Mp6g14550



Description

Annotation

Database ID Description
Gene3D G3DSA:2.60.120.200 -
SMART SM00220 serkin_6
FunFam G3DSA:3.30.200.20:FF:000039 receptor-like protein kinase FERONIA
FunFam G3DSA:1.10.510.10:FF:000240 Lectin-domain containing receptor kinase A4.3
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
SUPERFAMILY SSF49899 Concanavalin A-like lectins/glucanases
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
CDD cd14066 STKc_IRAK
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR27007 -
ProSiteProfiles PS50011 Protein kinase domain profile.
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
Pfam PF00139 Legume lectin domain
Pfam PF00069 Protein kinase domain
KOG KOG1187 Serine/threonine protein kinase; [T]
MapolyID Mapoly0047s0109 -
GO GO:0005524 ATP binding
GO GO:0030246 carbohydrate binding
GO GO:0005886 plasma membrane
GO GO:0004672 protein kinase activity
GO GO:0006468 protein phosphorylation

Nomenclature

Gene symbol Product Transcript ID Status
MpRLK-Pelle_L-LEC28 Receptor-like Kinase (RLK) Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp6g14550.1 chr6:18156302..18159920 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp6g14550 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp6g14550 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.