Mp6g04650



Description

Annotation

Database ID Description
Gene3D G3DSA:4.10.280.10 -
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF47459 HLH, helix-loop-helix DNA-binding domain
CDD cd11452 bHLH_AtNAI1_like
ProSiteProfiles PS50888 Myc-type, basic helix-loop-helix (bHLH) domain profile.
Pfam PF00010 Helix-loop-helix DNA-binding domain
SMART SM00353 finulus
PANTHER PTHR45959 BHLH TRANSCRIPTION FACTOR
KOG KOG1319 bHLHZip transcription factor BIGMAX; N-term missing; C-term missing; [K]
MapolyID Mapoly0034s0053 -
GO GO:0046983 protein dimerization activity

Nomenclature

Gene symbol Product Transcript ID Status
MpBHLH32 transcription factor, bHLH Published

Transcript models

Transcript ID Location Sequences Extract region
Mp6g04650.1 chr6:5843659..5849243 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp6g04650 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp6g04650 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.