Mp6g03890
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Pfam | PF00190 | Cupin |
| SMART | SM00835 | Cupin_1_3 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls |
| PANTHER | PTHR31238 | GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 |
| PRINTS | PR00325 | Germin signature |
| SUPERFAMILY | SSF51182 | RmlC-like cupins |
| CDD | cd02241 | cupin_OxOx |
| MapolyID | Mapoly0034s0129 | - |
| GO | GO:0030145 | manganese ion binding |
| GO | GO:0005618 | cell wall |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpPR15h | Pathogen related | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp6g03890 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp6g03890.1 CAGATCAAAC CGCAACAATC ATTACTCATT ACTGATTGCG CATGTCCCAA ACTTATCTCT AAGTCTCACT CGGCTACAAT TCAGATTTAC TTCAGCATTC GAGGTTTTGA ACACTGTCCG GTGGATTTTG AGTTCACGTC CAAGACCACT CCTGTTCGCT CTTAGTGCAC AACGCAGACG GCGAGGACGG ATCTCTCCCA GAACCACCGC AATATATCGG CGATGAAGCT CCTTGCTGCT ATGATCCTTG CAGCTGGACT GCTGTCAGCT GTCCACATTG TCCTTGCAGC GGATGCTGAC CCACTGCAGG ATTTCTGCAT CGCAGACATT GCTGCCGGAC CAGTTTCAAA TGGGTTCCCT TGCAAGTTGC CTGTACTTGC TTCCACAGAC GACTTTGCAT TTTCTGGGCT TGCTGAAGCT GCAGATCCCA GCGTATATGC TACCAACGGA AGTGCAACCC TCGCCTTCGT CAGAGAATGG CCAGCTCTGA ACACTCAGGG ATTGTCTCTC ATAAGACTCG ATATCAATCC TGGTGGCATC ATCTTTCCCC ATACACACAA CTTGGCCACT GAGATTCTGT ATGTGTTGGA GGGAGAGATG TATACGGGCT TCGTCACCAA CAACTTCGGA AACGACCCAA CCATATCTAA CAAGCTGTAT GCAAAGGTCG TGAAGAAGGG AGAAGCTTTC ATTTTTCCCA GAGGTCTGCT ACACTTCCAG CTGAACAAGG GGAAGGTGCT TGCATCGAGT CTGAACGTCC TGAACAGTCA GAATCCTGGA ATTCAGCTCA TGCCTTCAGC GTTGTTCGGA AGTGGCATCG ACCGTGAAAT GCTGGAAAAG TCATTCTTCA TGAGTGAAGC TCAAGTTGCT GCACTGGAAA CCATTTTCCA GCAGTGAAAC GTTGAATTAT TGAGGTGCCA GGAGAAATCT GAGACTTTCC TGGCATTGAG ACAACCTGCG TGCAGATGTA CAAATTCAGT TACGTAGAAT TATGTCCGAC AGCCCATTGA AAGCATTTGA TTGATCAGCT TGGTATAACA AACATTGATC TCAGGTGCTG AACGTTGAGT TCATTCTTCA CCGTTTGTAA TTGTACTTTC GTTTTATACC TTTTTCATGA ACACCGTGTA CTCCAACTCA CATTTACGTT GTCCTGAATT CTACGCATTG TGCTCATTCC GTGATATATT CAACTTAACC TTATAATCTG ATACCATTAG TAAGGATTCA TTTAGGCAGA GTTTTGACAT GTAATTAGCT ATGGGCAGCA GAAAACGTTC ATTAGACTTC AGATACAAAG CATTTGCTTA ATGAAAGCAG TGACGTGTGT CAAGGTTGAT TCGGGGACTT CTACGTCTTG ATAACGAGGA CAAACTGAAT GTCTGAATCT GATTCGCATG CTTCCACTCG GAATGGATCT GCAGTAGTGG ATCTGTATTT CAGCTTCGTG TGATGACGTT CTCGTCTAAT CACAAGC |
mRNA UTR + CDS |
| >Mp6g03890.1 CAGATCAAAC CGCAACAATC ATTACTCATT ACTGATTGCG CATGTCCCAA ACTTATCTCT AAGTCTCACT CGGCTACAAT TCAGATTTAC TTCAGCATTC GAGGTTTTGA ACACTGTCCG GTGGATTTTG AGTTCACGTC CAAGACCACT CCTGTTCGCT CTTAGTGCAC AACGCAGACG GCGAGGACGG ATCTCTCCCA GAACCACCGC AATATATCGG CGATGAAGCT CCTTGCTGCT ATGATCCTTG CAGCTGGACT GCTGTCAGCT GTCCACATTG TCCTTGCAGC GGATGCTGAC CCACTGCAGG ATTTCTGCAT CGCAGACATT GCTGCCGGAC CAGTTTCAAA TGGGTTCCCT TGCAAGTTGC CTGTACTTGC TTCCACAGAC GACTTTGCAT TTTCTGGGCT TGCTGAAGCT GCAGATCCCA GCGTATATGC TACCAACGGA AGTGCAACCC TCGCCTTCGT CAGAGAATGG CCAGCTCTGA ACACTCAGGG ATTGTCTCTC ATAAGACTCG ATATCAATCC TGGTGGCATC ATCTTTCCCC ATACACACAA CTTGGCCACT GAGATTCTGT ATGTGTTGGA GGGAGAGATG TATACGGGCT TCGTCACCAA CAACTTCGGA AACGACCCAA CCATATCTAA CAAGCTGTAT GCAAAGGTCG TGAAGAAGGG AGAAGCTTTC ATTTTTCCCA GAGGTCTGCT ACACTTCCAG CTGAACAAGG GGAAGGTGCT TGCATCGAGT CTGAACGTCC TGAACAGTCA GAATCCTGGA ATTCAGCTCA TGCCTTCAGC GTTGTTCGGA AGTGGCATCG ACCGTGAAAT GCTGGAAAAG TCATTCTTCA TGAGTGAAGC TCAAGTTGCT GCACTGGAAA CCATTTTCCA GCAGTGAAAC GTTGAATTAT TGAGGTGCCA GGAGAAATCT GAGACTTTCC TGGCATTGAG ACAACCTGCG TGCAGATGTA CAAATTCAGT TACGTAGAAT TATGTCCGAC AGCCCATTGA AAGCATTTGA TTGATCAGCT TGGTATAACA AACATTGATC TCAGGTGCTG AACGTTGAGT TCATTCTTCA CCGTTTGTAA TTGTACTTTC GTTTTATACC TTTTTCATGA ACACCGTGTA CTCCAACTCA CATTTACGTT GTCCTGAATT CTACGCATTG TGCTCATTCC GTGATATATT CAACTTAACC TTATAATCTG ATACCATTAG TAAGGATTCA TTTAGGCAGA GTTTTGACAT GTAATTAGCT ATGGGCAGCA GAAAACGTTC ATTAGACTTC AGATACAAAG CATTTGCTTA ATGAAAGCAG TGACGTGTGT CAAGGTTGAT TCGGGGACTT CTACGTCTTG ATAACGAGGA CAAACTGAAT GTCTGAATCT GATTCGCATG CTTCCACTCG GAATGGATCT GCAGTAGTGG ATCTGTATTT CAGCTTCGTG TGATGACGTT CTCGTCTAAT CACAAGC |
CDS |
| >Mp6g03890.1 ATGAAGCTCC TTGCTGCTAT GATCCTTGCA GCTGGACTGC TGTCAGCTGT CCACATTGTC CTTGCAGCGG ATGCTGACCC ACTGCAGGAT TTCTGCATCG CAGACATTGC TGCCGGACCA GTTTCAAATG GGTTCCCTTG CAAGTTGCCT GTACTTGCTT CCACAGACGA CTTTGCATTT TCTGGGCTTG CTGAAGCTGC AGATCCCAGC GTATATGCTA CCAACGGAAG TGCAACCCTC GCCTTCGTCA GAGAATGGCC AGCTCTGAAC ACTCAGGGAT TGTCTCTCAT AAGACTCGAT ATCAATCCTG GTGGCATCAT CTTTCCCCAT ACACACAACT TGGCCACTGA GATTCTGTAT GTGTTGGAGG GAGAGATGTA TACGGGCTTC GTCACCAACA ACTTCGGAAA CGACCCAACC ATATCTAACA AGCTGTATGC AAAGGTCGTG AAGAAGGGAG AAGCTTTCAT TTTTCCCAGA GGTCTGCTAC ACTTCCAGCT GAACAAGGGG AAGGTGCTTG CATCGAGTCT GAACGTCCTG AACAGTCAGA ATCCTGGAAT TCAGCTCATG CCTTCAGCGT TGTTCGGAAG TGGCATCGAC CGTGAAATGC TGGAAAAGTC ATTCTTCATG AGTGAAGCTC AAGTTGCTGC ACTGGAAACC ATTTTCCAGC AGTGA |
Protein |
| >Mp6g03890.1 MKLLAAMILA AGLLSAVHIV LAADADPLQD FCIADIAAGP VSNGFPCKLP VLASTDDFAF SGLAEAADPS VYATNGSATL AFVREWPALN TQGLSLIRLD INPGGIIFPH THNLATEILY VLEGEMYTGF VTNNFGNDPT ISNKLYAKVV KKGEAFIFPR GLLHFQLNKG KVLASSLNVL NSQNPGIQLM PSALFGSGID REMLEKSFFM SEAQVAALET IFQQ |