Mp6g00800
Description
Annotation
| Database | ID | Description |
|---|---|---|
| PANTHER | PTHR48178 | PEROXISOME BIOGENESIS FACTOR 2 |
| CDD | cd16526 | RING-HC_PEX2 |
| Pfam | PF04757 | Pex2 / Pex12 amino terminal region |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. |
| SUPERFAMILY | SSF57850 | RING/U-box |
| KEGG | K06664 | peroxin-2 |
| KOG | KOG2879 | Predicted E3 ubiquitin ligase; [O] |
| MapolyID | Mapoly0052s0120 | - |
| GO | GO:0007031 | peroxisome organization |
| GO | GO:0005778 | peroxisomal membrane |
| GO | GO:0016558 | protein import into peroxisome matrix |
| GO | GO:0008270 | zinc ion binding |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpPEX2 | PEX2, RING complex | Published |
Associated Literature (AI-based literature mining, Beta-version)
PEX2, RING complex; RING complex (from nomenclature)
0 core 1 peripheral
Goto-Yamada, S., et al. (2022)
· Frontiers in Cell and Developmental Biology review citation background
M. polymorpha PEX2 (peroxin/peroxisome biogenesis)
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp6g00800 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp6g00800.1 ACCAACCCTT TTGCCAAAAT GGTGCACCGC TGGGCCCTGC CCTGCCCTGC TTCGCTTGGC TGTGCTTTGG CCTGAGCCCG ACGTGAACGA TGTGCAGCGT CGAGACAAGA GCAGACGACG GGCGAGGACG ACGCAATCCC GATGCTCTCC TCTTCGCCAA TTTGCGCTGA CATTCGTACG TCGCGTCAGA GCCGACAGCC GAATCCGTGG TCACTTTGAT TCGTCTGATC GATTGATAGT ATGTTTGATT AATCGATTCT TTGCTCGATG AAAGATGACG ACGATGTGAA CGAATCTCAC GTTCATGGCG TTGGGATTGA GTGCTCGAAA TTGTTGAAGT CATGCTACAG CAGGGTTTCT GGATTCCAGG GCTTTGAGGT GTGTAATTGA AGATGGAAAT ACAACCGGCT ATGAGTGTGG AGGAGCCCAT CCGTCCTCCA CCACCTGTTG ATGCATGGCA ACATGCGTAC CAAGCCGTGG CTCCGTCGTT GGAGTCTCTC AGGCTTACTC TGAAGGTGAA TTTTGTTGTT TCATAGTTAA TTTGAATCTT TATGGCAAGG AAAATATCAG CTAGGAGTTT TGTGTTTCAC AGGGTAAGGT GGAGATCCAT TTGACTAATC TGGTTGTTTG GAGTGCTTCA GAGGCCCCCG CAAGTGAACA TTTTGCGAGT TAATCAAATT GATGCCGCAA GACTGGATGT GGAGATGACT GCCATGCTCA GAGAACAATT GATGAAAGTG TTCTCCTTGG CGCAGGTATG GACTTTACTG GTCCCTGTTC TGGCCTGAGG TGAAGAAGTT GTTCCTTGAC CTATTCCGTA GAAAAAATCA AACTTCCATT CCCATTATAC AGCTGAATTT TGGGAAATTC CTTCCCTTTC TGTCAAGGGT GTTCATAAGG CTTGATTTTG TGCAGCCAGG TTTGCTCCTG CGGTACGAAC CAGAGCTCAA TGCGTTCCTG GAGTTACTTG TTTGGAGATT TTCTATTTGG GTAGATCGGC CTACTCCAGG CAGCGCTCTT ATGAATCTTC GCTACAGAGA CGAGCGTACT TACAGTGCTC TCGCTTCAGC TGGAAAAGGT TATATTTTTC ACCTCTGTGC TCAAAAACGG AGATTCTGTG CATTTTTCCT CTGTCTTCAC GTTTAGTAAG GATATTTTCT TAAATGCATG GCTGTGGTCT GCAGTGTCAG GAAATAAGAT ATCGAACTGA GCGTAAACAA CTGCCTTCTC ATTCTGTATC TATCTAGCGT TTCCTGTTAG GATTATCACG AATCATAGGC CACATAGTCC AGAAAGGTTC GTGTGTTTCC TAATGCAGGC AGGTCGAAGA CTGGTCTGAA GAATGTAGGT TCAAAATGGG GACTTATACC AAATACCGAG TCTCTACTTA ATTATGATGT GCAATGTCAC AGTTAGTATT TGTATTAGCT TGCAAAGTAG AAAGTATGCT TTTAAGCAAC CTCATGTTGT GCTTCAGTCT ACTAGGTGAA CTGAAATGGA GCAGTCGTTA TATATGTGTT GACATATTGT TTGTGTTAAT GACTTGATGG TTGCAGTGCG AAACGGTTTA GAGGGTCCAG GTCTGACCAA GTTTCAAAAA TTATCTTATT GCCTGGCTAT GGTTGGTGGA CGTTATGGTT GGAACCGTCT ACAAAACCTG TCTGCTTTTC AACGCTGGGG CGACAGTGAT CGCGTAAGTA TTGATCCCCC TTGGTTTTTT TTTTTTGGGT GCTGCTGTCG TTTATTTTCA CGAATATCAG ATACGCCTTT GAGAAGGTTT TTGCTTCTTT TAACTAAGAG GTTTTGGTCT TATCTTTTGC TGACACAGAG CTCCTGGGCT CGCCGAGCAT GGGGTTTTCT ACAAAAGTCC GAAAGCATGT ACAAAGTTGC TTGCTTTTTT AATCTTATCG TGTTTCTACA CACAGGGAGG TAAGCAGGTT ACTAAATAGA GGTGCTTAGT ATAATTTGAC CGATTGAATA TGGAAATTGC TGACGCTTTG TATTTTGGGC AATTATATTC TTATTGGTAT TTAAGCAGTT GTCAGTACTG GTATGTCAGC CAAGTCGGTT CTTTCGATAC CTGGTCGAAC AAGTAGACTT GTGTTTTTCT TTTCTAAGGT TGAAGTACTC ATGGATTTGC AACAGGTATC GATGCATCGT CGAGAGGATA CTGAAAGCAA GACTCGTTTA CGAGAGACCT GCCATGAATA GAGCGGTGAG CTTTGAGTAC ATGAATCGGC AGCTTGTCTG GCATGAATTT TCGGTAAGGA CAGTTTACCA GCCTAAGCAT TCTCCTTATC TGTGGAAGTG CAGGTGTAGC AAGCTGAGTA ACATGGCCGT ATTAAAATGT GACTACTGAT CAGTTACTGA GATGAATTTA TTCAGTTATC AGTTCCTGTG ATCAAATGAA CGATGTGAAA TTGATATTCT CATCTTTGTA CCTGACCAAG AAGTTGGATG TCTGCAGGAA CTTCTTTTGC TTGTGTTACC GCTCCTGAAC ATGCTGTCTT TTAGGAAAGT GCTCTCATTT TCCTTCTCGG GAAGGCAAAC TCCGTCTGCC GACTTTAGAG AAGATAAGTG TCCAATTTGT GAGGCATCGC CTATCACAGT GCCCTATAAA GCCGTGCCAT GCGGCCATCT TTACTGTTAT TTCTGTTTAC GTACTAGATG CATATCCAAT CATTCATATC GTTGTGTTAG GTGTGAAGTT CAAGTGACAG GTATGCAACG TCATCAAGAG CGAGTTAGTC TAGAAGGGAT GGATAGAAGA CCTGACTGAA TTTCTATTAT TTGTATACTT AAGATATCCC ATTTCTGTTT AGATCACTAT ATATGTTGTC GATGTTCCAC AACGGATAAT GATTTCGTCG CGTGATGGAT ATATTTTCGA GCTTTCACCT |
mRNA UTR + CDS |
| >Mp6g00800.1 ACCAACCCTT TTGCCAAAAT GGTGCACCGC TGGGCCCTGC CCTGCCCTGC TTCGCTTGGC TGTGCTTTGG CCTGAGCCCG ACGTGAACGA TGTGCAGCGT CGAGACAAGA GCAGACGACG GGCGAGGACG ACGCAATCCC GATGCTCTCC TCTTCGCCAA TTTGCGCTGA CATTCGTACG TCGCGTCAGA GCCGACAGCC GAATCCGTGG TCACTTTGAT TCGTCTGATC GATTGATAGT ATGTTTGATT AATCGATTCT TTGCTCGATG AAAGATGACG ACGATGTGAA CGAATCTCAC GTTCATGGCG TTGGGATTGA GTGCTCGAAA TTGTTGAAGT CATGCTACAG CAGGGTTTCT GGATTCCAGG GCTTTGAGGT GTGTAATTGA AGATGGAAAT ACAACCGGCT ATGAGTGTGG AGGAGCCCAT CCGTCCTCCA CCACCTGTTG ATGCATGGCA ACATGCGTAC CAAGCCGTGG CTCCGTCGTT GGAGTCTCTC AGGCTTACTC TGAAGAGGCC CCCGCAAGTG AACATTTTGC GAGTTAATCA AATTGATGCC GCAAGACTGG ATGTGGAGAT GACTGCCATG CTCAGAGAAC AATTGATGAA AGTGTTCTCC TTGGCGCAGC CAGGTTTGCT CCTGCGGTAC GAACCAGAGC TCAATGCGTT CCTGGAGTTA CTTGTTTGGA GATTTTCTAT TTGGGTAGAT CGGCCTACTC CAGGCAGCGC TCTTATGAAT CTTCGCTACA GAGACGAGCG TACTTACAGT GCTCTCGCTT CAGCTGGAAA AGTGCGAAAC GGTTTAGAGG GTCCAGGTCT GACCAAGTTT CAAAAATTAT CTTATTGCCT GGCTATGGTT GGTGGACGTT ATGGTTGGAA CCGTCTACAA AACCTGTCTG CTTTTCAACG CTGGGGCGAC AGTGATCGCA GCTCCTGGGC TCGCCGAGCA TGGGGTTTTC TACAAAAGTC CGAAAGCATG TACAAAGTTG CTTGCTTTTT TAATCTTATC GTGTTTCTAC ACACAGGGAG GTATCGATGC ATCGTCGAGA GGATACTGAA AGCAAGACTC GTTTACGAGA GACCTGCCAT GAATAGAGCG GTGAGCTTTG AGTACATGAA TCGGCAGCTT GTCTGGCATG AATTTTCGGA ACTTCTTTTG CTTGTGTTAC CGCTCCTGAA CATGCTGTCT TTTAGGAAAG TGCTCTCATT TTCCTTCTCG GGAAGGCAAA CTCCGTCTGC CGACTTTAGA GAAGATAAGT GTCCAATTTG TGAGGCATCG CCTATCACAG TGCCCTATAA AGCCGTGCCA TGCGGCCATC TTTACTGTTA TTTCTGTTTA CGTACTAGAT GCATATCCAA TCATTCATAT CGTTGTGTTA GGTGTGAAGT TCAAGTGACA GGTATGCAAC GTCATCAAGA GCGAGTTAGT CTAGAAGGGA TGGATAGAAG ACCTGACTGA ATTTCTATTA TTTGTATACT TAAGATATCC CATTTCTGTT TAGATCACTA TATATGTTGT CGATGTTCCA CAACGGATAA TGATTTCGTC GCGTGATGGA TATATTTTCG AGCTTTCACC T |
CDS |
| >Mp6g00800.1 ATGGAAATAC AACCGGCTAT GAGTGTGGAG GAGCCCATCC GTCCTCCACC ACCTGTTGAT GCATGGCAAC ATGCGTACCA AGCCGTGGCT CCGTCGTTGG AGTCTCTCAG GCTTACTCTG AAGAGGCCCC CGCAAGTGAA CATTTTGCGA GTTAATCAAA TTGATGCCGC AAGACTGGAT GTGGAGATGA CTGCCATGCT CAGAGAACAA TTGATGAAAG TGTTCTCCTT GGCGCAGCCA GGTTTGCTCC TGCGGTACGA ACCAGAGCTC AATGCGTTCC TGGAGTTACT TGTTTGGAGA TTTTCTATTT GGGTAGATCG GCCTACTCCA GGCAGCGCTC TTATGAATCT TCGCTACAGA GACGAGCGTA CTTACAGTGC TCTCGCTTCA GCTGGAAAAG TGCGAAACGG TTTAGAGGGT CCAGGTCTGA CCAAGTTTCA AAAATTATCT TATTGCCTGG CTATGGTTGG TGGACGTTAT GGTTGGAACC GTCTACAAAA CCTGTCTGCT TTTCAACGCT GGGGCGACAG TGATCGCAGC TCCTGGGCTC GCCGAGCATG GGGTTTTCTA CAAAAGTCCG AAAGCATGTA CAAAGTTGCT TGCTTTTTTA ATCTTATCGT GTTTCTACAC ACAGGGAGGT ATCGATGCAT CGTCGAGAGG ATACTGAAAG CAAGACTCGT TTACGAGAGA CCTGCCATGA ATAGAGCGGT GAGCTTTGAG TACATGAATC GGCAGCTTGT CTGGCATGAA TTTTCGGAAC TTCTTTTGCT TGTGTTACCG CTCCTGAACA TGCTGTCTTT TAGGAAAGTG CTCTCATTTT CCTTCTCGGG AAGGCAAACT CCGTCTGCCG ACTTTAGAGA AGATAAGTGT CCAATTTGTG AGGCATCGCC TATCACAGTG CCCTATAAAG CCGTGCCATG CGGCCATCTT TACTGTTATT TCTGTTTACG TACTAGATGC ATATCCAATC ATTCATATCG TTGTGTTAGG TGTGAAGTTC AAGTGACAGG TATGCAACGT CATCAAGAGC GAGTTAGTCT AGAAGGGATG GATAGAAGAC CTGACTGA |
Protein |
| >Mp6g00800.1 MEIQPAMSVE EPIRPPPPVD AWQHAYQAVA PSLESLRLTL KRPPQVNILR VNQIDAARLD VEMTAMLREQ LMKVFSLAQP GLLLRYEPEL NAFLELLVWR FSIWVDRPTP GSALMNLRYR DERTYSALAS AGKVRNGLEG PGLTKFQKLS YCLAMVGGRY GWNRLQNLSA FQRWGDSDRS SWARRAWGFL QKSESMYKVA CFFNLIVFLH TGRYRCIVER ILKARLVYER PAMNRAVSFE YMNRQLVWHE FSELLLLVLP LLNMLSFRKV LSFSFSGRQT PSADFREDKC PICEASPITV PYKAVPCGHL YCYFCLRTRC ISNHSYRCVR CEVQVTGMQR HQERVSLEGM DRRPD |