Mp6g04420
Description
Annotation
| Database | ID | Description |
|---|---|---|
| SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains |
| Gene3D | G3DSA:3.40.50.720 | - |
| Pfam | PF13288 | DXP reductoisomerase C-terminal domain |
| Gene3D | G3DSA:1.10.1740.10 | - |
| FunFam | G3DSA:1.10.1740.10:FF:000006 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic |
| Pfam | PF08436 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain |
| FunFam | G3DSA:3.40.50.720:FF:000183 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic |
| Hamap | MF_00183 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. |
| NCBIfam | TIGR00243 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase |
| Pfam | PF02670 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
| SUPERFAMILY | SSF55347 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| SUPERFAMILY | SSF69055 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| PANTHER | PTHR30525 | 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE |
| KEGG | K00099 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] |
| MapolyID | Mapoly0034s0078 | - |
| GO | GO:0051484 | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process |
| GO | GO:0008299 | isoprenoid biosynthetic process |
| GO | GO:0046872 | metal ion binding |
| GO | GO:0030604 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity |
| GO | GO:0005515 | protein binding |
| GO | GO:0070402 | NADPH binding |
| GO | GO:0030145 | manganese ion binding |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpDXR1 | Secondary metabolism enzyme, Terpene biosynthesis enzymes | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
MEP pathway step-2 enzyme whose localization was characterized in oil body cells in this work.
1 core 1 peripheral
Forestier ECF, Asprilla P, Bonter I, Romani F, Frangedakis E, Haseloff J. (2026)
· Communications biology research experimental subject
MEP pathway step-2 enzyme whose localization was characterized in oil body cells in this work.
Takizawa, R., et al. (2021a)
· Plant & Cell Physiology 62 528-537 research experimental background
1-deoxy-D-xylulose-5-phosphate reductoisomerase (non-mevalonate pathway); shown NOT involved in sesquiterpene synthesis.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp6g04420 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp6g04420.1 GACTGGATGT CGCAGGCGCA ACGACGCAGC AGCGCTCGTC GCAGCAGCAG CGCTCGTGCC TTGCTTTCCG AGAGTCCCTG CAGCAGACCA ACTCCGCGTC GGGGTCGGAG CAGCTGGAGC TGGAGCAGGA GGAGGAGGAG CAGGAGCAGG AGCGCGTGGG AGTCTTGCTT GATTGCTTGG GGGTCGCGGT GCCAGCGGAC GGAGTCGCGG ATTGTTGTTG CAGGATAGGC GGCGCGATTG GAGAGTGCTA GTTGGAGGTG TGCGGCATTT GGGTCCCATG GTGTGGGAGA GATAGCGCGG ACACTTGCGC AGGAGCTGTG TCATTGTGCT CGTGGTGTCG ATTGGAGTCG AGGTGTGCTC TGTGCAGCGT GGTTGTGTTT TGGAGAATTC GTCGGAATGG GTCTCGAGGC CGCTGCTATG GCGGGCATTT CGCCCGCTTC TTCTCTTCTG CCTTCTGCTC GGCGAAGCGC GGTGAGTGTC GTCGGGCCCA ATTTTCGCTA AGGGACTTAT TGTTTCTTCA CGACGTCGTG GTGGTCGTCG GAACACGTCA GGAGTGCTGA GAATTCTCGT TTTCATGTGC AGACCGAGCT TAGTCTGAGG GCGTCGGATA TGCCATCCTT TTCCGGTACC AAGTTAGCAG GTACATGTCG TTCCATGTTT GGGAAAGTCT GGAGATTGTC ACTTAAGACT GGGTTTCCCC CACTGTCTGG AATTTGATTC GAAAAGAATG GAATTCGCCC ATGTCAAGCA CGACCCGCTG TCCTCGTGCG TTTCATCTCT CGCTCAGGCG TAGTTTGGAA CCAGGGCTTC GTTCCTTGTG CTCTGTTTAC CTCGTTGTGT TTGAAATGAT GGAGAAGTTG AAGGATTCTT TGGCAGGTTT AACCGGTCGT AACGTGTTCA TTCAGGCGCT TGCACGTGGG GAAAATCGTC GAGAGTCTCC ACTGCTGGCA AAGGCGTGCA GTGTTCTTCC AATGGACCTC CTCCTGCTTG GCCTGGAAGA GCTGTAGACG ACGGAGTGAA AAAAAATTAT ACTGGACCCA AACCCATCTC TCTCATTGGG TCTACCGGGT CTATTGGTAC CCAGGTAGGG CAATTTCTGG AGACCTGTGT GCATCTGGTT CGCGCTTGTG AACCGACCTG TATCAGCCGA GGTTTTTCTT ATTGGACCTG TTTTTCAGAA TAAGGAACGA AGTTGGTTTT AGCACACAGA AACTCCAGCA TGGCATTGAG GAACTTGTGT TTGGGGTTGC AGTTTTTAAA TGAGCAATTT ATTTCATACG CTCGATTGTG GTCGTTTTTA AGCTAGGAGG AACTTTTTTC TTCGGGAGCA CATGAGTAAA CCTCCCACAA CGGGTCAACG CGATATTTCT GCTGAAAACG AGGGGCAACA ATTGGATCCT GCTGATGCTT TGGCCGTGTT TCTATTGACC GCAGACTCTG GACATCGTTC GTGAGAACCC TGATAAATTC AGGGTGGTCG CACTAGCCGC TGGTTCCAAT ATTACTCTGC TAGCTGATCA GGTAAACCTC CGAACTGGTT CGAAGGTTTC TAGCATATCG GTGGAAGTTT GCTGACGCAA AATGTGTGAT CTCGAGTCTG CAGTCCTACG GATTGAGGAA TCAATACCGT TTGAGATCAC AAAATGGTCT CTATATTTGT TTACTTTGTT GTCGGAAAGT GACTAAGAAG TAAGATTGGG ATGGCTTTAT TTGAATTGAA GGTGAGGACG TTCAAACCCA GTTTGGTTTG TGTGCGTCAT GGAGACCGAG TTGCCGAGCT GAAGGAAGCT ATTGCCGATG TTTACCCTCA GCCCGAGATC GTGGTCGGTG ACTCTGGGAT TGTAGAGGTG CGAATCAGAC GTCCTCACTT GTTACCCTTC TTCATGCTCG GCTACCTGAT GTCTTGTTTA TTGTTTGCCT TTTGATACTG TTCTTGTCAT TGAGCATGTC GGGATAATGT ATCAGGGAAC TACACCACTT TTCTCCTGCC TCTTTGTCGC CCATGTATTG AATTCTGTTC ACCTGTGGCA CTTCGTGCTG AGTTGTTGTC TAAATCTGAA AATGTGGAGA GTTTACAGGT TGCCCAACAT CCCGAAGCCG TCACAGTGGT CACTGGAATC GTCGGCTGTG CTGGTCTGAA GGTTGGCTAT TACCCTCCGA TCCTCTTAAT AATCATTTTG TTGAAATAGA GAGGATTTTG TTCATTAATC CCCAGTGTGC AAGGTTGGTA CGATTATTTT GTCCATTGTA AGCGACTCTC ACTTTGAAAA CTAATCACGA CTCTCTGTTC GTCCAGCCCA CTGTTGCAGC TATCGAAGCA GGAAAAGACA TAGCTTTAGC AAATAAGGAA ACTTTGATCG CCGGAGGTCC TTATGTACTA CCCCTTGCCA AGAAATATGG CAGCAAAATT TTGCCTGCCG ATTCCGAGCA TTCAGCTATT TTTCAGGTAC ATTTTCAAAT TCTCTTCTAC AATTTGTATC CTTGTGTAGT TATCGAGTGA CGTAAACGTG TGCCTGACTT GTGTTGTACT TGTCCGATAT CACGTTTCTG ATGAGCATGT GTTTGATATT CCAGTGTATT CAAGGTTTGC CAGAAGGTGG ACTGAGACGC ATCATCCTCA CAGCATCTGG GGGTGCCTTT AGGTATGAAT TGTAGATTCC TGCTTCTCTG TCAAATGAGT AAAACGCTTG TTACTGAGTA TGCTGAAATG AATGACTTGA CTGTCCAGGG TTTTAGCTTC TGGATGTAAA CCCTACTATG ATGTTAATAT GACACAACCG ATGTCGGATG TCATCTTGTA GGGATTGGCC TGTGGAGAAA TTGAAAGACG TCAAGGTGGC CGATGCTCTG AAACATCCAA ACTGGAGCAT GGGCAGGAAA ATCACTGTTG ACTCAGCCAC TCTGATGAAT AAGGTATATA GTGCTGTCTT TATGCTTGTG AGATGGACCT TGTTCTTGTG AATGTTGCAA GGGAGTGCTG CCGCAAGAGT TCTTCCTGTA TGTCCCTGTC CCGGTCTTCC TGATACGGTG TTCCACTTTC AAAAGGGTTT GGAAGTTATT GAGGCTCACT ACCTCTTCGG AGCTGAGTAC GATGACATCG AGATAGTCAT CCATCCGCAA TCGATCGTCC ATTCCATGGT CGAAACACAG GTAAGATTTT ACTCTATAGC TGTGAACGTT CTTAACTCCC GTTTCCTCCT GTTATATGCA TTTATGCACG AATTGTATTC TCGCACATGG ATTTGTAGAG CACCTTCACC TCCAAATTTT TTTTCGTACG GTTTGTCTTC AAATTTCATG CACCCACTTA AATGAGTCAT GCTCAGCAGT TGAGTACACA ATCTACTGGA GAAGTGGACC TTTAAAAGAC AGCGTTCTAT TTTCCCTGGA ATCTTCACTC GCCCAAATCC GTAGTTTGGT GTTCTATCCA GTTGAGCTGC TTTCATATGC CAATTCAAAA GTAAAATCTT AAGCATGCAG CTGCTTATTT TCTTGGTTTT ATTTGTCTGC AGGATTCTTC TGTCCTTGGC CAGATGGGAT GGCCAGATAT GAGGTTACCT ATTCTTTATA CCTTGTCATG GCCTGAACGT GTTTCTTGCT CGGAGAGCAC TTGGCCCCGC CTTGATTTCG TGAAGTACGT TCTGTCACCA ACTCAAAGTT TCATTGGAGT CGGTTGTTTA GATAGGCTAG AACGGACAAC CAGCGCCTGA CTGACCTGAC CAGAAGGGAG AAGTGTCGAG TGTTCGACGT CCTTGGAAGC TCTTGCATCT ATGACATTGA ACTCAATTCT TATGGATGGA CATGGCGCGA TTCTAGATTC AAAAGGATAT TCGAATCGCT ATTTCACATG ACCTGTACAT GTTTTGTGGC TTGTTGATAT CACTGTTGCT AACGAACAAG TGGCTCTGCA GGATGGGCTC CCTAACATTC AAGGCTCCAG ACCGGGCGAA GTACCCAGCA ATGGATATTT CATATGCTGC TGGTCGGGCA GGTGGGACCA TGACTGGGGT CCTCAGTGCA GCGAACGAGA AAGCTGTCGA GCTATTTTTG GACGAGAGGT AGACGACGTT TGTCCGAAGA CCATCAGAGC ATTAAGTGTT GCTTACTTCG CCTCTCTTGT TAGTAGGTTG GTCTGTCCCG AATGTTCTGT TTCGGTTGGT GTGAAGCTTA TGGATGAGGA AATGTTTGGT GCAGAATTGG CTACTTGGAC ATCATCAAAG TCATTGAAAG TACCTGCGAC AAGCACAGGC AAGAGTTGGT GTTGCGTCCT TCACTTGAAG AGATTATTCA CTACGATCAA TGGGCACGTG TTTTTGCTGA GGATGTGGCT AAGAAGTACG AAATCTCTCC TTCGGCCACG CCTGTGCCAG TTTAAACTTC TGTATGCATG ATACAAACCT CCTCACTTAC TTAATTGTAA CACTATATGA CACCACCGAC GGACGTGCTT TGGAGCGAAA AAGGTCGTAC ATATGCGAGA CACGTAGTGT AATCATCATC TTATGTAGTT GTGTAGTCGG ATGACCACAG ATAGGACAGT TTCCTCTGCC TGGGCAGAGA GCGTCAGCAG ATTTTTGTTG ATAGACTTCG GAATCACGGA ATAAACCTTT AGTTCCATCC TTGTAGAAAA CACCAGTTAA CGGAGTCAAG AAACCGGAAG CGGGCAAATC AAAAAATATC AATTGCACGT CTTTCTTTTT TGAGCTTTGA ACGACGTGGA AAGGTAATCA CCGCGAGACA TCCGTTCTCG CTATAGACTG ACATCATTCA TTGGATAAAA ATGTTCCATC AAATTTTATC TCTGTAGCGG TTGATTGCC |
mRNA UTR + CDS |
| >Mp6g04420.1 GACTGGATGT CGCAGGCGCA ACGACGCAGC AGCGCTCGTC GCAGCAGCAG CGCTCGTGCC TTGCTTTCCG AGAGTCCCTG CAGCAGACCA ACTCCGCGTC GGGGTCGGAG CAGCTGGAGC TGGAGCAGGA GGAGGAGGAG CAGGAGCAGG AGCGCGTGGG AGTCTTGCTT GATTGCTTGG GGGTCGCGGT GCCAGCGGAC GGAGTCGCGG ATTGTTGTTG CAGGATAGGC GGCGCGATTG GAGAGTGCTA GTTGGAGGTG TGCGGCATTT GGGTCCCATG GTGTGGGAGA GATAGCGCGG ACACTTGCGC AGGAGCTGTG TCATTGTGCT CGTGGTGTCG ATTGGAGTCG AGGTGTGCTC TGTGCAGCGT GGTTGTGTTT TGGAGAATTC GTCGGAATGG GTCTCGAGGC CGCTGCTATG GCGGGCATTT CGCCCGCTTC TTCTCTTCTG CCTTCTGCTC GGCGAAGCGC GACCGAGCTT AGTCTGAGGG CGTCGGATAT GCCATCCTTT TCCGGTACCA AGTTAGCAGG CGCTTGCACG TGGGGAAAAT CGTCGAGAGT CTCCACTGCT GGCAAAGGCG TGCAGTGTTC TTCCAATGGA CCTCCTCCTG CTTGGCCTGG AAGAGCTGTA GACGACGGAG TGAAAAAAAA TTATACTGGA CCCAAACCCA TCTCTCTCAT TGGGTCTACC GGGTCTATTG GTACCCAGAC TCTGGACATC GTTCGTGAGA ACCCTGATAA ATTCAGGGTG GTCGCACTAG CCGCTGGTTC CAATATTACT CTGCTAGCTG ATCAGGTGAG GACGTTCAAA CCCAGTTTGG TTTGTGTGCG TCATGGAGAC CGAGTTGCCG AGCTGAAGGA AGCTATTGCC GATGTTTACC CTCAGCCCGA GATCGTGGTC GGTGACTCTG GGATTGTAGA GGTTGCCCAA CATCCCGAAG CCGTCACAGT GGTCACTGGA ATCGTCGGCT GTGCTGGTCT GAAGCCCACT GTTGCAGCTA TCGAAGCAGG AAAAGACATA GCTTTAGCAA ATAAGGAAAC TTTGATCGCC GGAGGTCCTT ATGTACTACC CCTTGCCAAG AAATATGGCA GCAAAATTTT GCCTGCCGAT TCCGAGCATT CAGCTATTTT TCAGTGTATT CAAGGTTTGC CAGAAGGTGG ACTGAGACGC ATCATCCTCA CAGCATCTGG GGGTGCCTTT AGGGATTGGC CTGTGGAGAA ATTGAAAGAC GTCAAGGTGG CCGATGCTCT GAAACATCCA AACTGGAGCA TGGGCAGGAA AATCACTGTT GACTCAGCCA CTCTGATGAA TAAGGGTTTG GAAGTTATTG AGGCTCACTA CCTCTTCGGA GCTGAGTACG ATGACATCGA GATAGTCATC CATCCGCAAT CGATCGTCCA TTCCATGGTC GAAACACAGG ATTCTTCTGT CCTTGGCCAG ATGGGATGGC CAGATATGAG GTTACCTATT CTTTATACCT TGTCATGGCC TGAACGTGTT TCTTGCTCGG AGAGCACTTG GCCCCGCCTT GATTTCGTGA AGATGGGCTC CCTAACATTC AAGGCTCCAG ACCGGGCGAA GTACCCAGCA ATGGATATTT CATATGCTGC TGGTCGGGCA GGTGGGACCA TGACTGGGGT CCTCAGTGCA GCGAACGAGA AAGCTGTCGA GCTATTTTTG GACGAGAGAA TTGGCTACTT GGACATCATC AAAGTCATTG AAAGTACCTG CGACAAGCAC AGGCAAGAGT TGGTGTTGCG TCCTTCACTT GAAGAGATTA TTCACTACGA TCAATGGGCA CGTGTTTTTG CTGAGGATGT GGCTAAGAAG TACGAAATCT CTCCTTCGGC CACGCCTGTG CCAGTTTAAA CTTCTGTATG CATGATACAA ACCTCCTCAC TTACTTAATT GTAACACTAT ATGACACCAC CGACGGACGT GCTTTGGAGC GAAAAAGGTC GTACATATGC GAGACACGTA GTGTAATCAT CATCTTATGT AGTTGTGTAG TCGGATGACC ACAGATAGGA CAGTTTCCTC TGCCTGGGCA GAGAGCGTCA GCAGATTTTT GTTGATAGAC TTCGGAATCA CGGAATAAAC CTTTAGTTCC ATCCTTGTAG AAAACACCAG TTAACGGAGT CAAGAAACCG GAAGCGGGCA AATCAAAAAA TATCAATTGC ACGTCTTTCT TTTTTGAGCT TTGAACGACG TGGAAAGGTA ATCACCGCGA GACATCCGTT CTCGCTATAG ACTGACATCA TTCATTGGAT AAAAATGTTC CATCAAATTT TATCTCTGTA GCGGTTGATT GCC |
CDS |
| >Mp6g04420.1 ATGGGTCTCG AGGCCGCTGC TATGGCGGGC ATTTCGCCCG CTTCTTCTCT TCTGCCTTCT GCTCGGCGAA GCGCGACCGA GCTTAGTCTG AGGGCGTCGG ATATGCCATC CTTTTCCGGT ACCAAGTTAG CAGGCGCTTG CACGTGGGGA AAATCGTCGA GAGTCTCCAC TGCTGGCAAA GGCGTGCAGT GTTCTTCCAA TGGACCTCCT CCTGCTTGGC CTGGAAGAGC TGTAGACGAC GGAGTGAAAA AAAATTATAC TGGACCCAAA CCCATCTCTC TCATTGGGTC TACCGGGTCT ATTGGTACCC AGACTCTGGA CATCGTTCGT GAGAACCCTG ATAAATTCAG GGTGGTCGCA CTAGCCGCTG GTTCCAATAT TACTCTGCTA GCTGATCAGG TGAGGACGTT CAAACCCAGT TTGGTTTGTG TGCGTCATGG AGACCGAGTT GCCGAGCTGA AGGAAGCTAT TGCCGATGTT TACCCTCAGC CCGAGATCGT GGTCGGTGAC TCTGGGATTG TAGAGGTTGC CCAACATCCC GAAGCCGTCA CAGTGGTCAC TGGAATCGTC GGCTGTGCTG GTCTGAAGCC CACTGTTGCA GCTATCGAAG CAGGAAAAGA CATAGCTTTA GCAAATAAGG AAACTTTGAT CGCCGGAGGT CCTTATGTAC TACCCCTTGC CAAGAAATAT GGCAGCAAAA TTTTGCCTGC CGATTCCGAG CATTCAGCTA TTTTTCAGTG TATTCAAGGT TTGCCAGAAG GTGGACTGAG ACGCATCATC CTCACAGCAT CTGGGGGTGC CTTTAGGGAT TGGCCTGTGG AGAAATTGAA AGACGTCAAG GTGGCCGATG CTCTGAAACA TCCAAACTGG AGCATGGGCA GGAAAATCAC TGTTGACTCA GCCACTCTGA TGAATAAGGG TTTGGAAGTT ATTGAGGCTC ACTACCTCTT CGGAGCTGAG TACGATGACA TCGAGATAGT CATCCATCCG CAATCGATCG TCCATTCCAT GGTCGAAACA CAGGATTCTT CTGTCCTTGG CCAGATGGGA TGGCCAGATA TGAGGTTACC TATTCTTTAT ACCTTGTCAT GGCCTGAACG TGTTTCTTGC TCGGAGAGCA CTTGGCCCCG CCTTGATTTC GTGAAGATGG GCTCCCTAAC ATTCAAGGCT CCAGACCGGG CGAAGTACCC AGCAATGGAT ATTTCATATG CTGCTGGTCG GGCAGGTGGG ACCATGACTG GGGTCCTCAG TGCAGCGAAC GAGAAAGCTG TCGAGCTATT TTTGGACGAG AGAATTGGCT ACTTGGACAT CATCAAAGTC ATTGAAAGTA CCTGCGACAA GCACAGGCAA GAGTTGGTGT TGCGTCCTTC ACTTGAAGAG ATTATTCACT ACGATCAATG GGCACGTGTT TTTGCTGAGG ATGTGGCTAA GAAGTACGAA ATCTCTCCTT CGGCCACGCC TGTGCCAGTT TAA |
Protein |
| >Mp6g04420.1 MGLEAAAMAG ISPASSLLPS ARRSATELSL RASDMPSFSG TKLAGACTWG KSSRVSTAGK GVQCSSNGPP PAWPGRAVDD GVKKNYTGPK PISLIGSTGS IGTQTLDIVR ENPDKFRVVA LAAGSNITLL ADQVRTFKPS LVCVRHGDRV AELKEAIADV YPQPEIVVGD SGIVEVAQHP EAVTVVTGIV GCAGLKPTVA AIEAGKDIAL ANKETLIAGG PYVLPLAKKY GSKILPADSE HSAIFQCIQG LPEGGLRRII LTASGGAFRD WPVEKLKDVK VADALKHPNW SMGRKITVDS ATLMNKGLEV IEAHYLFGAE YDDIEIVIHP QSIVHSMVET QDSSVLGQMG WPDMRLPILY TLSWPERVSC SESTWPRLDF VKMGSLTFKA PDRAKYPAMD ISYAAGRAGG TMTGVLSAAN EKAVELFLDE RIGYLDIIKV IESTCDKHRQ ELVLRPSLEE IIHYDQWARV FAEDVAKKYE ISPSATPVPV |