Mp6g14520
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:1.10.3460.10 | Chlorophyll a/b binding protein domain |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Pfam | PF00504 | Chlorophyll A-B binding protein |
| SUPERFAMILY | SSF103511 | Chlorophyll a-b binding protein |
| PANTHER | PTHR14154 | UPF0041 BRAIN PROTEIN 44-RELATED |
| MapolyID | Mapoly0047s0106 | - |
Nomenclature
No gene symbols are registered for this gene.
Associated Literature (AI-based literature mining, Beta-version)
UVB-induced ELIP1 (early light-induced protein 1), characteristic UVB-response gene (annotation).
0 core 1 peripheral
Clayton, W. A., et al. (2018)
· Plant Journal research experimental background
UVB-induced ELIP1 (early light-induced protein 1), characteristic UVB-response gene (annotation).
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp6g14520 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp6g14520.1 GTGTGCATGA AGAGAACGAA CGTTCAGAGA CGTTCAGAGT CTAGAGAATT CGGGAGGACT GGAGTGGTCG GACCCAATGA TGACGGGCGC TGTCCTGCGC CTCTCTCATG AATCAGGCGC GTCCCAGTGC ACGTCCTTCG CCATGTACGA GGCGTGGCTG CGTCCCCGCC CTACGTTCGC TTCCTTTCTT CTCGTATGTG CGATTCTCCG GGACCAACCC CTCCCTCCCT CCGACGTCGA ATATAAAATG TCTACAGAGA CAACGGAGAG AGCATTCATT ACGCACTCTC TGCCGTTTCT TGCCTACTGT CTTCATTCGA CAATCTGAGA AATCTCTTCC TCTCCCCCTC GTCGCGCTTG TGTTTCGGTA AGCCTCGTCG TCGCCCTCTC GCAGATCATT TCCGGGTTGT GAAGTTCTAC GCGCTCAGGA TTGCAGTGTC CAATTCGGAG AGGAGTCTTC GTCGCTCGCA ATATCCAGTT TTCTTGAATG TGTCTGTGTG ATGTCGAGAG CGACGCAGCG GTAAAGGGTT GTGATATAGT TTTGGAGTTT TGCAGTAGGC CTCGATTATG AGACCAAGAT TGGCCTTCAC AGAGATGCTG CGATTTGACG GCCTGCGTTA CCAGGCTGAC CTTCCGAGTA TTAATAGTAT TCTTCTCGCG GGGATGATGA TGCCGCGGTG AACGTGTCGG CCGCACTGTA GACTGATAGA AATTTGATGA TATTGTGCAG ATTTTAAAAA ACTGCAAGTA AACCGAAATG GCCGCCGTCG CTGCAATGAT GGCTTCTACC GGCACGTCGC ACGCGCTCCG CATGAGGCCT GCTTCCTTCG CCTTGTCCAC CGCTTCTCGA TGCCCTGCTC TCAGCACCAG GAGATTCGTT CAAATCAGGT GTATGGCAGA AGTAAGTTCG TTCTCGTCTT AACTAAGTCC ATCCAATTTG AAGTACGTGT TTGTTTACCA CCTCTCAAGG GTACCATGAA CAGTGTGGAA GATGTATGTT CTGCTGATGT TTTTGCCTGC CCTATGTACG AAAGATAATT CGCATGAGAC TTACACACTG GAAACTGAAT GTTGTTACAG CCCGAGAAAG CACCTGACGC ACCCGCCTCA GTTACTCCCC CTGCATCTCC TTCAGCATCT TCGCCTACTC CAGCTGCATC AACTGTAACC CCTATCGCCA GCAAGCCCAA TGTGACTTCC AAGCCCAAGG TACAATAATT CACACCTCAG ATCATTATAT TTTCTCCGTT GTTGCTGTGG AATTGAATTT CTGATCTGAA ATAGTGTACT CTTTAATAGA CAAGGGTCGT GTGACCTGAC ATGTGCAAAT TGTGTATGTA CTTAGCAGGT GAGCACCAAG TTCGAAGACA TTTTCGCGTT TTCTGGACCT GCACCTGAAC TGATCAACGG AAGGCTTGCG ATGTTGGGAT TCGTCGGCGC GTTGGCAGTA GAACTGGGAA CTGGCATCAG TTTCACTGAC CAACTCCAGA ATGGCGGACT TGGTTTGGGC GCTTTCGTGG CAGTTCTATT CACTGCCGCC TCCCTGATTC CCATGTTCCA AGGCGTGACC GCCGAAAGTA AGTCCAAGAG CTTCTGGTCG TCTCAAGCCG AGAAAGTGAA CGGACGATTA GCAATGGTTG GCCTGGTAGC ACTTGCCATC ACCGAGTTTG TGAACGGCAG TCCTCTTGTG TAAGGGCTCT CCGAGATAGG AATTCCCTCG ATTTTGGAAT TGCTCTTTAG TTAGGTAGCA CAGACTAGAT CAAGCCCCAA AATGTAGAGG ATAAAATAGC TTTTGCAGTA CTAAATCATA TCATTAGCTT GTAATATACA TTTTGTACTG TGTAAGATAC AGGAATTTTT CCCCATAATA CGAAATTTTA TCTGCGTGGA ACCTTCTTCA ATAAAAACGA GACATTTGAT GGCATTTTCA ACGG |
mRNA UTR + CDS |
| >Mp6g14520.1 GTGTGCATGA AGAGAACGAA CGTTCAGAGA CGTTCAGAGT CTAGAGAATT CGGGAGGACT GGAGTGGTCG GACCCAATGA TGACGGGCGC TGTCCTGCGC CTCTCTCATG AATCAGGCGC GTCCCAGTGC ACGTCCTTCG CCATGTACGA GGCGTGGCTG CGTCCCCGCC CTACGTTCGC TTCCTTTCTT CTCGTATGTG CGATTCTCCG GGACCAACCC CTCCCTCCCT CCGACGTCGA ATATAAAATG TCTACAGAGA CAACGGAGAG AGCATTCATT ACGCACTCTC TGCCGTTTCT TGCCTACTGT CTTCATTCGA CAATCTGAGA AATCTCTTCC TCTCCCCCTC GTCGCGCTTG TGTTTCGATT TTAAAAAACT GCAAGTAAAC CGAAATGGCC GCCGTCGCTG CAATGATGGC TTCTACCGGC ACGTCGCACG CGCTCCGCAT GAGGCCTGCT TCCTTCGCCT TGTCCACCGC TTCTCGATGC CCTGCTCTCA GCACCAGGAG ATTCGTTCAA ATCAGGTGTA TGGCAGAACC CGAGAAAGCA CCTGACGCAC CCGCCTCAGT TACTCCCCCT GCATCTCCTT CAGCATCTTC GCCTACTCCA GCTGCATCAA CTGTAACCCC TATCGCCAGC AAGCCCAATG TGACTTCCAA GCCCAAGCAG GTGAGCACCA AGTTCGAAGA CATTTTCGCG TTTTCTGGAC CTGCACCTGA ACTGATCAAC GGAAGGCTTG CGATGTTGGG ATTCGTCGGC GCGTTGGCAG TAGAACTGGG AACTGGCATC AGTTTCACTG ACCAACTCCA GAATGGCGGA CTTGGTTTGG GCGCTTTCGT GGCAGTTCTA TTCACTGCCG CCTCCCTGAT TCCCATGTTC CAAGGCGTGA CCGCCGAAAG TAAGTCCAAG AGCTTCTGGT CGTCTCAAGC CGAGAAAGTG AACGGACGAT TAGCAATGGT TGGCCTGGTA GCACTTGCCA TCACCGAGTT TGTGAACGGC AGTCCTCTTG TGTAAGGGCT CTCCGAGATA GGAATTCCCT CGATTTTGGA ATTGCTCTTT AGTTAGGTAG CACAGACTAG ATCAAGCCCC AAAATGTAGA GGATAAAATA GCTTTTGCAG TACTAAATCA TATCATTAGC TTGTAATATA CATTTTGTAC TGTGTAAGAT ACAGGAATTT TTCCCCATAA TACGAAATTT TATCTGCGTG GAACCTTCTT CAATAAAAAC GAGACATTTG ATGGCATTTT CAACGG |
CDS |
| >Mp6g14520.1 ATGGCCGCCG TCGCTGCAAT GATGGCTTCT ACCGGCACGT CGCACGCGCT CCGCATGAGG CCTGCTTCCT TCGCCTTGTC CACCGCTTCT CGATGCCCTG CTCTCAGCAC CAGGAGATTC GTTCAAATCA GGTGTATGGC AGAACCCGAG AAAGCACCTG ACGCACCCGC CTCAGTTACT CCCCCTGCAT CTCCTTCAGC ATCTTCGCCT ACTCCAGCTG CATCAACTGT AACCCCTATC GCCAGCAAGC CCAATGTGAC TTCCAAGCCC AAGCAGGTGA GCACCAAGTT CGAAGACATT TTCGCGTTTT CTGGACCTGC ACCTGAACTG ATCAACGGAA GGCTTGCGAT GTTGGGATTC GTCGGCGCGT TGGCAGTAGA ACTGGGAACT GGCATCAGTT TCACTGACCA ACTCCAGAAT GGCGGACTTG GTTTGGGCGC TTTCGTGGCA GTTCTATTCA CTGCCGCCTC CCTGATTCCC ATGTTCCAAG GCGTGACCGC CGAAAGTAAG TCCAAGAGCT TCTGGTCGTC TCAAGCCGAG AAAGTGAACG GACGATTAGC AATGGTTGGC CTGGTAGCAC TTGCCATCAC CGAGTTTGTG AACGGCAGTC CTCTTGTGTA A |
Protein |
| >Mp6g14520.1 MAAVAAMMAS TGTSHALRMR PASFALSTAS RCPALSTRRF VQIRCMAEPE KAPDAPASVT PPASPSASSP TPAASTVTPI ASKPNVTSKP KQVSTKFEDI FAFSGPAPEL INGRLAMLGF VGALAVELGT GISFTDQLQN GGLGLGAFVA VLFTAASLIP MFQGVTAESK SKSFWSSQAE KVNGRLAMVG LVALAITEFV NGSPLV |
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp6g14520.2 GTGTGCATGA AGAGAACGAA CGTTCAGAGA CGTTCAGAGT CTAGAGAATT CGGGAGGACT GGAGTGGTCG GACCCAATGA TGACGGGCGC TGTCCTGCGC CTCTCTCATG AATCAGGCGC GTCCCAGTGC ACGTCCTTCG CCATGTACGA GGCGTGGCTG CGTCCCCGCC CTACGTTCGC TTCCTTTCTT CTCGTATGTG CGATTCTCCG GGACCAACCC CTCCCTCCCT CCGACGTCGA ATATAAAATG TCTACAGAGA CAACGGAGAG AGCATTCATT ACGCACTCTC TGCCGTTTCT TGCCTACTGT CTTCATTCGA CAATCTGAGA AATCTCTTCC TCTCCCCCTC GTCGCGCTTG TGTTTCGGTA AGCCTCGTCG TCGCCCTCTC GCAGATCATT TCCGGGTTGT GAAGTTCTAC GCGCTCAGGA TTGCAGTGTC CAATTCGGAG AGGAGTCTTC GTCGCTCGCA ATATCCAGTT TTCTTGAATG TGTCTGTGTG ATGTCGAGAG CGACGCAGCG GTAAAGGGTT GTGATATAGT TTTGGAGTTT TGCAGTAGGC CTCGATTATG AGACCAAGAT TGGCCTTCAC AGAGATGCTG CGATTTGACG GCCTGCGTTA CCAGGCTGAC CTTCCGAGTA TTAATAGTAT TCTTCTCGCG GGGATGATGA TGCCGCGGTG AACGTGTCGG CCGCACTGTA GACTGATAGA AATTTGATGA TATTGTGCAG ATTTTAAAAA ACTGCAAGTA AACCGAAATG GCCGCCGTCG CTGCAATGAT GGCTTCTACC GGCACGTCGC ACGCGCTCCG CATGAGGCCT GCTTCCTTCG CCTTGTCCAC CGCTTCTCGA TGCCCTGCTC TCAGCACCAG GAGATTCGTT CAAATCAGGT GTATGGCAGA AGTAAGTTCG TTCTCGTCTT AACTAAGTCC ATCCAATTTG AAGTACGTGT TTGTTTACCA CCTCTCAAGG GTACCATGAA CAGTGTGGAA GATGTATGTT CTGCTGATGT TTTTGCCTGC CCTATGTACG AAAGATAATT CGCATGAGAC TTACACACTG GAAACTGAAT GTTGTTACAG CCCGAGAAAG CACCTGACGC ACCCGCCTCA GTTACTCCCC CTGCATCTCC TTCAGCATCT TCGCCTACTC CAGCTGCATC AACTGTAACC CCTATCGCCA GCAAGCCCAA TGTGACTTCC AAGCCCAAGG TACAATAATT CACACCTCAG ATCATTATAT TTTCTCCGTT GTTGCTGTGG AATTGAATTT CTGATCTGAA ATAGTGTACT CTTTAATAGA CAAGGGTCGT GTGACCTGAC ATGTGCAAAT TGTGTATGTA CTTAGCAGGT GAGCACCAAG TTCGAAGACA TTTTCGCGTT TTCTGGACCT GCACCTGAAC TGATCAACGG AAGGCTTGCG ATGTTGGGAT TCGTCGGCGC GTTGGCAGTA GAACTGGGAA CTGGCATCAG TTTCACTGAC CAACTCCAGA ATGGCGGACT TGGTTTGGGC GCTTTCGTGG CAGTTCTATT CACTGCCGCC TCCCTGATTC CCATGTTCCA AGGCGTGACC GCCGAAAGTA AGTCCAAGAG CTTCTGGTCG TCTCAAGCCG AGAAAGTGAA CGGACGATTA GCAATGGTTG GCCTGGTAGC ACTTGCCATC ACCGAGTTTG TGAACGGCAG TCCTCTTGTG TAAGGGCTCT CCGAGATAGG AATTCCCTCG ATTTTGGAAT TGCTCTTTAG TTAGGTAGCA CAGACTAGAT CAAGCCCCAA AATGTAGAGG ATAAAATAGC TTTTGCAGTA CTAAATCATA TCATTAGCTT GTAATATACA TTTTGTACTG TGTAAGATAC AGGAATTTTT CCCCATAATA CGAAATTTTA TCTGCGTGGA ACCTTCTTCA ATAAAAACGA GACATTTGAT GGCATTTTCA ACGG |
mRNA UTR + CDS |
| >Mp6g14520.2 GTGTGCATGA AGAGAACGAA CGTTCAGAGA CGTTCAGAGT CTAGAGAATT CGGGAGGACT GGAGTGGTCG GACCCAATGA TGACGGGCGC TGTCCTGCGC CTCTCTCATG AATCAGGCGC GTCCCAGTGC ACGTCCTTCG CCATGTACGA GGCGTGGCTG CGTCCCCGCC CTACGTTCGC TTCCTTTCTT CTCGTATGTG CGATTCTCCG GGACCAACCC CTCCCTCCCT CCGACGTCGA ATATAAAATG TCTACAGAGA CAACGGAGAG AGCATTCATT ACGCACTCTC TGCCGTTTCT TGCCTACTGT CTTCATTCGA CAATCTGAGA AATCTCTTCC TCTCCCCCTC GTCGCGCTTG TGTTTCGATT TTAAAAAACT GCAAGTAAAC CGAAATGGCC GCCGTCGCTG CAATGATGGC TTCTACCGGC ACGTCGCACG CGCTCCGCAT GAGGCCTGCT TCCTTCGCCT TGTCCACCGC TTCTCGATGC CCTGCTCTCA GCACCAGGAG ATTCGTTCAA ATCAGGTGTA TGGCAGAACC CGAGAAAGCA CCTGACGCAC CCGCCTCAGT TACTCCCCCT GCATCTCCTT CAGCATCTTC GCCTACTCCA GCTGCATCAA CTGTAACCCC TATCGCCAGC AAGCCCAATG TGACTTCCAA GCCCAAGGTG AGCACCAAGT TCGAAGACAT TTTCGCGTTT TCTGGACCTG CACCTGAACT GATCAACGGA AGGCTTGCGA TGTTGGGATT CGTCGGCGCG TTGGCAGTAG AACTGGGAAC TGGCATCAGT TTCACTGACC AACTCCAGAA TGGCGGACTT GGTTTGGGCG CTTTCGTGGC AGTTCTATTC ACTGCCGCCT CCCTGATTCC CATGTTCCAA GGCGTGACCG CCGAAAGTAA GTCCAAGAGC TTCTGGTCGT CTCAAGCCGA GAAAGTGAAC GGACGATTAG CAATGGTTGG CCTGGTAGCA CTTGCCATCA CCGAGTTTGT GAACGGCAGT CCTCTTGTGT AAGGGCTCTC CGAGATAGGA ATTCCCTCGA TTTTGGAATT GCTCTTTAGT TAGGTAGCAC AGACTAGATC AAGCCCCAAA ATGTAGAGGA TAAAATAGCT TTTGCAGTAC TAAATCATAT CATTAGCTTG TAATATACAT TTTGTACTGT GTAAGATACA GGAATTTTTC CCCATAATAC GAAATTTTAT CTGCGTGGAA CCTTCTTCAA TAAAAACGAG ACATTTGATG GCATTTTCAA CGG |
CDS |
| >Mp6g14520.2 ATGGCCGCCG TCGCTGCAAT GATGGCTTCT ACCGGCACGT CGCACGCGCT CCGCATGAGG CCTGCTTCCT TCGCCTTGTC CACCGCTTCT CGATGCCCTG CTCTCAGCAC CAGGAGATTC GTTCAAATCA GGTGTATGGC AGAACCCGAG AAAGCACCTG ACGCACCCGC CTCAGTTACT CCCCCTGCAT CTCCTTCAGC ATCTTCGCCT ACTCCAGCTG CATCAACTGT AACCCCTATC GCCAGCAAGC CCAATGTGAC TTCCAAGCCC AAGGTGAGCA CCAAGTTCGA AGACATTTTC GCGTTTTCTG GACCTGCACC TGAACTGATC AACGGAAGGC TTGCGATGTT GGGATTCGTC GGCGCGTTGG CAGTAGAACT GGGAACTGGC ATCAGTTTCA CTGACCAACT CCAGAATGGC GGACTTGGTT TGGGCGCTTT CGTGGCAGTT CTATTCACTG CCGCCTCCCT GATTCCCATG TTCCAAGGCG TGACCGCCGA AAGTAAGTCC AAGAGCTTCT GGTCGTCTCA AGCCGAGAAA GTGAACGGAC GATTAGCAAT GGTTGGCCTG GTAGCACTTG CCATCACCGA GTTTGTGAAC GGCAGTCCTC TTGTGTAA |
Protein |
| >Mp6g14520.2 MAAVAAMMAS TGTSHALRMR PASFALSTAS RCPALSTRRF VQIRCMAEPE KAPDAPASVT PPASPSASSP TPAASTVTPI ASKPNVTSKP KVSTKFEDIF AFSGPAPELI NGRLAMLGFV GALAVELGTG ISFTDQLQNG GLGLGAFVAV LFTAASLIPM FQGVTAESKS KSFWSSQAEK VNGRLAMVGL VALAITEFVN GSPLV |