Mp6g11030
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Coils | Coil | Coil |
| Pfam | PF00005 | ABC transporter |
| Gene3D | G3DSA:3.40.50.300 | - |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. |
| PANTHER | PTHR43158 | SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases |
| SMART | SM00382 | AAA_5 |
| KEGG | K12608 | CCR4-NOT complex subunit CAF16 |
| KOG | KOG2355 | Predicted ABC-type transport, ATPase component/CCR4 associated factor; [RK] |
| MapolyID | Mapoly0016s0142 | - |
| GO | GO:0016887 | ATP hydrolysis activity |
| GO | GO:0005524 | ATP binding |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpABCI7 | ABC transporters | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
UVB-induced DEG, ABC-type transporter (annotation).
0 core 1 peripheral
Clayton, W. A., et al. (2018)
· Plant Journal research experimental background
UVB-induced DEG, ABC-type transporter (annotation).
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp6g11030 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp6g11030.1 CACTCCCTCC CCTCCACTCA CAGTCTCAGC TGCTGCCCCG CACTCCACCG ACTTGGCGAC TCCGACATTT ACTCTGTCCT CCTTTACAGC TCCAGCTCCA GCTGAATTCA ATTGAACTGG TCCGACTTGA ATGTGCTCTG CCTCGTTGAA TCCCATCATT CCCACTTCCC AGCTCGCTCC GACCCTCAGT CATCTGCGCC CCTCTGATTC CTTCATTTAC TCAGTTGCCT TGATCGTTCT GTAATTCTCG AGACAGAGTT TTGCGTCGGA GAGTGGAGCT GGTCATTCGT CCGAGGACAA TTTCTTTGGA TTCGTGGGGT GCTTGGATTT CGACAGAGAG AGAGAAGGAG AAGGAGACAT AGGAGTATGA CATCCGTGCC TGGGGAAAGG CCGGTGACTG TGGAAATCCG GGATCTGAAG TTTACTTATC CGGGAATAGA CGGGCACCCC CCTCCAGGTG CCAAGCCGTT GATCGAAGAT TTCTCCCTCA CATTGAGAGC AGGGGATCGT TGCCTTCTGG TTGGCGCCAA TGGAGCAGGT ATGCGAGCTG TGCATCCCTC CCCGAAGGTT TCTGTGCTCT GTTCAATTGT TTACCTTGCG GACACATATT TTTGTTTTTT TCTACGGGCT AAGTTTTCTG AAAGAATGGT GACCGTCCCA GAATTGCACT TCTAGACCGC TGACACACCG ACTGCTCCTT GTCAAGCTCA CGCACTGCAT GACGATCATA ATGTCACCCA CCATACTTAC ATTTGCAGAG AGATTTGCTT GCTTAACTCG AAAATTTAGC TGGACCAGAG TAGGCAACGT GTTTCTGACT CGCTTGTTAC CCTCATCGAC ATGTTGAAAT TCATGCACCG TGGGTGGGGT GAAGTGCAGG CAAAACTACT CTGTTGAAAA TTCTGGGGGG AAAGCACATG GTTGAGCCGG ATATGGTCCG AGTCCTGGGA AGATCAGCAT TTCACGACAC GGGTCTCACG ACCAGTGGAG ATTTGGCTTA TCTAGGCGGA GAAGTACGTG ATTGCATCGA GCAGATTTTT ATGGTTTTTC TTCATTTTGG ATGAAGACCC CGCTTGGAGA GAACTTAGCT GTACATTTGT CGAAGTGGGC CGTTGCCAGT TCTCTGTATT GAGGTTACAT TTCGGCCCTT CTTATTGTTT TGGCAGTGGA GGAGGGATGT GGCGTTCGCT GGCTTCGATG TGCCTCTACA GATGGACATT GCATCTGAGA AGATGATTTT TGGTGTGCAA GGTGTTGATC CCGAAAGAAG GGCCAAGCTT ATTAAGGTAT AGAACCGCTT TTCAGCACAT TTTCTTCCTG CTTTTTGTAC CTGGGGAAAA ATAAATGGAT GGACGCATTT ACGATCTTTT AATCGGTCTC TTTGTCGCCC TAGGTGCTGG ATATCGATCT CAACTGGCGG ATGCACATTG TGTCAGACGG GCAGCGACGG AGAGTTCAGA TCTGTATGGG TCTTCTACGG CCTTACAAGG TACAAGGTTT TATTGAGCAC CCTCTTCTTT TCTGGTCGTG CCAGTTTTCT TGTCGACCGT TGAAAGCTAC ACCGAATGTT TTCACCAACG ACCGACTGTG CAGCATCAGT CGGGCAGTCT TATATCCATG GCCTCGTAGC CAAATTTGCA TTCTGGCTGA GCAAACCTAC CAAGCTAGGT TTTCTGTTGT GAGAGTCAAC CTCTCAAACT GAATGTCTGA GAGCTTGAAT TGTCATTTTT CACCCACCCG TCTTGTCTTG CTAAGGTTCA CCGAGGAGAG GAGTGCTGCC TGTGACGTTG TTTGTCAAGT CGCGCACGAG CTGCGTCTAC ATTACTCTGT CTTTAATTTT ATTTGTTCTA AAATCGCTAA TATGTGCTTT GGTTTTGGTA GGTGCTTCTA CTGGATGAAA TCACCGTAGA CCTTGATGTC TTAGCAAGAG CTGACTTAAT CAGCTTTCTG AAAGAAGAAT GTGAACAAAA TGGAGCCACC ATCATTTACG CCACTCACAT TTTTGATGGT CTGGAATCAT GGCCCACACA TATGGTATGA ACCGGCTTCC GAGTGTATGA AGATTGAGAG CTGAATCTTC AGCTGGGTCT GTGTTGAAAT TCCCTAGGAT CTGCTGGTCA AGGTCTTGAG TGTTTACTTC AAACGTGTGC TGTATCTAAG AGGCAGACTT GCCGGGGCGT GATTGCAGGC GTACGTTGCA GATGGGAAAT TGCAGCTTGC TAAGCCCATT GGGGAAATTA GCGACTTGAA AGAGCTCTCA CTCATGGTAC GCATTTCTTT CTCTGATCTA GGCGACTTTA TTGTGGATGA CATCCTTCAG ACCTACAGTC TTAGCAGAAC TACGTAAGTC TTTGCAGATG AGAAGATGCA GCTTACAAAA TTCACAGTAA AAACTACGGA TTCGAACAAG CGCTCACTCG TGGTATGCAG TTTCCTCTCC GGGGGAGCTG ACCTTAGTGG CTATGGCGTC CTGGAGACAT CAAGTATTAG CATAATTGTT CAATATCCGT TCAAAATTTA GTGAAAGTCG ACCCCATTTT TACTAGTTTT ATGTTTGTTC TAGCACTTGT TGCTTGAGAG CTGAATGTGT AGCTAGGTCT GTGCTGATCC TGAACTGAAC CTGCTTTTCT GAGGTCTAAA ACGGAACTTG GCCTTTGGTT TTCAGAGAGC TATTGAGAAA TGGCTGAGGA AAGAATTAGA AGAGCAAAGG CGCATCAGAA AGCTAAGGCG AGCACAAGGT CTGCCCGAGT ACGACAGGCC AGTCGAGGGA TCAAGAGTTG CTGGAGGAGA TCCAGCAAAG GCTCAACTCC TGAACAATGG GTGGGCTGGG GGTCGTTTAC ATTCTACTCT TGCTGGTGAA GACAAGGCTC AGTTATACGA TCTGAGCTCG AACAGAGTGT TAAGATAGAC GAGCGCCGCA TTAATTCTGT AGATTGTTAG ACTGTGTTAC AGTTGTCTCA AAGGGCCGTT TTTCATTCGT CTAGCAGTAG TTGAAGACTG TTAATGATCT TTGTCCAGTA GTTTATTCTT TCTATTGTTT GAGCTTTGTA GCGAGCTCCC CATTCATCGA ACATCACCAG ACAGCAGGCT AGATTCAGCA GAGCAATGAT AGGTTTTAGG AATGTTGACC AAAGGTCACG CTTCTCATTT GTATTCTCAA AGTCAAATTA TACATCAAGA GAGTGTTATG CACACATTTG TCCTT |
mRNA UTR + CDS |
| >Mp6g11030.1 CACTCCCTCC CCTCCACTCA CAGTCTCAGC TGCTGCCCCG CACTCCACCG ACTTGGCGAC TCCGACATTT ACTCTGTCCT CCTTTACAGC TCCAGCTCCA GCTGAATTCA ATTGAACTGG TCCGACTTGA ATGTGCTCTG CCTCGTTGAA TCCCATCATT CCCACTTCCC AGCTCGCTCC GACCCTCAGT CATCTGCGCC CCTCTGATTC CTTCATTTAC TCAGTTGCCT TGATCGTTCT GTAATTCTCG AGACAGAGTT TTGCGTCGGA GAGTGGAGCT GGTCATTCGT CCGAGGACAA TTTCTTTGGA TTCGTGGGGT GCTTGGATTT CGACAGAGAG AGAGAAGGAG AAGGAGACAT AGGAGTATGA CATCCGTGCC TGGGGAAAGG CCGGTGACTG TGGAAATCCG GGATCTGAAG TTTACTTATC CGGGAATAGA CGGGCACCCC CCTCCAGGTG CCAAGCCGTT GATCGAAGAT TTCTCCCTCA CATTGAGAGC AGGGGATCGT TGCCTTCTGG TTGGCGCCAA TGGAGCAGGC AAAACTACTC TGTTGAAAAT TCTGGGGGGA AAGCACATGG TTGAGCCGGA TATGGTCCGA GTCCTGGGAA GATCAGCATT TCACGACACG GGTCTCACGA CCAGTGGAGA TTTGGCTTAT CTAGGCGGAG AATGGAGGAG GGATGTGGCG TTCGCTGGCT TCGATGTGCC TCTACAGATG GACATTGCAT CTGAGAAGAT GATTTTTGGT GTGCAAGGTG TTGATCCCGA AAGAAGGGCC AAGCTTATTA AGGTGCTGGA TATCGATCTC AACTGGCGGA TGCACATTGT GTCAGACGGG CAGCGACGGA GAGTTCAGAT CTGTATGGGT CTTCTACGGC CTTACAAGGT GCTTCTACTG GATGAAATCA CCGTAGACCT TGATGTCTTA GCAAGAGCTG ACTTAATCAG CTTTCTGAAA GAAGAATGTG AACAAAATGG AGCCACCATC ATTTACGCCA CTCACATTTT TGATGGTCTG GAATCATGGC CCACACATAT GGCGTACGTT GCAGATGGGA AATTGCAGCT TGCTAAGCCC ATTGGGGAAA TTAGCGACTT GAAAGAGCTC TCACTCATGA GAGCTATTGA GAAATGGCTG AGGAAAGAAT TAGAAGAGCA AAGGCGCATC AGAAAGCTAA GGCGAGCACA AGGTCTGCCC GAGTACGACA GGCCAGTCGA GGGATCAAGA GTTGCTGGAG GAGATCCAGC AAAGGCTCAA CTCCTGAACA ATGGGTGGGC TGGGGGTCGT TTACATTCTA CTCTTGCTGG TGAAGACAAG GCTCAGTTAT ACGATCTGAG CTCGAACAGA GTGTTAAGAT AGACGAGCGC CGCATTAATT CTGTAGATTG TTAGACTGTG TTACAGTTGT CTCAAAGGGC CGTTTTTCAT TCGTCTAGCA GTAGTTGAAG ACTGTTAATG ATCTTTGTCC AGTAGTTTAT TCTTTCTATT GTTTGAGCTT TGTAGCGAGC TCCCCATTCA TCGAACATCA CCAGACAGCA GGCTAGATTC AGCAGAGCAA TGATAGGTTT TAGGAATGTT GACCAAAGGT CACGCTTCTC ATTTGTATTC TCAAAGTCAA ATTATACATC AAGAGAGTGT TATGCACACA TTTGTCCTT |
CDS |
| >Mp6g11030.1 ATGACATCCG TGCCTGGGGA AAGGCCGGTG ACTGTGGAAA TCCGGGATCT GAAGTTTACT TATCCGGGAA TAGACGGGCA CCCCCCTCCA GGTGCCAAGC CGTTGATCGA AGATTTCTCC CTCACATTGA GAGCAGGGGA TCGTTGCCTT CTGGTTGGCG CCAATGGAGC AGGCAAAACT ACTCTGTTGA AAATTCTGGG GGGAAAGCAC ATGGTTGAGC CGGATATGGT CCGAGTCCTG GGAAGATCAG CATTTCACGA CACGGGTCTC ACGACCAGTG GAGATTTGGC TTATCTAGGC GGAGAATGGA GGAGGGATGT GGCGTTCGCT GGCTTCGATG TGCCTCTACA GATGGACATT GCATCTGAGA AGATGATTTT TGGTGTGCAA GGTGTTGATC CCGAAAGAAG GGCCAAGCTT ATTAAGGTGC TGGATATCGA TCTCAACTGG CGGATGCACA TTGTGTCAGA CGGGCAGCGA CGGAGAGTTC AGATCTGTAT GGGTCTTCTA CGGCCTTACA AGGTGCTTCT ACTGGATGAA ATCACCGTAG ACCTTGATGT CTTAGCAAGA GCTGACTTAA TCAGCTTTCT GAAAGAAGAA TGTGAACAAA ATGGAGCCAC CATCATTTAC GCCACTCACA TTTTTGATGG TCTGGAATCA TGGCCCACAC ATATGGCGTA CGTTGCAGAT GGGAAATTGC AGCTTGCTAA GCCCATTGGG GAAATTAGCG ACTTGAAAGA GCTCTCACTC ATGAGAGCTA TTGAGAAATG GCTGAGGAAA GAATTAGAAG AGCAAAGGCG CATCAGAAAG CTAAGGCGAG CACAAGGTCT GCCCGAGTAC GACAGGCCAG TCGAGGGATC AAGAGTTGCT GGAGGAGATC CAGCAAAGGC TCAACTCCTG AACAATGGGT GGGCTGGGGG TCGTTTACAT TCTACTCTTG CTGGTGAAGA CAAGGCTCAG TTATACGATC TGAGCTCGAA CAGAGTGTTA AGATAG |
Protein |
| >Mp6g11030.1 MTSVPGERPV TVEIRDLKFT YPGIDGHPPP GAKPLIEDFS LTLRAGDRCL LVGANGAGKT TLLKILGGKH MVEPDMVRVL GRSAFHDTGL TTSGDLAYLG GEWRRDVAFA GFDVPLQMDI ASEKMIFGVQ GVDPERRAKL IKVLDIDLNW RMHIVSDGQR RRVQICMGLL RPYKVLLLDE ITVDLDVLAR ADLISFLKEE CEQNGATIIY ATHIFDGLES WPTHMAYVAD GKLQLAKPIG EISDLKELSL MRAIEKWLRK ELEEQRRIRK LRRAQGLPEY DRPVEGSRVA GGDPAKAQLL NNGWAGGRLH STLAGEDKAQ LYDLSSNRVL R |