Mp6g07220



Description

Annotation

Database ID Description
PANTHER PTHR44378 ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED
ProSitePatterns PS00455 Putative AMP-binding domain signature.
SUPERFAMILY SSF56801 Acetyl-CoA synthetase-like
Gene3D G3DSA:3.30.300.30 -
Pfam PF00501 AMP-binding enzyme
Gene3D G3DSA:3.40.50.12780 -
KOG KOG1175 Acyl-CoA synthetase; [I]
MapolyID Mapoly0053s0036 -

Nomenclature

Gene symbol Product Transcript ID Status
MpACOS20 Acyl-CoA synthase, Secondary metabolism enzyme Provisional
This is a provisional entry. If you want to update the entry, please contact the administrator.

Transcript models

Transcript ID Location Sequences Extract region
Mp6g07220.1 chr6:9498941..9506059 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp6g07220 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp6g07220 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.