Mp6g11940
Description
Annotation
| Database | ID | Description |
|---|---|---|
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. |
| Gene3D | G3DSA:2.40.480.10 | - |
| Pfam | PF03018 | Dirigent-like protein |
| PANTHER | PTHR21495 | NUCLEOPORIN-RELATED |
| MapolyID | Mapoly0135s0042 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpDIR50 | Secondary metabolism enzyme | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp6g11940 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp6g11940.1 GTCGCGAGAC CAGCTCGCTC TCAGCTCATG CGAGGTCTCG TGCGCGAGAC TCGAGCCTCA TTGGTCGTGA AGAGCTTTAG CAGGGTACCA GCAGCGATCA GACCGACGTC AGAACGTTCG ATCAGTGAGG TCAATGGTAT AGAAGTCTTG ATCAGGAGAC CTTCGGAGAT GACCACCATC ACAAGAATTC GTAGAGCAGG ACCGATCGTC TGCGCTCAGT GGCAGAAGGC GACACAGTCG CTTTCCCCGC GCAAGAGTCG CGTATATGAG CGAGCGCATC GGCAGCTGTT CTCATCAGCC GTTCACCATT AGATCTGATT GAGAATAGAA GAGGCCTATC CCAGAACACA GGACAACGAA GGTTCTCTCA GGCACCGCGA GCGAGTGAAG ACATCGCACT TTTCATAAAC GTGTAGCATC GGGCTGTCGA CGGACTGACA GATTGACTGA CTGACAATAT GGAGAGAACT CATGGATCGA CTCTGGCGGT GTTCGTCACT GCTCTGGTGC TACTCTCGTC GGGATGCAGC GCCATGAAGA TGAAGCCTGT GAGCTTCGCA TACTACTTGC ACGACGACTA CGTGCCGCCG GACACGACTT CTGTGCAGGT GGCCAGTTCC AATGGAACTC TCACGGGCAC ATTCCAGTTT GGTGATATTG CGGTGTTCGA CAGCCCTCTC AGAGAGGGTA CTGCCAACGA TTCGACTTTG TTCGGTTACG GATCGGGCGA GCTGGTGTCG CTGAAACAGC CATACATGAG ATTCATTACC TTCGTGCACG ATGTCACTGT CCCCGGCTAC TCTGGTACCC TTTCTTGCTC GGGCAGGTTC AACTTCAGTG CCCCTTCATG GGAGGTGGGC GTCAACTCTG GCACGGGCTC CTTCAGAGGA GCCAGCGGCT ACTATACTGT CAGCATCGCG GTTCCCAACA CCGCTGGTTA CGTCCTCAAG TACGAAGCGA ATCTGATGCT TCCCAAACAC TGATCTCATC ACCCGCGATT TGGGAATGTC ATCCAGATGA GTCGACTGAC TGAGTCTCTA TCTTACCGCT CATCGTGGAG TGCTCGATGT TGACGGTGTT CTTGACGCAT AAGGCTTCAG CTCTTAGATC GAGCCGCAAT GGGAGACGTG CAGTCGGCTC AGCTATTTGG GACTGAGAAA TTCGATTTTT TTGTGGTCTT GAGGTGCATG ATTGTGGTCG GAGAGTCCAT GTCCCGCCCC GGCCAGCCCC GCGACCGGCG TGCGTAGTCG ATGATTTTTG TAGAAGATAT TTCCTTCACG AATAAAGGTA ACGAGGAAAG AGGCAACGGC TTCCTGGACC TCGATACATT TCCTGCGAAA GTAGTGTAGT CAGAATTCTT TCACCGAGTT GTTCTGGTGA TGTCGGCCTT AGATATGGGC TTGTTTACTT GTAGCCGACT GTTCTCGTTT GTTGCGTTCG CAAATGTGTA GATCATGATT CACTCCAATC AGACCACAAT AAAAGGCCTG TCCCAAGATA AATTCTTTGC |
mRNA UTR + CDS |
| >Mp6g11940.1 GTCGCGAGAC CAGCTCGCTC TCAGCTCATG CGAGGTCTCG TGCGCGAGAC TCGAGCCTCA TTGGTCGTGA AGAGCTTTAG CAGGGTACCA GCAGCGATCA GACCGACGTC AGAACGTTCG ATCAGTGAGG TCAATGGTAT AGAAGTCTTG ATCAGGAGAC CTTCGGAGAT GACCACCATC ACAAGAATTC GTAGAGCAGG ACCGATCGTC TGCGCTCAGT GGCAGAAGGC GACACAGTCG CTTTCCCCGC GCAAGAGTCG CGTATATGAG CGAGCGCATC GGCAGCTGTT CTCATCAGCC GTTCACCATT AGATCTGATT GAGAATAGAA GAGGCCTATC CCAGAACACA GGACAACGAA GGTTCTCTCA GGCACCGCGA GCGAGTGAAG ACATCGCACT TTTCATAAAC GTGTAGCATC GGGCTGTCGA CGGACTGACA GATTGACTGA CTGACAATAT GGAGAGAACT CATGGATCGA CTCTGGCGGT GTTCGTCACT GCTCTGGTGC TACTCTCGTC GGGATGCAGC GCCATGAAGA TGAAGCCTGT GAGCTTCGCA TACTACTTGC ACGACGACTA CGTGCCGCCG GACACGACTT CTGTGCAGGT GGCCAGTTCC AATGGAACTC TCACGGGCAC ATTCCAGTTT GGTGATATTG CGGTGTTCGA CAGCCCTCTC AGAGAGGGTA CTGCCAACGA TTCGACTTTG TTCGGTTACG GATCGGGCGA GCTGGTGTCG CTGAAACAGC CATACATGAG ATTCATTACC TTCGTGCACG ATGTCACTGT CCCCGGCTAC TCTGGTACCC TTTCTTGCTC GGGCAGGTTC AACTTCAGTG CCCCTTCATG GGAGGTGGGC GTCAACTCTG GCACGGGCTC CTTCAGAGGA GCCAGCGGCT ACTATACTGT CAGCATCGCG GTTCCCAACA CCGCTGGTTA CGTCCTCAAG TACGAAGCGA ATCTGATGCT TCCCAAACAC TGATCTCATC ACCCGCGATT TGGGAATGTC ATCCAGATGA GTCGACTGAC TGAGTCTCTA TCTTACCGCT CATCGTGGAG TGCTCGATGT TGACGGTGTT CTTGACGCAT AAGGCTTCAG CTCTTAGATC GAGCCGCAAT GGGAGACGTG CAGTCGGCTC AGCTATTTGG GACTGAGAAA TTCGATTTTT TTGTGGTCTT GAGGTGCATG ATTGTGGTCG GAGAGTCCAT GTCCCGCCCC GGCCAGCCCC GCGACCGGCG TGCGTAGTCG ATGATTTTTG TAGAAGATAT TTCCTTCACG AATAAAGGTA ACGAGGAAAG AGGCAACGGC TTCCTGGACC TCGATACATT TCCTGCGAAA GTAGTGTAGT CAGAATTCTT TCACCGAGTT GTTCTGGTGA TGTCGGCCTT AGATATGGGC TTGTTTACTT GTAGCCGACT GTTCTCGTTT GTTGCGTTCG CAAATGTGTA GATCATGATT CACTCCAATC AGACCACAAT AAAAGGCCTG TCCCAAGATA AATTCTTTGC |
CDS |
| >Mp6g11940.1 ATGGAGAGAA CTCATGGATC GACTCTGGCG GTGTTCGTCA CTGCTCTGGT GCTACTCTCG TCGGGATGCA GCGCCATGAA GATGAAGCCT GTGAGCTTCG CATACTACTT GCACGACGAC TACGTGCCGC CGGACACGAC TTCTGTGCAG GTGGCCAGTT CCAATGGAAC TCTCACGGGC ACATTCCAGT TTGGTGATAT TGCGGTGTTC GACAGCCCTC TCAGAGAGGG TACTGCCAAC GATTCGACTT TGTTCGGTTA CGGATCGGGC GAGCTGGTGT CGCTGAAACA GCCATACATG AGATTCATTA CCTTCGTGCA CGATGTCACT GTCCCCGGCT ACTCTGGTAC CCTTTCTTGC TCGGGCAGGT TCAACTTCAG TGCCCCTTCA TGGGAGGTGG GCGTCAACTC TGGCACGGGC TCCTTCAGAG GAGCCAGCGG CTACTATACT GTCAGCATCG CGGTTCCCAA CACCGCTGGT TACGTCCTCA AGTACGAAGC GAATCTGATG CTTCCCAAAC ACTGA |
Protein |
| >Mp6g11940.1 MERTHGSTLA VFVTALVLLS SGCSAMKMKP VSFAYYLHDD YVPPDTTSVQ VASSNGTLTG TFQFGDIAVF DSPLREGTAN DSTLFGYGSG ELVSLKQPYM RFITFVHDVT VPGYSGTLSC SGRFNFSAPS WEVGVNSGTG SFRGASGYYT VSIAVPNTAG YVLKYEANLM LPKH |