Mp6g06650



Description

Annotation

Database ID Description
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF09262 Peroxisome biogenesis factor 1, N-terminal
SUPERFAMILY SSF50692 ADC-like
Gene3D G3DSA:1.10.8.60 -
ProSitePatterns PS00674 AAA-protein family signature.
SUPERFAMILY SSF54585 Cdc48 domain 2-like
Pfam PF00004 ATPase family associated with various cellular activities (AAA)
Pfam PF17862 AAA+ lid domain
Gene3D G3DSA:3.10.330.10 -
SMART SM00382 AAA_5
FunFam G3DSA:3.40.50.300:FF:000149 Nuclear valosin-containing protein-like
Gene3D G3DSA:3.40.50.300 -
PANTHER PTHR23077 AAA-FAMILY ATPASE
KEGG K13338 peroxin-1
KOG KOG0735 AAA+-type ATPase; [O]
MapolyID Mapoly0173s0010 -
GO GO:0007031 peroxisome organization
GO GO:0016558 protein import into peroxisome matrix
GO GO:0005524 ATP binding
GO GO:0016887 ATP hydrolysis activity
GO GO:0005778 peroxisomal membrane
GO GO:0005777 peroxisome
GO GO:0005829 cytosol

Nomenclature

Gene symbol Product Transcript ID Status
MpPEX1 PEX1, AAA ATPase motor complex Published

Associated Literature (AI-based literature mining, Beta-version)

PEX1, AAA ATPase motor complex; AAA ATPase motor complex (from nomenclature)

0 core 1 peripheral

Goto-Yamada, S., et al. (2022) · Frontiers in Cell and Developmental Biology  review citation background
M. polymorpha PEX1 (peroxin/peroxisome biogenesis)

Transcript models

Transcript ID Location Sequences Extract region
Mp6g06650.1 chr6:8721948..8732470 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp6g06650 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp6g06650 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.