Mp6g04430



Description

Annotation

Database ID Description
ProSiteProfiles PS50157 Zinc finger C2H2 type domain profile.
PANTHER PTHR31681 C2H2-LIKE ZINC FINGER PROTEIN
SMART SM00355 c2h2final6
Pfam PF00644 Poly(ADP-ribose) polymerase catalytic domain
Gene3D G3DSA:6.20.320.10 -
SUPERFAMILY SSF57667 beta-beta-alpha zinc fingers
SUPERFAMILY SSF56399 ADP-ribosylation
ProSitePatterns PS00028 Zinc finger C2H2 type domain signature.
Gene3D G3DSA:3.90.228.10 -
Gene3D G3DSA:3.30.160.60 Classic Zinc Finger
KOG KOG3623 Homeobox transcription factor SIP1; N-term missing; C-term missing; [K]
MapolyID Mapoly0034s0076 -
GO GO:0003950 NAD+-protein poly-ADP-ribosyltransferase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpC2H2-23 transcription factor, C2H2-ZnF Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp6g04430.1 chr6:5487251..5497080 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp6g04430 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp6g04430 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.