Mp6g08660



Description

Annotation

Database ID Description
FunFam G3DSA:3.20.110.10:FF:000001 Alpha-mannosidase
Gene3D G3DSA:2.70.98.30 -
Pfam PF09261 Alpha mannosidase middle domain
FunFam G3DSA:2.60.40.1180:FF:000015 Alpha-mannosidase
Gene3D G3DSA:1.20.1270.50 Glycoside hydrolase family 38, central domain
Pfam PF21260 Lysosomal alpha-mannosidase-like, central domain
CDD cd10810 GH38N_AMII_LAM_like
SMART SM00872 Alpha_mann_mid_2
Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain
FunFam G3DSA:2.60.40.1360:FF:000001 Alpha-mannosidase
PANTHER PTHR11607 ALPHA-MANNOSIDASE
SUPERFAMILY SSF88688 Families 57/38 glycoside transferase middle domain
SUPERFAMILY SSF88713 Glycoside hydrolase/deacetylase
Pfam PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain
SUPERFAMILY SSF74650 Galactose mutarotase-like
Gene3D G3DSA:2.60.40.1180 -
FunFam G3DSA:1.20.1270.50:FF:000002 Alpha-mannosidase
Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain
Gene3D G3DSA:2.60.40.1360 -
Gene3D G3DSA:3.20.110.10 Glycoside hydrolase 38, N terminal domain
FunFam G3DSA:1.20.1270.50:FF:000003 Alpha-mannosidase
KEGG K01191 alpha-mannosidase [EC:3.2.1.24]
KOG KOG1959 Glycosyl hydrolase, family 38 - alpha-mannosidase; [G]
MapolyID Mapoly0060s0055 -
GO GO:0003824 catalytic activity
GO GO:0030246 carbohydrate binding
GO GO:0006013 mannose metabolic process
GO GO:0005975 carbohydrate metabolic process
GO GO:0004559 alpha-mannosidase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpGH38.2 Cell wall related protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp6g08660.1 chr6:11307453..11322040 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp6g08660 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp6g08660 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.