Mp6g12800



Description

Annotation

Database ID Description
Gene3D G3DSA:3.40.50.80 -
Pfam PF08022 FAD-binding domain
Pfam PF01794 Ferric reductase like transmembrane component
Pfam PF08030 Ferric reductase NAD binding domain
PANTHER PTHR11972 NADPH OXIDASE
ProSiteProfiles PS51384 Ferredoxin reductase-type FAD binding domain profile.
CDD cd06186 NOX_Duox_like_FAD_NADP
SFLD SFLDS00052 Ferric Reductase Domain
SUPERFAMILY SSF52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
SFLD SFLDG01168 Ferric reductase subgroup (FRE)
KEGG K00521 ferric-chelate reductase [EC:1.16.1.7]
KOG KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins; [PQ]
MapolyID Mapoly0059s0068 -
GO GO:0005886 plasma membrane
GO GO:0016491 oxidoreductase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpFRO3 Fe homeostasis protein Provisional

Associated Literature (AI-based literature mining, Beta-version)

Fe homeostasis protein (from nomenclature)

0 core 1 peripheral

Lo, J. C., et al. (2016) · New Phytologist  research experimental background
MpFRO3 ferric reductase oxidase

Transcript models

Transcript ID Location Sequences Extract region
Mp6g12800.1 chr6:15981044..15986244 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp6g12800 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp6g12800 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.