CGACTCTCCC CAGATAACTC CAACCCCTAA TCCGTGTATA ACCAAGGCAG ACGTCACTCA GCGAAACATT CCTCACCCTG CACCATCTCA TGCCGAGAGA AATGTAGAAG ATTCATGCGT AGAAAATTAT AAGTCGTGGA AGGAGTTTCG TGGACGGAGA GGAGGAGGCT GTATGGGACA CCAACGTGTA TCATTTTGTT TCGAGGGAGA GACACCTGAT GCCTCGTATG AGCTTGTTGA CCGGCTTGGA TCCGTAGACA TCAATAAGGC AGAAAGTGAA CTCGTAGGAC CTGGCTATAG AGAGCCTCAC CCTGTGAAAG CCATCAGGGC CAAACGACTC CGTAAGGGAA GAGTGGAGTA TTATGTCAAA TGGTTAAATG AATCTGGGTT TACACCGGCC ACTTGGGAGC CACATCAGAA CTTTCGAGAT TGTGAATGCC TCGAAATTTT CGAGAAGAAA TGCGCTGCTT TCATTGCAGC GGACAGATTG AAGGTGGCAG GAAAAGATCG GGGCACTTCA AACTTCAAAG TCAATACCAA TGCAGGAGAT CGGCGATCAT GGGAACCCGA AGAATCAAAT TAATGTCCAC GATGTTGCTT GTCACTGCGC ACACATGATC TGCCCATCCT ATTTTCTACT TTTTTGCTTC CCTTCAGCTG TTATTTGTTT GTGGACCCCA TTCCTCGCAG AAAAATTGAT ACAAGCTAAA AATTCGTCTT AGTAGTATCT TTGACCGCCA TACACCCACT GCACTCAGAG GAGCACACAT ACAGTCTTAA TGCTAAGTGT ATCAATTTGT TTTGTTTGAT AATGGAACTT TTTTTCATCG CTACTTTGTA ACAGATGGGC AATTTCATAA AATGGA |
CDS |
| >Mp5g24140.1 ATGCCGAGAA GAGGATCATA TCACAGGAAA GCAAAGGCAG GAAGATCCAA ATATGTTGAA CCATTGATGG TAGGAATGAA TTCTACCGAT TCTGAAGTTC AGCGACCCAA CAATATTGCA CCATGCAACG ATGGAGTGTT TCCTTTCCAA TCTGAAGTTC AGCGACCCAA CAATAGTGCA CCATTCGACG ATGGAGTGTT TCCTTTCCAA TCTGAAGTTC AGCGACCCAA CAATAGTGCA CCATTCGACG ATGGGGTGTT TCCTCCCCAA CATGAAGTTT GGCGATCCAA CTATATTGCA CCATACGACG ATGGAAAGAG TTCTATCTAT GAATCTAAAT CAATCGATCA TTGGAATGAT GATTATGATG AAAGTAGATG GAATAATGGA CGAGGATACG GCTACTGGAC TTCGGACTCA GAGGACAACT ACCCACCTCC TGACTTCACA ACTGGACCCG CACCTCCTGA AGACGACGCA ACTGTGCTGA CAACTGCTGA GGCACCTTCC AACGAGGCCA CACATGTTGT CACACCTGTT TACACACCTG CTGAAGATCT GAACTTTAAA TCCATCCATT CGTTAAAATC TAATCCGGAG GAAAAAGAGA AGAAAATTCC GCACTTCCAG ATGAAGAATA CGATATCTCA CATATGCAAT GAATTACAAG AGTATGAAAC ATTTCAAGGT AAGGAGTTAA CAAGACATCG TCACACGCCG AAAGGTTGCA GCTCTTGTAT TTCGACCAAA TTCGAAATCA AAAGCGACGG AACAAAGACT TGGGAGATAG TTCTGTCAAG TACGCAGAAG CTTTCAAATA GTTCTGTTAA TGCCGCCATC AACCATGTAG AACAAGTTCT GAAGACGTCG CAGGGCCCGG AGGCTCGGAC CTTGGGCAAT ATTTCTGGAG CCTCCGACAG CCAAAAGATT GAGGTTCGCC ACACCAGGAA CTCGGAGATG ACGCGTCATG ATTATGAAAT CGCAATCTTT GAAAGCAAGG GTGAAATAAA CCATGAAGGT TCAGCTAAGG CTGTGATCGA CTCTCCCCAG ATAACTCCAA CCCCTAATCC GTGTATAACC AAGGCAGACG TCACTCAGCG AAACATTCCT CACCCTGCAC CATCTCATGC CGAGAGAAAT GTAGAAGATT CATGCGTAGA AAATTATAAG TCGTGGAAGG AGTTTCGTGG ACGGAGAGGA GGAGGCTGTA TGGGACACCA ACGTGTATCA TTTTGTTTCG AGGGAGAGAC ACCTGATGCC TCGTATGAGC TTGTTGACCG GCTTGGATCC GTAGACATCA ATAAGGCAGA AAGTGAACTC GTAGGACCTG GCTATAGAGA GCCTCACCCT GTGAAAGCCA TCAGGGCCAA ACGACTCCGT AAGGGAAGAG TGGAGTATTA TGTCAAATGG TTAAATGAAT CTGGGTTTAC ACCGGCCACT TGGGAGCCAC ATCAGAACTT TCGAGATTGT GAATGCCTCG AAATTTTCGA GAAGAAATGC GCTGCTTTCA TTGCAGCGGA CAGATTGAAG GTGGCAGGAA AAGATCGGGG CACTTCAAAC TTCAAAGTCA ATACCAATGC AGGAGATCGG CGATCATGGG AACCCGAAGA ATCAAATTAA |
Protein |
| >Mp5g24140.1 MPRRGSYHRK AKAGRSKYVE PLMVGMNSTD SEVQRPNNIA PCNDGVFPFQ SEVQRPNNSA PFDDGVFPFQ SEVQRPNNSA PFDDGVFPPQ HEVWRSNYIA PYDDGKSSIY ESKSIDHWND DYDESRWNNG RGYGYWTSDS EDNYPPPDFT TGPAPPEDDA TVLTTAEAPS NEATHVVTPV YTPAEDLNFK SIHSLKSNPE EKEKKIPHFQ MKNTISHICN ELQEYETFQG KELTRHRHTP KGCSSCISTK FEIKSDGTKT WEIVLSSTQK LSNSSVNAAI NHVEQVLKTS QGPEARTLGN ISGASDSQKI EVRHTRNSEM TRHDYEIAIF ESKGEINHEG SAKAVIDSPQ ITPTPNPCIT KADVTQRNIP HPAPSHAERN VEDSCVENYK SWKEFRGRRG GGCMGHQRVS FCFEGETPDA SYELVDRLGS VDINKAESEL VGPGYREPHP VKAIRAKRLR KGRVEYYVKW LNESGFTPAT WEPHQNFRDC ECLEIFEKKC AAFIAADRLK VAGKDRGTSN FKVNTNAGDR RSWEPEESN |