Mp6g18420



Description

Annotation

Database ID Description
PRINTS PR00385 P450 superfamily signature
PRINTS PR00463 E-class P450 group I signature
Gene3D G3DSA:1.10.630.10 Cytochrome P450
Pfam PF00067 Cytochrome P450
PANTHER PTHR47949 CYTOCHROME P450 703A2-RELATED-RELATED
SUPERFAMILY SSF48264 Cytochrome P450
ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature.
KOG KOG0156 Cytochrome P450 CYP2 subfamily; [Q]
MapolyID Mapoly0038s0052 -
GO GO:0005506 iron ion binding
GO GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO GO:0004497 monooxygenase activity
GO GO:0020037 heme binding

Nomenclature

Gene symbol Product Transcript ID Status
MpCYP821A1 Cytochrome P450, Secondary metabolism enzyme Provisional

Associated Literature (AI-based literature mining, Beta-version)

Cytochrome P450, Secondary metabolism enzyme (from nomenclature)

0 core 1 peripheral

Jibran, R., et al. (2024b) · Frontiers in Plant Science  research experimental background
Cytochrome P450; up DEG.

Transcript models

Transcript ID Location Sequences Extract region
Mp6g18420.1 chr6:24549169..24551425 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp6g18420 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp6g18420 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.