Mp6g15550



Description

Annotation

Database ID Description
SMART SM00220 serkin_6
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
Pfam PF00069 Protein kinase domain
PANTHER PTHR46204 CHITIN ELICITOR RECEPTOR KINASE 1-RELATED
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
ProSiteProfiles PS50011 Protein kinase domain profile.
FunFam G3DSA:1.10.510.10:FF:000468 PTI1-like tyrosine-protein kinase 3
KOG KOG1187 Serine/threonine protein kinase; [T]
MapolyID Mapoly0056s0067 -
GO GO:0019199 transmembrane receptor protein kinase activity
GO GO:0005524 ATP binding
GO GO:0045087 innate immune response
GO GO:0004672 protein kinase activity
GO GO:0006468 protein phosphorylation

Nomenclature

Gene symbol Product Transcript ID Status
MpRLK-Pelle_LysM3 Receptor-like Kinase (RLK) Provisional
MpLYK2 LysM-domain-containing receptor kinase Published

Associated Literature (AI-based literature mining, Beta-version)

LysM-domain-containing receptor kinase (from nomenclature)

0 core 1 peripheral

Yotsui, I., et al. (2023) · Current Biology  research sequence comparator
LysM kinase family member (comparison).

Transcript models

Transcript ID Location Sequences Extract region
Mp6g15550.1 chr6:19708324..19715598 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp6g15550 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp6g15550 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.