Mp6g19710



Description

Annotation

Database ID Description
PANTHER PTHR12774 PEROXISOMAL BIOGENESIS FACTOR 19
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:1.20.120.900 Pex19, mPTS binding domain
Pfam PF04614 Pex19 protein family
KEGG K13337 peroxin-19
KOG KOG3133 40 kDa farnesylated protein associated with peroxisomes; [U]
MapolyID Mapoly0045s0092 -
GO GO:0005777 peroxisome
GO GO:0033328 peroxisome membrane targeting sequence binding
GO GO:0045046 protein import into peroxisome membrane
GO GO:0005778 peroxisomal membrane

Nomenclature

Gene symbol Product Transcript ID Status
MpPEX19 PEX19, Membrane protein import Published

Associated Literature (AI-based literature mining, Beta-version)

PEX19, Membrane protein import; Membrane protein import (from nomenclature)

0 core 1 peripheral

Goto-Yamada, S., et al. (2022) · Frontiers in Cell and Developmental Biology  review citation background
M. polymorpha PEX19 (peroxin/peroxisome biogenesis)

Transcript models

Transcript ID Location Sequences Extract region
Mp6g19710.1 chr6:25919393..25922816 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp6g19710.2 chr6:25919393..25922816 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp6g19710.3 chr6:25919393..25922816 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp6g19710 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp6g19710 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.