Mp6g05290
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:1.10.890.20 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| PANTHER | PTHR28039 | CHALCONE--FLAVONONE ISOMERASE 1-RELATED |
| SUPERFAMILY | SSF54626 | Chalcone isomerase |
| Pfam | PF02431 | Chalcone-flavanone isomerase |
| Gene3D | G3DSA:3.50.70.10 | - |
| KEGG | K01859 | chalcone isomerase [EC:5.5.1.6] |
| MapolyID | Mapoly0167s0012 | - |
| GO | GO:0016872 | intramolecular lyase activity |
| GO | GO:0045430 | chalcone isomerase activity |
| GO | GO:0009813 | flavonoid biosynthetic process |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpCHI | Secondary metabolism enzyme | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
Chalcone isomerase (Mapoly0167s0012), second committed step of flavonoid biosynthesis. CRISPR chi mutants lacked detectable flavones and were strongly UVB-damaged, confirming flavones contribute to UVB tolerance.
2 core 3 peripheral
Zhou Y, Hamiaux C, Andre CM, Cooney JM, Schwinn KE, van Klink JW, Bowman JL, Davies KM, Albert NW. (2025)
· The New phytologist research experimental subject
Chalcone isomerase. Mpchi mutants (and Mpchi-chil double mutants) were analyzed by RNAseq in this work for comparison with Mppr10.5; CHI was among flavonoid genes downregulated in Mppr10.5.
Clayton, W. A., et al. (2018)
· Plant Journal research experimental subject
Chalcone isomerase (Mapoly0167s0012), second committed step of flavonoid biosynthesis. CRISPR chi mutants lacked detectable flavones and were strongly UVB-damaged, confirming flavones contribute to UVB tolerance.
Luo KY, Wang SP, Yang L, Luo SL, Cheng J, Dong Y, Ning Y, Wang WB. (2025)
· Frontiers in plant science research sequence comparator
M. polymorpha type II CHI gene (given as MARPO_0167s0012) placed in CHI-fold phylogenetic Group 2; structurally similar to other group members, used as the bryophyte comparator in this cross-species CHI-fold family analysis.
Berland, h., et al. (2019)
· Proceedings of the National Academy of Sciences USA research experimental comparator
Chalcone isomerase (Mapoly0167s0012); not induced, distinguishing the auronidin from anthocyanin pathway.
Albert, N. W., et al. (2018)
· New Phytologist research experimental background
Chalcone isomerase; flavonoid-pathway gene.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp6g05290 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp6g05290.1 GCGGCAAGGC GAGGCCTTGA AGTGCGCGAG GAGGAGCTGG TTATGGCGTC TTTTGCTTTT CCTGCGCTGG GTTCGTTTCG GTCGTCCGTG TGTCGGAAGG GAGGCGGCCA GGATAGCAAG TCCCTGGAGT ACATCGACCC GAGCATGCGT CGTTGTCGAG TGTAATTCTG GTGGATTAGC GGGCGACGTC AGCATTAGGC CGGGCTGTGA TTTTGCCCCG TCGTCTTATA TGCCGGAGGC CGAGAGCGAG CGAGCGAGGG AGGAAGGGAG GACGGGAGGA GAGGAGTAAA GGAGGAATGA ATGTCTGTCT CATGCGTGAA ATCCGCAATT CGCACGCTTG TCGATTTCTG TGTCGCCCCC GCTAAGCCGA GCTCCGAGTT TGAGTCCGCC TATTTCATCT TGTCCAGGCC GAAGGAAAAC CTCGATAATT CCTGTGCGTG CGTTGGTTGC CTGCGTTAGT TTTGCGAGCC AGCAGCCAGA GCAGCCAGAG CAGCCATCAG CCAGCAGCGA GGCGCGGTCA GAGCTGCAGC CCCCGCGCTT TCTTTCGCAG GTCTGCTTCT TCCGTCCAGT CTGCCACTGT CGTCCTGCTT GCTTGCGCAC ATTTTCTGTG TCAGGTCCGA GTTCCGGCTT GCATTGCTGA TTGAGTCCGA ATTGCGGCCC GCTGTCGGAA TGCTTCGTTG CCACCTCGAG GCCGGTCGCA ATGCAGCGTT CTGGAGCTCC GTCAAGTGGA CAGCATCGGC TCTTCCGGCC GATTGCTGCT CCACGATCTG CAGTTTTGCA TGTCTTGCTT TCGAGGTCCA TTACCGCAGC GCGCGAGCGT TACTCTTTGT AATTGACACA AAGGAAACAG AGGTCGTAAC GAACGAATTG TAAAGCCAGC GAGCTTGCAG GTGCACTTGG TATGTCTTCT GTAGGGGATT CCGAGATGTG AAGCTAAACC CGGGCCGATA TGACAGCAAT GCCTCACTGT CTTGCGAGTT TTCGAACACC ATCTTCACAC TTATGATTAC TTTTACCACT ATAACCTTGC AAGATGATCG ATGCTAGTAG GAACTCCAAA ATGTCGCACT GGATTCGGAC TTTTCTATGG TCGCATGGAC TCCGCTTCGA TGTTCATGAG GTATTTGGAC TCGAGCTTCG TTTGGGAAAG TAGTGACGGA GATAATGAGG GTCGCGCAGT TTACAGGTTT CCTGGCAACA ATCACTCACC ATCACCACGG GGTGGGCTGA CTGCCCGTTC AGGTCGACTG AGTAGCATTG ACTTGTTTGT GATTCGTGCT TTGCAATTAG CAACCGTGTC TCGTGAAACA TCCACCTTCT GAGCCGCGAA CTGGAATGGG TTTTTGTATT ATCGCTCAGA ACGCACAATG CACTTGAAGA GCTGAAATAC GCACTTCCTG GAGAGAGCTG GTTTCTGGTT CCAGCTGGAA CTCTCCGCGT CGAGGTTGTT CTCTGCTGTC TCAGTCCAGC TGGACTCGGC CTCGTTTGAG TCCGACCGTC TTTACTACTG CTGGCCGGAA AAGTCCGACG GTCTCTGATT GGTACCTTAG ATTTTCAGTG GAAGGAGTTA GGCAATATTT GCACGGACAT TTGTTGCCAC GTGCTTTGCT TGGTCTTCCC TGTCACAATC CGCAAACAGC TGCCAGATTG CGCGCCTTAG CTTCCACGTC CATGCAGACA CAATACAGTA CATGTCTATG CTGCCAATCA TTCGAGCTAC GAGATCTAAG ACCAAGGTAC GAGATGCAGT TTATTACCGT TGGTCCGCCT GCTTCCAGTC TTCTGACCCT TGTTTCTGGT CCCTGAATTC GTCTCACGAA TCGAAGTTTG TGAGTCCAGA CAAGCTTCAG GGTCAATACT CTCTCAGACC GATCGAAATG TGGGACTACG CCTTACAGTC TACCTAGAAA TTCCCTGACA AACGCCCTAT AATTGAGTCT CTTGTGCACC TCTTTTGGAT GTTCTTGTTC AGCGCGATTG GTTGATGTTC GACTATTCCA TCCGAGTAGT TTTGAGCACG ATCATATTGA AGCACTTTTG TTTAACATCA TCGTCCGACC TCCTTCTTGC ATGCGTGCCA GGACGGTGGA TAATACCCTT CTTCTTATGC TAACGACTGC ACATTGTGTC TTAGGGAGTG GAGGCGTCAG AAATTCTTCA ATGGAGTCTA CGCATTCGAA AGTGACTTCT CCGGCAGGGC AATCGCAGGC AGCAGAATTC CCCAAGGTGG AGAACGTTTC GGTGTCAGCC GAAGCCGAGG CCCAGGGAAA GACTCTTGCC AACGGACTGC ACCCGAAAGT AGAGAACACA GAAGTTTCTG AAGTTTCAGA AGTTACAGTA GTTGAAGGTG TGCAGGTTAC GTCGACGATT TTGGTTCCAG GTTCGGACAG TGAGCTTTCG CTCGTCGGCG CCGGTAATGC TTTCCAAACC AGTCCTACTC CTCAACCTCA CAAATCTGGC TTCTCGAACG AGAATTGAAT GTAATTACCG AAACGTTCCC AACTTGGTCA CGCGGAAAGC TAACTGTGCA GAAGATGTCG GCATCGAAGT CGTGAATCTA TTTCGATGGC CTAGCTCTCA TACTTTCTCG ACTCGTTGGC AGGTGTCAGA GGGGTCAGAC TGCCTCATGG AGTCGAACTC AAAGTGACGG TGCTAGGAAT CTACACCAAT CTTGAAGTTT TGAACCATCT CTCTAAATAC GATGGCCTCT CCGCTGAGGA GCTTCTAAAA GATGATCAAT TTCTGCTGGC TTTCCTCGAA GGTAGTAATT CTCCACCTGA AATGCTGTGC CTCGAAGTAT CTTTTATTGG ATGAATGAAG CCTAAACTCA AAATAGAAAT AGTTCATTAC GAATTTGAAG ACAACGCGTG AGGAAGTAGT TAGACCTAAT GTTATGCTGT AGTATTGATC GGGCCTTAAT TGACCTGTAA TGTCACGAAA TCCTGGAATC AGATGCGGAT GGAGAATTCG AAACGACTTC TTCAAAATTT GACTCTTCAC GGACTGACTT TTAGATGTGT ATTCGCATTG CCGTGCTCTC TAGTATCTGC TGGAGTTTGT CATAGTCTTC CGCTGGATGA GAAATTAGTA GGCTGATGGG TAGAAAGTGA AGTTGTCGTC TCCAGTTTCT AGCAATACAT GTCGAGGAAT CAACACCTTT CCTACATTAG AAAGAGTGTA CCATAATGAA GCTGGGAATC ATGACTGCGA GCAGAATCTC AGCATAGATG ATTTGACAAA TGCGCTTCTT TGTCAGTCAA GTACAAATCA ACTCGTTCTT AGATCTCATC CTTCGTCGTA GAGATAAACC GTACTGTCAC TAGTGCCTCT CAGCACGCAA ATATCTTACT TCCTTGCGCA CGTCTACAGT GACAAGTACT TGAATAGTAA CGAACAGACA TTGGCTGAGG TGAAGACGTA GAAACACCGT TCGAAACCTG TACATGTCTC TCCGAGAAGT CGAGAGTTAT ACATCTGAAA GCTGTACGTG CTATGCTTGC CGACGAACTA GAAATCTATT GTATTCTGCC TGAAAATCAA GATCCGTAAG AGAGAGGATC ATTCTCGCTA TGTGAAGATC TATTCCTCTC GTATTCAGTC CAGCCCATTT TTATCACCAA GGCCATATGT TTGAATCGAC TCACTTTTCC TCATCGATTA ATAACCAGAA CACTCCGAAC TAGGCATGTG CACTGGAACC ATAGCTTTCG TTCACTAACT CCAATTTGAT GATTTACTTG ACGACACCCG TCGTGTGTCT TTCTGTTCAC TACTGGTTAG TATCTTCAGA AGGTATAATG ATCGTCTTGT TTCTTCGTTG AATCCGTTTG AGTATCTCTA CGGGACAATT TGGCGAGGCT AGTCCATCCA GAATGGATGT GGTCTGACTC CTCGGAAAGC AACTATATCA TGTCATAGGT TTCTCCTTGA CTAGGTGGAG ATTTATACGT TGTGTGTAGG TTCTCCCCTA CTGAAGTGAT CCTCGCACTG TTGTTGAGCA TCTCTACGGG GCAATTTGAC GAAGTATGAA TGCGAACCAA AATTGATGTG GTTTGACGCA AGCATATCCT GTTACAGTTT CCTTCTATAT TAGGTGCAGA TTCACAGGGT TCATAAGTTG TGGGCAGGTC CTGTCCTACC TGCAGGTGAT CTCGGACTCA TCTCTTCATC ACAAGGTTCT TTCTCTGATC TCGAACTACC AGTTTGGAAG TAATATTTCC CCGTCCCTTC TCTGGTGTGC CATACCGCTC TTGTCGAACC TTGCATTCTG GCTGTCGACT CCTCTGGTGG TAGGTGCCTA ACCCAGATTC CTTGACGCTC CTTCTAATCT GTACTTCGCA CTCGTCTTCG ATACATGCCG TTTATATGAG ATCATTCTCT TTGGTTCATA TGAAACGACC ATACACTCAC ACTTAAGGGT TTCTTAATTG AATATACGCA GTAAGTGACG CGCGATAGCG TCGCCAAACA GAGCTTCATC TGACAGGCAA ACTCCTTATT TCATCCAATC TCATCCAGTA CCTTGAACTT TCTCAGTGTA AAGTAATGCT TTCATCTAAC CTGAATAGTT CTTACTTGAA TTTTGTTCCC CTTTTAACTA TCTCGATAGA AAGAGAGGTC TGTGCTTATC ATGCTTAAAT TCAGCTTCCT CACTGTCACT GTTTGTGCAT TTAATATACC GTCTTGCCTC CGTCATGGGT AAGTTGTCAT TTCGGAGGTT GTATTCGCCA GGACCAAATC ATCAGGAGCT ATAGCCAATC TTGCTAAAGC TGGTTCTATT CTTCTCTGTG TTTGAAAGAA AGATATTGAT ATTTTTACAC ACAACTCAAG CTTCTTTTTT TCGTAGATAT CCCAACTTTA AGTCTCTTCC AATCTTTAAA TAACATACTA TGATTCCCCA CCCTACACAT GAATGCCCGA TGTGGTGGTA GTACGGAATG TGCGTGAAAG CAGACATTGC TGTTAGCATT CCTACGACCA CGGTCTAACC CATTGTTCTT GTGTACTTCT CAGTTCGTAT TATCCGAACT TAGCGATGGA GTGACAGTAT CGCAGAAGAC AGCTGATTTC AGTGTGGAAA ATTTCACTGT CTACCTCCTC TGTGGGTACT GATAGTGAGG AAAAAATTAA ATTTATGCCA ACTGAACATT TATCCAGGAT GTTAGAATTC TTCGTCCTGC GGTGTAGATT ATGCATCTGT CTTTGCTCTC TTGTCTTTGC ACGGCACTTT GTCATCTCCT TCTTGAATTG GCTTCCAACT TCAGTGAACT TGAATCACGG ACCGTCCTTT GGTGTCTTGC AATCGAGTTT TCAAAAGCAG TCGGTTCAGT TCTAGGTACA GAGCTTCGGA CTTAGTGAAC GAGTTGGACT CAGAATCGTC TATTGAGAGC TTCAGATATA TTTTCTCACG TATCTCGAAG CGACACCTAA ACCGCTGGGC ATGGGTTCTG GTCTGGTCTG GTCTGGTCTG GTCACTTCAG TATTTTCAAG CTTAAAGAGG GTCTGGGCTG TCGTAACCGA CCTTCAGCAC GTATTCGCTC CTTTCCTCGG ACTAACGTAG TGTACATTCG ATTGTGCTAC ATGTGCAGCG CCTGTGGACA AATTAGCAAG AGTGACTATG CTACTCCCCC TCACAGGGGA GGACTATGCG GGCAAGTCGG GTGACACAAC GGAGATGAGC TTGAAGGAGG TAAATAAGTG GGGCGAAGCT GAAGAGCTGG CTTTGAAAGA ATACAGAGAG TTTTTCAAGC AGAAAACTTG TCCTCCTGGG TCCACAATCT TCTTCGCTGT AACGAAAAGT GGCCTTGAGG TGTGCAACCA ACATTCTCAA CTCATATTTT CGGTGTTCAC GTATCTGCTT TTCGACTGGT TATATGACCT TTCCCACGTT CACATCCTAT AGATGGCAAC GTGTTCCTTT GCCTTGTCCC GGAATGGAAA TGCGCGTATG TTTGGTCCTT GCTGGTGGCC GATGCCATTT TGCACCCGTA AGAACTTTCA TTTTAGTGCT GAGATCTTAG CAAAGGAATT TTCGAGCCCT TCCCGTTGAA AGACACAGTG GGTAAATCAA TAGTAAAGGT TTTGTTCTAA GTGTGCCAGC GGTATCTCAC TCTTACCCCT ACATGTCAAG TTGTAGTACT TTCTCGAAGT AGGTCGCTGT TTGCTGCAAG AAAGAACTGT GCTTGGGAAG TGAAATGTCT CATCAATGTG TCAGCATGAT TATCAATGTA TGAAGCTAAA GCATTTGATA TCATGTCACT TTGTTTCTTT ATGTGACAGA TTTCACAGTC CTTCGATTCT TCTATCCCTA AGAAAGCAGA ATATGTTGTC AAGAATCCAG TCTTCGGGGC GGGGCTTGTC GGTACCATGC TCAGCGTCAA GGGTGTGTCT CCTCACACCA GGGCTAAGTT TGGCGAAAAC ATGTCTACTT TGCTCAAGAA CAAAATCAAA GACTCCAGTG AAGTGGTGGC GAACGGGGCA TCTTAGCTGC CTCAATCCAC CTTCAACACT GTCGTCAAAT CATTTCGCAA GATGGGCAAT GTACACAATC AAGAAGATGC TCTCTCATTT ATGTGTTTTG TATGATATTG CTCTGTATAT TTAACATGTT ACGGTCATGG AGGATTCTTG TAGCTTTTAT GCAGTGTCAT GTTCGTTGCT CACAGAGCAA GGTATTGCTT TGTTGCTACG GGTGTGTCCT CGTAGCAAGG AGTAGCATTG ATACTAAATG GAGGAGAGGT GTTAATCGTC TGTTAAAAGA GAAATAAATC ATTGTATTTG GAGG |
mRNA UTR + CDS |
| >Mp6g05290.1 GCGGCAAGGC GAGGCCTTGA AGTGCGCGAG GAGGAGCTGG TTATGGCGTC TTTTGCTTTT CCTGCGCTGG GTTCGTTTCG GTCGTCCGTG TGTCGGAAGG GAGGCGGCCA GGATAGCAAG TCCCTGGAGT ACATCGACCC GAGCATGCGT CGTTGTCGAG TGTAATTCTG GTGGATTAGC GGGCGACGTC AGCATTAGGC CGGGCTGTGA TTTTGCCCCG TCGTCTTATA TGCCGGAGGC CGAGAGCGAG CGAGCGAGGG AGGAAGGGAG GACGGGAGGA GAGGAGTAAA GGAGGAATGA ATGTCTGTCT CATGCGTGAA ATCCGCAATT CGCACGCTTG TCGATTTCTG TGTCGCCCCC GCTAAGCCGA GCTCCGAGTT TGAGTCCGCC TATTTCATCT TGTCCAGGCC GAAGGAAAAC CTCGATAATT CCTGTGCGTG CGTTGGTTGC CTGCGTTAGT TTTGCGAGCC AGCAGCCAGA GCAGCCAGAG CAGCCATCAG CCAGCAGCGA GGCGCGGTCA GAGCTGCAGC CCCCGCGCTT TCTTTCGCAG GGAGTGGAGG CGTCAGAAAT TCTTCAATGG AGTCTACGCA TTCGAAAGTG ACTTCTCCGG CAGGGCAATC GCAGGCAGCA GAATTCCCCA AGGTGGAGAA CGTTTCGGTG TCAGCCGAAG CCGAGGCCCA GGGAAAGACT CTTGCCAACG GACTGCACCC GAAAGTAGAG AACACAGAAG TTTCTGAAGT TTCAGAAGTT ACAGTAGTTG AAGGTGTGCA GGTTACGTCG ACGATTTTGG TTCCAGGTTC GGACAGTGAG CTTTCGCTCG TCGGCGCCGG TGTCAGAGGG GTCAGACTGC CTCATGGAGT CGAACTCAAA GTGACGGTGC TAGGAATCTA CACCAATCTT GAAGTTTTGA ACCATCTCTC TAAATACGAT GGCCTCTCCG CTGAGGAGCT TCTAAAAGAT GATCAATTTC TGCTGGCTTT CCTCGAAGCG CCTGTGGACA AATTAGCAAG AGTGACTATG CTACTCCCCC TCACAGGGGA GGACTATGCG GGCAAGTCGG GTGACACAAC GGAGATGAGC TTGAAGGAGG TAAATAAGTG GGGCGAAGCT GAAGAGCTGG CTTTGAAAGA ATACAGAGAG TTTTTCAAGC AGAAAACTTG TCCTCCTGGG TCCACAATCT TCTTCGCTGT AACGAAAAGT GGCCTTGAGA TTTCACAGTC CTTCGATTCT TCTATCCCTA AGAAAGCAGA ATATGTTGTC AAGAATCCAG TCTTCGGGGC GGGGCTTGTC GGTACCATGC TCAGCGTCAA GGGTGTGTCT CCTCACACCA GGGCTAAGTT TGGCGAAAAC ATGTCTACTT TGCTCAAGAA CAAAATCAAA GACTCCAGTG AAGTGGTGGC GAACGGGGCA TCTTAGCTGC CTCAATCCAC CTTCAACACT GTCGTCAAAT CATTTCGCAA GATGGGCAAT GTACACAATC AAGAAGATGC TCTCTCATTT ATGTGTTTTG TATGATATTG CTCTGTATAT TTAACATGTT ACGGTCATGG AGGATTCTTG TAGCTTTTAT GCAGTGTCAT GTTCGTTGCT CACAGAGCAA GGTATTGCTT TGTTGCTACG GGTGTGTCCT CGTAGCAAGG AGTAGCATTG ATACTAAATG GAGGAGAGGT GTTAATCGTC TGTTAAAAGA GAAATAAATC ATTGTATTTG GAGG |
CDS |
| >Mp6g05290.1 ATGGAGTCTA CGCATTCGAA AGTGACTTCT CCGGCAGGGC AATCGCAGGC AGCAGAATTC CCCAAGGTGG AGAACGTTTC GGTGTCAGCC GAAGCCGAGG CCCAGGGAAA GACTCTTGCC AACGGACTGC ACCCGAAAGT AGAGAACACA GAAGTTTCTG AAGTTTCAGA AGTTACAGTA GTTGAAGGTG TGCAGGTTAC GTCGACGATT TTGGTTCCAG GTTCGGACAG TGAGCTTTCG CTCGTCGGCG CCGGTGTCAG AGGGGTCAGA CTGCCTCATG GAGTCGAACT CAAAGTGACG GTGCTAGGAA TCTACACCAA TCTTGAAGTT TTGAACCATC TCTCTAAATA CGATGGCCTC TCCGCTGAGG AGCTTCTAAA AGATGATCAA TTTCTGCTGG CTTTCCTCGA AGCGCCTGTG GACAAATTAG CAAGAGTGAC TATGCTACTC CCCCTCACAG GGGAGGACTA TGCGGGCAAG TCGGGTGACA CAACGGAGAT GAGCTTGAAG GAGGTAAATA AGTGGGGCGA AGCTGAAGAG CTGGCTTTGA AAGAATACAG AGAGTTTTTC AAGCAGAAAA CTTGTCCTCC TGGGTCCACA ATCTTCTTCG CTGTAACGAA AAGTGGCCTT GAGATTTCAC AGTCCTTCGA TTCTTCTATC CCTAAGAAAG CAGAATATGT TGTCAAGAAT CCAGTCTTCG GGGCGGGGCT TGTCGGTACC ATGCTCAGCG TCAAGGGTGT GTCTCCTCAC ACCAGGGCTA AGTTTGGCGA AAACATGTCT ACTTTGCTCA AGAACAAAAT CAAAGACTCC AGTGAAGTGG TGGCGAACGG GGCATCTTAG |
Protein |
| >Mp6g05290.1 MESTHSKVTS PAGQSQAAEF PKVENVSVSA EAEAQGKTLA NGLHPKVENT EVSEVSEVTV VEGVQVTSTI LVPGSDSELS LVGAGVRGVR LPHGVELKVT VLGIYTNLEV LNHLSKYDGL SAEELLKDDQ FLLAFLEAPV DKLARVTMLL PLTGEDYAGK SGDTTEMSLK EVNKWGEAEE LALKEYREFF KQKTCPPGST IFFAVTKSGL EISQSFDSSI PKKAEYVVKN PVFGAGLVGT MLSVKGVSPH TRAKFGENMS TLLKNKIKDS SEVVANGAS |