Mp6g13500



Description

Annotation

Database ID Description
Gene3D G3DSA:3.40.50.2000 Glycogen Phosphorylase B;
FunFam G3DSA:3.40.50.2000:FF:000060 Glycosyltransferase
PANTHER PTHR48045 UDP-GLYCOSYLTRANSFERASE 72B1
SUPERFAMILY SSF53756 UDP-Glycosyltransferase/glycogen phosphorylase
CDD cd03784 GT1_Gtf-like
Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase
KOG KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase; N-term missing; C-term missing; [GC]
MapolyID Mapoly0047s0001 -
GO GO:0008194 UDP-glycosyltransferase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpUGT25 UDP glycosyl transferase, Secondary metabolism enzyme Provisional

Associated Literature (AI-based literature mining, Beta-version)

UDP-glucosyl transferase (Mapoly0047s0001) marker, the only gene down-regulated in MpBHLH12ox but up-regulated in MpMYB14 lines, marking network divergence.

0 core 1 peripheral

Arai, H., et al. (2019) · Journal of Plant Research  research sequence comparator
UDP-glucosyl transferase (Mapoly0047s0001) marker, the only gene down-regulated in MpBHLH12ox but up-regulated in MpMYB14 lines, marking network divergence.

Transcript models

Transcript ID Location Sequences Extract region
Mp6g13500.1 chr6:16873981..16877166 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp6g13500 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp6g13500 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.