Mp6g13790



Description

Annotation

Database ID Description
FunFam G3DSA:3.40.190.80:FF:000001 Fructose-1,6-bisphosphatase class 1
PANTHER PTHR11556 FRUCTOSE-1,6-BISPHOSPHATASE-RELATED
PIRSF PIRSF000904 FBPtase_SBPase
SUPERFAMILY SSF56655 Carbohydrate phosphatase
Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain
Gene3D G3DSA:3.40.190.80 -
Gene3D G3DSA:3.30.540.10 -
Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp].
FunFam G3DSA:3.30.540.10:FF:000014 Fructose-1,6-bisphosphatase, chloroplastic
Pfam PF18913 Fructose-1-6-bisphosphatase, C-terminal domain
CDD cd00354 FBPase
PRINTS PR00115 Fructose-1,6-bisphosphatase signature
PIRSF PIRSF500210 FBPtase
ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site.
KEGG K03841 fructose-1,6-bisphosphatase I [EC:3.1.3.11]
KOG KOG1458 Fructose-1,6-bisphosphatase; [G]
MapolyID Mapoly0047s0030 -
GO GO:0006094 gluconeogenesis
GO GO:0042578 phosphoric ester hydrolase activity
GO GO:0006000 fructose metabolic process
GO GO:0005986 sucrose biosynthetic process
GO GO:0006002 fructose 6-phosphate metabolic process
GO GO:0016791 phosphatase activity
GO GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity
GO GO:0030388 fructose 1,6-bisphosphate metabolic process
GO GO:0005737 cytoplasm
GO GO:0005975 carbohydrate metabolic process
GO GO:0005829 cytosol

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

PhANG ortholog included in qPCR transcript quantification of photosynthesis-associated genes.

0 core 1 peripheral

Honkanen, S., et al. (2022) · New Phytologist  research experimental background
PhANG ortholog included in qPCR transcript quantification of photosynthesis-associated genes.

Transcript models

Transcript ID Location Sequences Extract region
Mp6g13790.1 chr6:17163702..17167287 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp6g13790 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp6g13790 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.