Mp6g15150



Description

Annotation

Database ID Description
SMART SM00856 PMEI_2
ProSitePatterns PS00503 Pectinesterase signature 2.
Pfam PF04043 Plant invertase/pectin methylesterase inhibitor
NCBIfam TIGR01614 pectinesterase inhibitor domain
FunFam G3DSA:2.160.20.10:FF:000029 Pectinesterase 4
SUPERFAMILY SSF51126 Pectin lyase-like
SUPERFAMILY SSF101148 Plant invertase/pectin methylesterase inhibitor
CDD cd15798 PMEI-like_3
Gene3D G3DSA:2.160.20.10 -
Gene3D G3DSA:1.20.140.40 Invertase/pectin methylesterase inhibitor family protein
Pfam PF01095 Pectinesterase
PANTHER PTHR31707 PECTINESTERASE
KEGG K01051 pectinesterase [EC:3.1.1.11]
MapolyID Mapoly0056s0025 -
GO GO:0004857 enzyme inhibitor activity
GO GO:0046910 pectinesterase inhibitor activity
GO GO:0030599 pectinesterase activity
GO GO:0042545 cell wall modification

Nomenclature

Gene symbol Product Transcript ID Status
MpCE8.12 Cell wall related protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp6g15150.1 chr6:19405282..19408616 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp6g15150 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp6g15150 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.