Mp6g07490
Description
Annotation
| Database | ID | Description |
|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. |
| NCBIfam | TIGR00756 | pentatricopeptide repeat |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain |
| PANTHER | PTHR46782 | OS01G0757700 PROTEIN |
| Pfam | PF01535 | PPR repeat |
| KOG | KOG3941 | Intermediate in Toll signal transduction pathway (ECSIT); N-term missing; C-term missing; [T] |
| MapolyID | Mapoly0053s0063 | - |
| GO | GO:0005515 | protein binding |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpPPR_37 | Pentatricopeptide repeat proteins | Published |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp6g07490 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp6g07490.1 AAAAGGAAGT AGAAGTTGGA AGAAGGAAGG GGTGCGAGAA GTCAGCAGGT GGAAATGTGG AGTTGTGGTG AGCAGAGGGG AGGAGCATAC GGAAGCTGGC AGGGCAGCTA GCGCGAATCG CCAGGGATGC AGTTAGAAGG TGGAGTGTAG AAGGAGGGGA GGTACGAGGA GGGATATGCA AACCGTGGTT TCCCGACTCT GGCAGACTCC GTCTGTCGCC ATGTTCAGGT CGGGAGCTTT GCGGAATCTC AACAATGCTC GAACTATTTC GAATTGCCTC ATAAGAACAC ATTGTCTCTC GAAGTCAGAT TTCACAGTTT CGGCTGTTGT TCTTCGCGAG AGGAGATCGG ACCAGGATAG ATATTCGAAG TACTCGAGGT ATTTCCTCAG CTTCTGCTCG TGCCTTTTTT TTTTTTTTGG GTGACTGGTT GCCTCTGCCC ACATTTACGC TGCCGAATGG AATCAGGGTG TAGCAAAATC ACTTCGTTTC TTAGTGACTA ATTTGTTTTA TTGGTGTTTC GTAGACCGTC ACCTCTTCAC GTTGACCCTC TAGATAAATC GCAACAGCGG AAGAAGTTCG CATTTCCGGA GCAGACTCCC AGGCTTGAGG TAATTGTTAC ATTCGTGAGG AATGGATGTT CTGTCGCCTC CTGGAGTTGA TATTTTTAAT CTGGAAATGT GTGAAAAAAT TGTGGAATTC TCCCAGCTAA GTTTGATCGT GGAGCTTGGC CTGATTTCAG TTCTGTCGTT CTGAACGCCA TGGTTCAAGC TAAATCCTTT GGGTCTTGGT GTTCCCTTCT TCTGCAAGGC AGATCACTGC TGGAGGTGGT CCTCGCCCAA GAGCACCGCG ACAATGGAAG ACCAAGACCA GACGAGGCTC TATTGCTAAG TCTGTGAAGC TCATTGACAT TGTAAGTTTC ATTCGTGGCA ATTGCAGTCC AGCCGCTGCT TTGCTTTACT TGCGGTGCAG TATCTGTTGG GAGCTTGGTC TTGAATTTCA CGGAGCAAGA TGAGGGGCCA GAAATTCAAT TACGATTCGG ATATGTATGA AGGTGCACAA TCTGTCCAAC GTGAAGGAGG AAATTTATAA TACACTTGAC GCCTGGATCG CCTGGGATTT AGAGTTCCCT CTGATCGCTG TCAAGAAAGC GATAAAAGAT TTAAGTGCCA ACGGAGAGTG GAGGCGCGTT ATACAGGTAG TTCTCTCATC CATGTAGATA CCACGGAGTC GGCTCTTTCG TATGATGTAT TGTGAACCTT CCCATTGATG ACGTGCATTT GGGCATCTGA CTTCGTGGCA AGAAATAATC AGGACCATGG AAGTTGAACA AGTTCATGGT GCCCTAGTTC GGTCCAGATG CCTCTGTATC AGTAGATGGA AGTTGGCATG AAATTCTGAA GACAAACGAG TTTGCTAGTA AGGTTAGGAT ATTGCATGGT CCAATTTGAG AGCATTGAGG GCTGTACTTT GTTAGACAAT ACGTACCGCT ATGGATTCAC AGGGTAGGTG TGCGTCGATA GATTTCACTC TAGGATGCAC TCTTATGTGT TACCCATGTA TGGAGCTTGT GATCGCAGCT TACGAAATGG ATGTTAGACA AAGGTCAAGG GAAAACTTTG GCAACGTATC TTACGCTTTT AGAAGCTCTC GATCATGAGG GAAGAGTCGA CGAAGCAGAG GTTTTATGGG AGAAGGTCTT CCAGGAGAAC ATGGAGTGTA TCCCACGAAC AATGTTCTCG CGTATGATCA GCATGTACCA ACGTTATGGA AAGCCGAAGC AACTGTTGAA GGTGAGCGTC TAAACTGCAT AATATCTCAT GGGCGATCAT GATCCACTGT GAACTGAATA TCATGTTGGT CGCTTTTTTA GAGGCTACTT ATACTAAGAG GCTACTACAG GCTCTGTATA CACAAATAAT GTCGTCAGCG GGAGCTACAC AATCGTGAAA GTTTAGTGTC AACGATAAAT TTTAGTTTCA GATGCATTAT CTTACAGCTT CGGCTGCAAT TGACATGTAA TAAATGGGTT TGTGCTTCTG ATGACTTTAG ATCGATTTGT TATGATCATG TGAAGGTCTT TGCGGACATG GAAGAGTTGG GTGTAAAGCC TGATTTCGGT ACCGTGAAGA GGGTATCGAA GATATATGCC GACTTCGGAT ACCCCGAGTA CGCTCAGTCA CTGTGGAAAA AGTACCCCTT CGACTCTGAG GGCAAATTTG TCAGAAAGGA GCGTCCTTCG CGAGGTCCTG GACGAGAAGG TACATCCAAG AGCGCACATC TCACTTGATT CTTCGTTAGC TTGATCCGGC ACATTGCTTC ACAACCGCCT TGCCTGTGGT TTTCTCGCAT GCTCTTTCCT CAGGACCAGC ATTGCGTGTA GACCCCATGA ACTCCTGTAT TTCAAAAGTT AGGATTTATA GAAACTCTTT CAAAGAAAGA TAATATCATA GATCCAGTTT CATGCTTCTT CTACATAATC CTGACTCCCC TCTCTGTTAC ACGCAAATCC AGAAATAATC AAAACTCCAT CGAGGCAAGG AACGAAGAAG TCAGATGGTA TCAAAGTCGG GGATAATGTT GCATGACCAC CTATGAAGCG AACGTTGAAA TGAGCGAGAT GATGCTCAAG TGTGGTGAAT GAAGCAGTAG CAACTGATAT ATACATCAGT TGATCAAGAT CTAACTATCT CTCAGCTTCT AGCTGAGAAG GATTACAGTT CCACCATTCA TCAGATGCTT CACAGTCTAG TTTACCGGGC AGTACAGAGC TTTTGATTTT CGGGATTCAA AACACCTGTT GCCCATTGCC CTTGTAACGA AGCTACATGT ACATAACTTG AGAGAATTTT ATTAAGGTTA CACGCCGGAT GTAAATGATA TGAGTAATGA GTGATATTGA TTTCATGGAA AACCTTTGCC TCATCAGTAC TTAAAAATGG TGCTGCTCGG AGAAATAAAT ACTCCAAGTC AAGCACAATC CCTCCTACCT CGGAATCAAC CGCACG |
mRNA UTR + CDS |
| >Mp6g07490.1 AAAAGGAAGT AGAAGTTGGA AGAAGGAAGG GGTGCGAGAA GTCAGCAGGT GGAAATGTGG AGTTGTGGTG AGCAGAGGGG AGGAGCATAC GGAAGCTGGC AGGGCAGCTA GCGCGAATCG CCAGGGATGC AGTTAGAAGG TGGAGTGTAG AAGGAGGGGA GGTACGAGGA GGGATATGCA AACCGTGGTT TCCCGACTCT GGCAGACTCC GTCTGTCGCC ATGTTCAGGT CGGGAGCTTT GCGGAATCTC AACAATGCTC GAACTATTTC GAATTGCCTC ATAAGAACAC ATTGTCTCTC GAAGTCAGAT TTCACAGTTT CGGCTGTTGT TCTTCGCGAG AGGAGATCGG ACCAGGATAG ATATTCGAAG TACTCGAGAC CGTCACCTCT TCACGTTGAC CCTCTAGATA AATCGCAACA GCGGAAGAAG TTCGCATTTC CGGAGCAGAC TCCCAGGCTT GAGATCACTG CTGGAGGTGG TCCTCGCCCA AGAGCACCGC GACAATGGAA GACCAAGACC AGACGAGGCT CTATTGCTAA GTCTGTGAAG CTCATTGACA TTGTGCACAA TCTGTCCAAC GTGAAGGAGG AAATTTATAA TACACTTGAC GCCTGGATCG CCTGGGATTT AGAGTTCCCT CTGATCGCTG TCAAGAAAGC GATAAAAGAT TTAAGTGCCA ACGGAGAGTG GAGGCGCGTT ATACAGCTTA CGAAATGGAT GTTAGACAAA GGTCAAGGGA AAACTTTGGC AACGTATCTT ACGCTTTTAG AAGCTCTCGA TCATGAGGGA AGAGTCGACG AAGCAGAGGT TTTATGGGAG AAGGTCTTCC AGGAGAACAT GGAGTGTATC CCACGAACAA TGTTCTCGCG TATGATCAGC ATGTACCAAC GTTATGGAAA GCCGAAGCAA CTGTTGAAGG TCTTTGCGGA CATGGAAGAG TTGGGTGTAA AGCCTGATTT CGGTACCGTG AAGAGGGTAT CGAAGATATA TGCCGACTTC GGATACCCCG AGTACGCTCA GTCACTGTGG AAAAAGTACC CCTTCGACTC TGAGGGCAAA TTTGTCAGAA AGGAGCGTCC TTCGCGAGGT CCTGGACGAG AAGAAATAAT CAAAACTCCA TCGAGGCAAG GAACGAAGAA GTCAGATGGT ATCAAAGTCG GGGATAATGT TGCATGACCA CCTATGAAGC GAACGTTGAA ATGAGCGAGA TGATGCTCAA GTGTGGTGAA TGAAGCAGTA GCAACTGATA TATACATCAG TTGATCAAGA TCTAACTATC TCTCAGCTTC TAGCTGAGAA GGATTACAGT TCCACCATTC ATCAGATGCT TCACAGTCTA GTTTACCGGG CAGTACAGAG CTTTTGATTT TCGGGATTCA AAACACCTGT TGCCCATTGC CCTTGTAACG AAGCTACATG TACATAACTT GAGAGAATTT TATTAAGGTT ACACGCCGGA TGTAAATGAT ATGAGTAATG AGTGATATTG ATTTCATGGA AAACCTTTGC CTCATCAGTA CTTAAAAATG GTGCTGCTCG GAGAAATAAA TACTCCAAGT CAAGCACAAT CCCTCCTACC TCGGAATCAA CCGCACG |
CDS |
| >Mp6g07490.1 ATGCAAACCG TGGTTTCCCG ACTCTGGCAG ACTCCGTCTG TCGCCATGTT CAGGTCGGGA GCTTTGCGGA ATCTCAACAA TGCTCGAACT ATTTCGAATT GCCTCATAAG AACACATTGT CTCTCGAAGT CAGATTTCAC AGTTTCGGCT GTTGTTCTTC GCGAGAGGAG ATCGGACCAG GATAGATATT CGAAGTACTC GAGACCGTCA CCTCTTCACG TTGACCCTCT AGATAAATCG CAACAGCGGA AGAAGTTCGC ATTTCCGGAG CAGACTCCCA GGCTTGAGAT CACTGCTGGA GGTGGTCCTC GCCCAAGAGC ACCGCGACAA TGGAAGACCA AGACCAGACG AGGCTCTATT GCTAAGTCTG TGAAGCTCAT TGACATTGTG CACAATCTGT CCAACGTGAA GGAGGAAATT TATAATACAC TTGACGCCTG GATCGCCTGG GATTTAGAGT TCCCTCTGAT CGCTGTCAAG AAAGCGATAA AAGATTTAAG TGCCAACGGA GAGTGGAGGC GCGTTATACA GCTTACGAAA TGGATGTTAG ACAAAGGTCA AGGGAAAACT TTGGCAACGT ATCTTACGCT TTTAGAAGCT CTCGATCATG AGGGAAGAGT CGACGAAGCA GAGGTTTTAT GGGAGAAGGT CTTCCAGGAG AACATGGAGT GTATCCCACG AACAATGTTC TCGCGTATGA TCAGCATGTA CCAACGTTAT GGAAAGCCGA AGCAACTGTT GAAGGTCTTT GCGGACATGG AAGAGTTGGG TGTAAAGCCT GATTTCGGTA CCGTGAAGAG GGTATCGAAG ATATATGCCG ACTTCGGATA CCCCGAGTAC GCTCAGTCAC TGTGGAAAAA GTACCCCTTC GACTCTGAGG GCAAATTTGT CAGAAAGGAG CGTCCTTCGC GAGGTCCTGG ACGAGAAGAA ATAATCAAAA CTCCATCGAG GCAAGGAACG AAGAAGTCAG ATGGTATCAA AGTCGGGGAT AATGTTGCAT GA |
Protein |
| >Mp6g07490.1 MQTVVSRLWQ TPSVAMFRSG ALRNLNNART ISNCLIRTHC LSKSDFTVSA VVLRERRSDQ DRYSKYSRPS PLHVDPLDKS QQRKKFAFPE QTPRLEITAG GGPRPRAPRQ WKTKTRRGSI AKSVKLIDIV HNLSNVKEEI YNTLDAWIAW DLEFPLIAVK KAIKDLSANG EWRRVIQLTK WMLDKGQGKT LATYLTLLEA LDHEGRVDEA EVLWEKVFQE NMECIPRTMF SRMISMYQRY GKPKQLLKVF ADMEELGVKP DFGTVKRVSK IYADFGYPEY AQSLWKKYPF DSEGKFVRKE RPSRGPGREE IIKTPSRQGT KKSDGIKVGD NVA |