Mp6g05650
Description
Annotation
| Database | ID | Description |
|---|---|---|
| PANTHER | PTHR12888 | PEROXISOME ASSEMBLY PROTEIN 12 PEROXIN-12 |
| SMART | SM00184 | ring_2 |
| SUPERFAMILY | SSF57850 | RING/U-box |
| Pfam | PF04757 | Pex2 / Pex12 amino terminal region |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| CDD | cd16451 | mRING_PEX12 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) |
| PIRSF | PIRSF038074 | Peroxin-12 |
| FunFam | G3DSA:3.30.40.10:FF:000357 | Peroxisome biogenesis protein 12 |
| KEGG | K13345 | peroxin-12 |
| KOG | KOG0826 | Predicted E3 ubiquitin ligase involved in peroxisome organization; [O] |
| MapolyID | Mapoly0097s0077 | - |
| GO | GO:0016558 | protein import into peroxisome matrix |
| GO | GO:1990429 | peroxisomal importomer complex |
| GO | GO:0005515 | protein binding |
| GO | GO:0008270 | zinc ion binding |
| GO | GO:0004842 | ubiquitin-protein transferase activity |
| GO | GO:0006513 | protein monoubiquitination |
| GO | GO:0005778 | peroxisomal membrane |
| GO | GO:0005779 | obsolete integral component of peroxisomal membrane |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpPEX12 | PEX12, RING complex | Published |
Associated Literature (AI-based literature mining, Beta-version)
PEX12, RING complex; RING complex (from nomenclature)
0 core 1 peripheral
Goto-Yamada, S., et al. (2022)
· Frontiers in Cell and Developmental Biology review citation background
M. polymorpha PEX12 (peroxin/peroxisome biogenesis)
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp6g05650 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp6g05650.1 TAGAGGGTTT ACTGACGACG ATGATGAATG GAAGGGTTCC GATCGTCTCC TCCCGGTTCT CGCAGAGGGT GGATCGAATC GCTGCTCGGG AGTCGATCGA GAAATTTGTC GGCTAAGTAT CCACGTGTTC GATGGCAGCT ACGATGGTAT GTTTAATTCA TAAGAATTCT GACCAAATAG TGACTGTCAT GTTTGTACTC TCAAAGAGTT GCACTTATCT TTGGAAGAAC CACAGCGCGA ATTTCGTGCG AGAAATTCGC GCTGCGGTTC CGCGAATCTC AATCTTTCGT TCGAGGTTTC GGTAGATATA GCCTTTTAAG CCAACATTCA CAGCTTCGAC TCTCAGAATG ATAATTCGGA GGCACTCGGT CTAGATTTCT CTGGTTTGAT TTTGTGGTAG CGCACCTCTT GTTGATCCTG GGAGTGGCGC GAGTGGTGAG AGGTGGCGGA CTGTAGATTA TGTTATGTGT GCGCTGCGCA CGATAATGTC CCCGGTGCAC TTTTTTTTTA AAGTACTTAG GGTCCTACAC CGAGAGCACG GAATTCCCCT ATTGCAATTC AAAGTTTGGA TTATACGTGT TCAGTTGGCC ACTGGATTGT CTCTGAATTT TAGCTACTGA CCTTCTGTCT GGACCTGCCT TGTTAGAACC ATTTTGGGTC ACTTTTCGAG TTTTGATTGA CGGAATGTGT ACCAATAGTG GAAGTGCTGA TATATAGATT CTTACAATTT GTTAAATTCA GGCCGTAAAC TGAGGTGTAG GGCCCCATGC AACAAGCGCA GAAGCTGCTC AATTTTCAGC AAGGAGTGTG CCTATAAGAG GAGGGAAATT TAATCAGGGA GACGAAGAAG GGAGGTCAAA ATGTTGATGC AGGTCGGAGG TGAGGGCGTT CGGCCCACTT TCTTCGAAAT GGCTGCAGCC CAACATCTGC CAGCCAGCTT GCGGGCAGCC TTGTTGTATT CTTTAGGGGT AAGATGCATG AGCTTTCCCT TCTTTAATTT TTGTTCGTAG GCAAATTCAT AACAATAATC ACACCTCCCT TGTCATCGAG GCCAATACTG AAGTGGTATC TCAGTCCATA TGCGACCCGT TAGTGAGTCT CTACATTTTC TTTCTTGCTG TCCCAGTTCT CGTTCCTTAC TTGTGAGGTT TTGATTTTGG AGCAGGTTAT GGCCCAAAGA CGACCAATTC TCCACAAGGT TCTAGATTAC AGTGACGAAG CTTTTGCGGT GCTGATGCTG TTCCTTGAAG CTCACAGCCT TCGAATATCG GGTAAAGTTC AAGTTCACCT GTTACCAGTT CATCCCTGAT ACACCTGACT GATCTCGCTT TTATTCCCGT TACATTTTGC GTCTTCTTCC TTATTTCCCT GTCTTTCATG AAGTGTTTCC TGTTTCAATG AACTTTACGA ATTGTTGGCT CAATTGACCT TCTCCATAGT TTTTTGTTTC TTCAATGCGG GGGTGAGCTT GTAAATGGTT TCGTGGTTGA GACCTGGAAG CTTTGAACGT CTCTCAATTA GAGGAGGGTA TTCCATTATA GGAGAGACCT CTTCTACGCA TAACCAATGT TTCTACCTTC TCCTCTCTCT TCGTCTCAAA TTACTGTTTA TCCTCAGTCT GTTGCTTCCA GCACCGTTCA GCCAGGGCGG GTTTGTGTAT CAGTCATTCA AGGCTTGATG AAGTAATGTA ATATATTTTT CTCTGCGTAT GCAGATGCAT CGTTTGCCGA AGCGTTGTAC GGACTTCGGC GAAGATCAGC TATGCCTACT ACCGGAACTG AAATCATATC GAATAATCGT AGCAGTTCAG AACCATCTAG ACTTGGTGCC ATTTCAAGGC GTCAAAGAAG TCTGTCTGTT TTGTTTCTGG TAGTTGTCCA AAGCTTTCGA TGACCTATGT TCGTTCACCT TTTTTTGGTG TTTGCGCAGT GGCCTTTTAG CCAGTTACCT TATGTTAACA TGGACAAGTT CAGAATATTT TTTTTAAGTA TCATCACCGA AGGCATCTAT TTTGTATCAG CTAGAGAGTC GTCGTGTTTT AAGTCCGCTG TTAAATTTTA TGTGGTTTAT TCAACTCCTT GGATGCTAAA ATCCTCGTGA ACTTGAGAAT GTCTAAAAAG CGTGCGGTCA TACTTTTGAA CCAAGAACTT GGTACATGAT CACCTGCGCA GCGTATTTGA CCATCTCTTC TCCTGATTGT TACTGCCATT CAGGTCGGCA TGCCATATTT AAAGTCTAAG ATGGAGGCTG CGTATAATGC CCAGAGAGGA GGTGCGCTGC AAGCAGCATT TTGGGGCACT GGGGATGTTG ATGGGGTCGA AGTTGAGAGT ATCAATGATG ACTCTCCAAG CAATAGAGAT GAAAGACAAG GTTCGGAAGC TACAGTTACG CAGCGCATCA AAAGCAGAAT ATCGAAGCTG TGCGTCCAGA TGTATCCGTG GCTGCATGCT TCTCATGAAG GTCTGTATAT CGACTCAATT ACTGACTGTA ATGCACTGAA CTCTAGAACT TCCTCGCTGC CCCGCTTAAA GTCCCAGCGT TTTGAGAGCA GGATGGATCA GCCATATTCT GCGTACTCCT TTCTGTCCAA ATTCGGTTGT TTTCTCCAGT TGTCGTAGGC CAGCTCATGT TCCAAACTGG TATGGCCAGA GGATTCCAAT CCTGTGGAAG ACTGGTGGCT TATTAGAGAC TTTGAGGCTG AATTGCTTTC TATCTTTTAG CAATATGTAA GGAGCTGCAC ATCAATATGC TTCACTCGAG GTGAAGAATG CTTGTGTAAT GTAGGTTGTC TTATTATGCC TCGGTTCTTT TTCAGGCTTG GCATTTGCTT ATCAACTCTT GTATCTGCTG GACGCAACGC AGTTTTACAC TCCCGGCTTA CACTTGTTAG GCATTCAAGT GAGTCGAGCT TCAGGTCAAG AACTGGTAAG TGGGATCACT TGCAGCACAG CAAGCTCATG GGAAAGGGTG TATTGAACAT GCATGATCCG TGTTCCATAA TCTGTTCACA TTTGTGTCCC TTATATCCGT TGGACATTCC TTGCAGTCAT GACCTAGCGC CAGTATCAAA ATCAGCCTCT GTTAGTTCAG AAAAACCCGT CCCCGTCGTT ATGTTCATTG AGGATCGCAA GTTTCCCTTT GCCGCACGAA TACTTCACAA TCATTTTTCC CTCGCCCTTT TTGACGACCA AGTGAGCGAA GTAGTTGTCC TGTACAGCGC TCTGTAGGGC CATGATGTCC TTCTTATTCG CTGAGCATGG TGCAATATTT CCTTCGTATG TTTTATCTTT TCAGCTCCTT GATTGAAACT TAGCGCGTTG ACAATTGGTT TTCCAGATGG ATGCGTCAAA GCAAATAGTG GAGAGGAGAA ATCGGGAGTT CGAAAGGCTT AGAGGACCTC GTATACTCCA GGTGTGTCTC AGTTGACATC ATGATGCTAT GCATTGTACA TGCCACGGAT ATGAGAATAT GGCTCGTAAG AGCAGTTTTA AACGGAAATT GAGGACGATG TTGTCCAACC CTGTAATACA TCATTAGCAT TGAAGCACCT TGTCTTTGAA TTGAAATATG GGACATTTGT AATGTCTTGG TGTGTGCTCT CTATAATGCT AAGCACCCCC GCTCAGTCTT GTGTTTTTTC GTTGATTCAC AGACAGTACA GCGCGGTCTT CTTCGCACAG CCTATGGATT CCTTGATTAT GCACAGTCTG GACTCATTGC TTCCGTCTTT ATCTTCAAGG TAAAATGCGG GCCTCAACCA TGTTTCTGTT TCGTTACCTT GAGAAGAGAT CTCTTTCTCT GGACTGTAGT TTGTAAGCTC ATTTCATGGT TTTAAGCAAC CAGTTGCTAA CGTGTGAGTT GCTCAATTGC CCTATCTCAG ATGGTGGAAT GGTGGTACCA ATCAGCTGAA CAGAGATTGA CAAGCCCGAC TGTGTATCCT CCACCACCTC CGCCCCCGCC TCCAAAGGTA TCCATCTGTA ATTGTCCTAC CTCCTTTGAG AAGCATGAAC AGGTTTCTAG CTGGGGCTTA AGATTGTTGA ACACTGTTAG ATGATATGAA ATTTGAAGAG ATTTTACATT AGATGGACCG TAACTTGACA GTACCCATAA TGTTTGAGGA AGTGATATGA TTTCTGCTTT ATGTGTGATT TGAAGGTAGC CAAAGATGGC ATACCGCTAC CCGGAGATCG GACATGTTGT CCTTTATGCT TGGAGAAGAG GACCAACCCA GCTATGGTTG CAGTCTCCGG TTACGTGTTC TGTTATCCAT GTATCTACAA TTACGTTAAC GAAGTAAGTT TTCTATTCTT TTTTATCCCC TTTCATCACT GACGTTTATC TCATCTACAG AAATCATTCA GGAGACTTGA GACCTCAGCC TTGACCTATG TTTTTTCTAG TATCTCTGGT GGTAAGGTTT TTCGTCTCTT TATGCGTATA CATGCTGCAC AGGTAGAATT ATTCCGTAGA TTTTGTCGAG CACAGAAAAG AACTCCTTAA AGTGTTTGGC TGTCGTGCTC CTCGTGAAGG AAGTTTGCTG TAAAGGAATA TTCAATTCGT TTTCTCGTTT CTTCACTTGA TGTTGGACCT TTTCCTTTGT ATAGTGGACA GTGGATTACT TCCTTCCGTC GGGGCTAAAT CTAATCCCTG TAGACTAACT GTTGCTTAGA GGTTCTTGTA GGAGTCAGGC GTATCTGTTC CACTAGGACT CTTGTGTGAC TTCGTGAAAT AGCTACCCGA GAAGATTCAG TATTTACTTT CTCCCATCCG AAAAATCGGT CCTCTATGTT TGTGTTTTCT GCTGCAACCC TGACCCTTTG ATTTGAGATA AATTTGTATA GGCGTAAGAA TATCTCTCCG AGTATTGATT ACTGTGACCG CCGGTGTCGT GTACGAAGTA TTTGCACTGG CACTGCGATA TCCTTGGAAA TTTCTGAGAC AGCAAATCAC CAACACGTTC ATGTCTTGCA TCAAAGTCAA TTAAGAGTAC TCATATATAT GCCTAACAGT ACTCAGATTT TTAGTTCCAC AAGATGTAGC CTGATTACTT AGTCACATAA GATAGTCCAG GTCCAGTTAC GTAGTAATCC CGTTTGACTA TTTCTCAGTA TCTCAGGACA GTAGCATTAG TAGTTTGATT CTAGTGATGG ATAAATGTTT TGGATGATTA TTACCTCTTC GAAGCTCCAA AATCTTCTCA TTATATACTT ACTTGAACCT GTTGAACTTT TCCCGTTTGC TATTCTTTTG TGTAGTCTTC AAATTCTCGC TATGAACAGA AGCTATAAAC TGCAGATGCC TGTGGCAATG GCAGTTCCCG CTTGGGCTGT TCGCTTAGAA GTGTCCCACT GGAGGCAGTT TACCTTGTCA GACTTGTGCT GAAAGTTTTC AGTTAGTAAT CAAGACCCTC AGTTGCGAAG TCAGTTCCCC CGGAAGAACT ACGTAATGCA AGGTGGCCTC TCATATTACT GACAAGACTG CTTGGGTATT GCAGTATAAG CGTTGTCCTA TCACGTTAGC AAGCGCATCT GAAGACAAAA TACGGCGGCT CTACTACGAC GCTTGATACC TCTTAGTTTT TCCTTGATTT GGAGCTGGAT CTACGAGCAA TCAGTCCCAT GAACAACTGG GAGGGAGTCG GAGTTCCAGC GAGCATCAGT TGTACATATA CCGTAGATTT AATTCAAGAT TCGAAGTACA GTACTGCACA TTCCATTATT AGTTACCGGA GTCCAAACCG CTTAGACCTG GCTGACAACA GGGACTTGTA AAGTTCACAG GAGGTCTGTA GTTGTGCTTT GGGTGACATA TGTCCGCATA TGTCACATTC AATTTCCGAA AGGCACTCCT CTTTTTACGT TCAAATAAAG AAAAAGTGAA GATTTTTGGT C |
mRNA UTR + CDS |
| >Mp6g05650.1 TAGAGGGTTT ACTGACGACG ATGATGAATG GAAGGGTTCC GATCGTCTCC TCCCGGTTCT CGCAGAGGGT GGATCGAATC GCTGCTCGGG AGTCGATCGA GAAATTTGTC GGCTAAGTAT CCACGTGTTC GATGGCAGCT ACGATGGCCG TAAACTGAGG TGTAGGGCCC CATGCAACAA GCGCAGAAGC TGCTCAATTT TCAGCAAGGA GTGTGCCTAT AAGAGGAGGG AAATTTAATC AGGGAGACGA AGAAGGGAGG TCAAAATGTT GATGCAGGTC GGAGGTGAGG GCGTTCGGCC CACTTTCTTC GAAATGGCTG CAGCCCAACA TCTGCCAGCC AGCTTGCGGG CAGCCTTGTT GTATTCTTTA GGGGTTATGG CCCAAAGACG ACCAATTCTC CACAAGGTTC TAGATTACAG TGACGAAGCT TTTGCGGTGC TGATGCTGTT CCTTGAAGCT CACAGCCTTC GAATATCGGA TGCATCGTTT GCCGAAGCGT TGTACGGACT TCGGCGAAGA TCAGCTATGC CTACTACCGG AACTGAAATC ATATCGAATA ATCGTAGCAG TTCAGAACCA TCTAGACTTG GTGCCATTTC AAGGCGTCAA AGAAGTCTGT CTGTTTTGTT TCTGGTCGGC ATGCCATATT TAAAGTCTAA GATGGAGGCT GCGTATAATG CCCAGAGAGG AGGTGCGCTG CAAGCAGCAT TTTGGGGCAC TGGGGATGTT GATGGGGTCG AAGTTGAGAG TATCAATGAT GACTCTCCAA GCAATAGAGA TGAAAGACAA GGTTCGGAAG CTACAGTTAC GCAGCGCATC AAAAGCAGAA TATCGAAGCT GTGCGTCCAG ATGTATCCGT GGCTGCATGC TTCTCATGAA GGCTTGGCAT TTGCTTATCA ACTCTTGTAT CTGCTGGACG CAACGCAGTT TTACACTCCC GGCTTACACT TGTTAGGCAT TCAAGTGAGT CGAGCTTCAG GTCAAGAACT GATGGATGCG TCAAAGCAAA TAGTGGAGAG GAGAAATCGG GAGTTCGAAA GGCTTAGAGG ACCTCGTATA CTCCAGACAG TACAGCGCGG TCTTCTTCGC ACAGCCTATG GATTCCTTGA TTATGCACAG TCTGGACTCA TTGCTTCCGT CTTTATCTTC AAGATGGTGG AATGGTGGTA CCAATCAGCT GAACAGAGAT TGACAAGCCC GACTGTGTAT CCTCCACCAC CTCCGCCCCC GCCTCCAAAG GTAGCCAAAG ATGGCATACC GCTACCCGGA GATCGGACAT GTTGTCCTTT ATGCTTGGAG AAGAGGACCA ACCCAGCTAT GGTTGCAGTC TCCGGTTACG TGTTCTGTTA TCCATGTATC TACAATTACG TTAACGAATA TAAGCGTTGT CCTATCACGT TAGCAAGCGC ATCTGAAGAC AAAATACGGC GGCTCTACTA CGACGCTTGA TACCTCTTAG TTTTTCCTTG ATTTGGAGCT GGATCTACGA GCAATCAGTC CCATGAACAA CTGGGAGGGA GTCGGAGTTC CAGCGAGCAT CAGTTGTACA TATACCGTAG ATTTAATTCA AGATTCGAAG TACAGTACTG CACATTCCAT TATTAGTTAC CGGAGTCCAA ACCGCTTAGA CCTGGCTGAC AACAGGGACT TGTAAAGTTC ACAGGAGGTC TGTAGTTGTG CTTTGGGTGA CATATGTCCG CATATGTCAC ATTCAATTTC CGAAAGGCAC TCCTCTTTTT ACGTTCAAAT AAAGAAAAAG TGAAGATTTT TGGTC |
CDS |
| >Mp6g05650.1 ATGTTGATGC AGGTCGGAGG TGAGGGCGTT CGGCCCACTT TCTTCGAAAT GGCTGCAGCC CAACATCTGC CAGCCAGCTT GCGGGCAGCC TTGTTGTATT CTTTAGGGGT TATGGCCCAA AGACGACCAA TTCTCCACAA GGTTCTAGAT TACAGTGACG AAGCTTTTGC GGTGCTGATG CTGTTCCTTG AAGCTCACAG CCTTCGAATA TCGGATGCAT CGTTTGCCGA AGCGTTGTAC GGACTTCGGC GAAGATCAGC TATGCCTACT ACCGGAACTG AAATCATATC GAATAATCGT AGCAGTTCAG AACCATCTAG ACTTGGTGCC ATTTCAAGGC GTCAAAGAAG TCTGTCTGTT TTGTTTCTGG TCGGCATGCC ATATTTAAAG TCTAAGATGG AGGCTGCGTA TAATGCCCAG AGAGGAGGTG CGCTGCAAGC AGCATTTTGG GGCACTGGGG ATGTTGATGG GGTCGAAGTT GAGAGTATCA ATGATGACTC TCCAAGCAAT AGAGATGAAA GACAAGGTTC GGAAGCTACA GTTACGCAGC GCATCAAAAG CAGAATATCG AAGCTGTGCG TCCAGATGTA TCCGTGGCTG CATGCTTCTC ATGAAGGCTT GGCATTTGCT TATCAACTCT TGTATCTGCT GGACGCAACG CAGTTTTACA CTCCCGGCTT ACACTTGTTA GGCATTCAAG TGAGTCGAGC TTCAGGTCAA GAACTGATGG ATGCGTCAAA GCAAATAGTG GAGAGGAGAA ATCGGGAGTT CGAAAGGCTT AGAGGACCTC GTATACTCCA GACAGTACAG CGCGGTCTTC TTCGCACAGC CTATGGATTC CTTGATTATG CACAGTCTGG ACTCATTGCT TCCGTCTTTA TCTTCAAGAT GGTGGAATGG TGGTACCAAT CAGCTGAACA GAGATTGACA AGCCCGACTG TGTATCCTCC ACCACCTCCG CCCCCGCCTC CAAAGGTAGC CAAAGATGGC ATACCGCTAC CCGGAGATCG GACATGTTGT CCTTTATGCT TGGAGAAGAG GACCAACCCA GCTATGGTTG CAGTCTCCGG TTACGTGTTC TGTTATCCAT GTATCTACAA TTACGTTAAC GAATATAAGC GTTGTCCTAT CACGTTAGCA AGCGCATCTG AAGACAAAAT ACGGCGGCTC TACTACGACG CTTGA |
Protein |
| >Mp6g05650.1 MLMQVGGEGV RPTFFEMAAA QHLPASLRAA LLYSLGVMAQ RRPILHKVLD YSDEAFAVLM LFLEAHSLRI SDASFAEALY GLRRRSAMPT TGTEIISNNR SSSEPSRLGA ISRRQRSLSV LFLVGMPYLK SKMEAAYNAQ RGGALQAAFW GTGDVDGVEV ESINDDSPSN RDERQGSEAT VTQRIKSRIS KLCVQMYPWL HASHEGLAFA YQLLYLLDAT QFYTPGLHLL GIQVSRASGQ ELMDASKQIV ERRNREFERL RGPRILQTVQ RGLLRTAYGF LDYAQSGLIA SVFIFKMVEW WYQSAEQRLT SPTVYPPPPP PPPPKVAKDG IPLPGDRTCC PLCLEKRTNP AMVAVSGYVF CYPCIYNYVN EYKRCPITLA SASEDKIRRL YYDA |