Mp6g03940



Description

Annotation

Database ID Description
Pfam PF07714 Protein tyrosine and serine/threonine kinase
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
SMART SM00220 serkin_6
PANTHER PTHR27007 -
Pfam PF00139 Legume lectin domain
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd06899 lectin_legume_LecRK_Arcelin_ConA
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
ProSiteProfiles PS50011 Protein kinase domain profile.
SUPERFAMILY SSF49899 Concanavalin A-like lectins/glucanases
Gene3D G3DSA:2.60.120.200 -
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
FunFam G3DSA:1.10.510.10:FF:000240 Lectin-domain containing receptor kinase A4.3
KOG KOG1187 Serine/threonine protein kinase; [T]
MapolyID Mapoly0034s0124 -
GO GO:0005524 ATP binding
GO GO:0030246 carbohydrate binding
GO GO:0005886 plasma membrane
GO GO:0004672 protein kinase activity
GO GO:0006468 protein phosphorylation

Nomenclature

Gene symbol Product Transcript ID Status
MpRLK-Pelle_L-LEC27 Receptor-like Kinase (RLK) Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp6g03940.1 chr6:5060587..5064387 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp6g03940 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp6g03940 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.