Mp6g04480
Description
Annotation
| Database | ID | Description |
|---|---|---|
| PANTHER | PTHR48140 | FATTY ACID DESATURASE 4, CHLOROPLASTIC-RELATED |
| Pfam | PF10520 | Lipid desaturase domain |
| KEGG | K20417 | palmitoyl-[glycerolipid] 3-(E)-desaturase [EC:1.14.19.43] |
| KOG | KOG3011 | Ubiquitin-conjugating enzyme; N-term missing; [O] |
| MapolyID | Mapoly0034s0071 | - |
Nomenclature
No gene symbols are registered for this gene.
Associated Literature (AI-based literature mining, Beta-version)
UVB-induced DEG, fatty acid desaturase (annotation).
0 core 2 peripheral
Clayton, W. A., et al. (2018)
· Plant Journal research experimental background
UVB-induced DEG, fatty acid desaturase (annotation).
Jibran, R., et al. (2024b)
· Frontiers in Plant Science research experimental background
Palmitoyl glycerolipid gene; DEG.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp6g04480 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp6g04480.1 ATGGGTCTCA GCGACACGAG CCTCGAGTCC ACCATGGAGC ACAGGTTGTG GGTCGGGGCA GGAGCGGCGT CCGTGATGGG ACTGCTCGCG AAAGCGGTGA CGGCGTCTCA CAGCCCCGAG GACGCAGCTG TAATTTGCGT CTCAGCTCTG GCAGCTTATT CGCTCTCGGA CCTGGGAACG GGAGTGTACC ACTGGGGCGT CGACAACTAC GGGGACGCCA AGACTCCCGT CTTCGGCTCT CAGATCGACG CATTTCAAGG CCACCACAAG CGCCCTTGGA CTATCACCAA AAGGCAGTTC GCCAACAACA TTCATGCCAT TGCACGGCCC GTCGCACTCT TTCTCGCTCC CTTCTTGGCT CTCCCCAGCA ATCCGGCTTT GGACACATTT TTGGGATTGT TTCTCGGATT TGTGGTCATG AGCCAGCAAT TCCACGCTTG GTCTCACATG AAGAAAAGTC AGCTGCCCCC ATTAGTTATA GCTTTACAGG ATAGAGGAAT TCTCGTGTCG AGGAAAATGC ACGGCGCTCA CCACCGATCT CCGTATGACA TCAATTATTG CATTGTCAGT GGCTTGTGGA ACCCTTTTCT CGACAAGAAT CGGATTTTCC CGAGCCTAGA AGCGTTCATT CATTCCAATT ATGGAGTTGC TCCGAGGTCA TGGGCCGAGA CTCAACCTGA GTGGTTGCAG GAAGGTTCAT ATTTCGAAGA TGGTTCCGAG ATCAATCTGG AACAGCAGCA ACAACAATGA |
mRNA UTR + CDS |
| >Mp6g04480.1 ATGGGTCTCA GCGACACGAG CCTCGAGTCC ACCATGGAGC ACAGGTTGTG GGTCGGGGCA GGAGCGGCGT CCGTGATGGG ACTGCTCGCG AAAGCGGTGA CGGCGTCTCA CAGCCCCGAG GACGCAGCTG TAATTTGCGT CTCAGCTCTG GCAGCTTATT CGCTCTCGGA CCTGGGAACG GGAGTGTACC ACTGGGGCGT CGACAACTAC GGGGACGCCA AGACTCCCGT CTTCGGCTCT CAGATCGACG CATTTCAAGG CCACCACAAG CGCCCTTGGA CTATCACCAA AAGGCAGTTC GCCAACAACA TTCATGCCAT TGCACGGCCC GTCGCACTCT TTCTCGCTCC CTTCTTGGCT CTCCCCAGCA ATCCGGCTTT GGACACATTT TTGGGATTGT TTCTCGGATT TGTGGTCATG AGCCAGCAAT TCCACGCTTG GTCTCACATG AAGAAAAGTC AGCTGCCCCC ATTAGTTATA GCTTTACAGG ATAGAGGAAT TCTCGTGTCG AGGAAAATGC ACGGCGCTCA CCACCGATCT CCGTATGACA TCAATTATTG CATTGTCAGT GGCTTGTGGA ACCCTTTTCT CGACAAGAAT CGGATTTTCC CGAGCCTAGA AGCGTTCATT CATTCCAATT ATGGAGTTGC TCCGAGGTCA TGGGCCGAGA CTCAACCTGA GTGGTTGCAG GAAGGTTCAT ATTTCGAAGA TGGTTCCGAG ATCAATCTGG AACAGCAGCA ACAACAATGA |
CDS |
| >Mp6g04480.1 ATGGGTCTCA GCGACACGAG CCTCGAGTCC ACCATGGAGC ACAGGTTGTG GGTCGGGGCA GGAGCGGCGT CCGTGATGGG ACTGCTCGCG AAAGCGGTGA CGGCGTCTCA CAGCCCCGAG GACGCAGCTG TAATTTGCGT CTCAGCTCTG GCAGCTTATT CGCTCTCGGA CCTGGGAACG GGAGTGTACC ACTGGGGCGT CGACAACTAC GGGGACGCCA AGACTCCCGT CTTCGGCTCT CAGATCGACG CATTTCAAGG CCACCACAAG CGCCCTTGGA CTATCACCAA AAGGCAGTTC GCCAACAACA TTCATGCCAT TGCACGGCCC GTCGCACTCT TTCTCGCTCC CTTCTTGGCT CTCCCCAGCA ATCCGGCTTT GGACACATTT TTGGGATTGT TTCTCGGATT TGTGGTCATG AGCCAGCAAT TCCACGCTTG GTCTCACATG AAGAAAAGTC AGCTGCCCCC ATTAGTTATA GCTTTACAGG ATAGAGGAAT TCTCGTGTCG AGGAAAATGC ACGGCGCTCA CCACCGATCT CCGTATGACA TCAATTATTG CATTGTCAGT GGCTTGTGGA ACCCTTTTCT CGACAAGAAT CGGATTTTCC CGAGCCTAGA AGCGTTCATT CATTCCAATT ATGGAGTTGC TCCGAGGTCA TGGGCCGAGA CTCAACCTGA GTGGTTGCAG GAAGGTTCAT ATTTCGAAGA TGGTTCCGAG ATCAATCTGG AACAGCAGCA ACAACAATGA |
Protein |
| >Mp6g04480.1 MGLSDTSLES TMEHRLWVGA GAASVMGLLA KAVTASHSPE DAAVICVSAL AAYSLSDLGT GVYHWGVDNY GDAKTPVFGS QIDAFQGHHK RPWTITKRQF ANNIHAIARP VALFLAPFLA LPSNPALDTF LGLFLGFVVM SQQFHAWSHM KKSQLPPLVI ALQDRGILVS RKMHGAHHRS PYDINYCIVS GLWNPFLDKN RIFPSLEAFI HSNYGVAPRS WAETQPEWLQ EGSYFEDGSE INLEQQQQQ |