Mp6g12540



Description

Annotation

Database ID Description
PANTHER PTHR47483 BETA-ARABINOFURANOSYLTRANSFERASE RAY1
Pfam PF03407 Nucleotide-diphospho-sugar transferase
KEGG K20892 beta-arabinofuranosyltransferase [EC:2.4.2.-]
MapolyID Mapoly0059s0093 -
GO GO:0016757 glycosyltransferase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpGT77.4 Cell wall related protein Provisional

Associated Literature (AI-based literature mining, Beta-version)

Cell wall related protein (from nomenclature)

0 core 1 peripheral

Kang HS, Tong X, Mariette A, Leong M, Beahan C, Flores-Sandoval E, Pedersen GB, Rautengarten C, Bowman JL, Ebert B, Bacic A, Doblin MS, Persson S, Lampugnani ER. (2025) · The Plant journal : for cell and molecular biology  research sequence subject
M. polymorpha RAY1 ortholog identified as a cell wall GT candidate by phylogenetic analysis.

Transcript models

Transcript ID Location Sequences Extract region
Mp6g12540.1 chr6:15693310..15698105 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp6g12540.2 chr6:15693310..15698105 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp6g12540 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp6g12540 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.