Mp6g20430
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:3.40.462.20 | - |
| Pfam | PF08031 | Berberine and berberine like |
| Pfam | PF01565 | FAD binding domain |
| SUPERFAMILY | SSF56176 | FAD-binding/transporter-associated domain-like |
| ProSiteProfiles | PS51387 | PCMH-type FAD-binding domain profile. |
| Gene3D | G3DSA:3.30.43.10 | - |
| Gene3D | G3DSA:3.30.465.10 | - |
| PANTHER | PTHR42973 | BINDING OXIDOREDUCTASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G17690)-RELATED |
| KOG | KOG1231 | Proteins containing the FAD binding domain; C-term missing; [C] |
| MapolyID | Mapoly0045s0021 | - |
| GO | GO:0050660 | flavin adenine dinucleotide binding |
| GO | GO:0071949 | FAD binding |
| GO | GO:0016491 | oxidoreductase activity |
Nomenclature
No gene symbols are registered for this gene.
Associated Literature (AI-based literature mining, Beta-version)
Berberine-bridge oxido-reductase-like (BBE-like) protein detected by MS as a major abundant cell wall protein (Table 3).
1 core 0 peripheral
Kolkas, H., et al. (2022)
· Frontiers in Plant Science research experimental subject
Berberine-bridge oxido-reductase-like (BBE-like) protein detected by MS as a major abundant cell wall protein (Table 3).
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp6g20430 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp6g20430.1 GCCGGGGCTG TTAGGGAGGC TTTCGTCTGA CCGCTCGAGG GTCGTCATCC TCTGTCGACA TCGAACCTCG TATCAGAGTG GACGAGTGGT AGATCGAGCG AGTCAGAAAA TTTAGACCAG GATTCTTTGT AGACCCAGTA CCGTGTCACA GCACGAGCTT GAGTCAGTAG AATGAATATT GTTCATATCG AGCAGTTTTA GAATCATTAA GCCGTAGAAG TTTGGGAGGA GTGAGGGATC AGATTGTTTT TCTCCTTGAA TTTTTAGTTT AGAAATCTTA GCCGCCGTCA TGAAGCGAGC TGGAGGGCCG ACGATGTTTA CACGGATTTG TCTCTTCACT CTCGTGGCTC TGCAGTGCTA CACCGGACCT GCTGCTGCTT TTGGAGTACG TCTTTCTTAG CTCTAATCAC CCGAGTGCCT CTCTCTCTCT CTCTCTCTCT CATCTTCCCA ATTGTGAGGA ATTGTGTTTC TCTCTACCGA TGTTCCACGT TCATCGACAG GGTGGAATAA TGATTCAGAA TCCTCAATTA TTACGGAACA TAGAAGCCTT GCACTACCCT GGAATCCACT TGCATGCCTT CCAACGAAAT AAAATGTTTA GGGAATTTCG TGCGTGTAAT AGCTTTTAAC ATGCCGCTTG TATGAGGAAT ATAAGAGATT TGACGTCGAG ATTCCCTCTA ATATTTGGTG TGGTGTGTGA ATTTGGACAG CCTGCGAGAA GATTGCTTCA GCAGTCGTTG GCTGACTGTC TCCGACCAGC TGGAGCCAGG ATCGTTCTGC CGAGCAGCTC TGATTACCAG ACTGCACGAG GCCATGTTTT CAACCACAGA TTTCTGTGGT CGCCTGCAGC ATTCGTCTTC GCCACCACCA CAGCCCATGT ATCGAACGCT ATACAATGTG CTGTGAGACT GAATGTCGGA ATCGCTCCCC GCAGTGGAGG CCATTCTTAT GAAGACTATT CTCTCGGTAC GCAATGAAGT CCCTGCTTAC TCCTGTCGGG TCTCAATTCA CCCGTCGATG TGAAGACCGA GCTGTCAGCT GATTGCTTGC TCTGTGACAT TATTTCTACA GAATCCAGTG GCTTTCGTGG AATCTGCTGA ACCGAGTATT ATTTGATGTG CATCCAGGTG GAAGGGATGG TGTGATAGTC GTGGACCTGG AAGGCATGAA CAAGGTCACG CTGAACAAGA CCTCGAAACT CGCGACAGTT GGAGGAGGTG CACGACTAGG ACCCATCAAG CTGGCTCTCT GGAATCAAGG AAAGGTGTCC ACTCCATCTG GAACCTGCCC CAGCGTAGGA GTTGGAGGCC ACTCTCTCGG TGGTGGATGG GGCTTCATCT CAAGGAAGTG GGGGATCATG GCTGACAACA TTGTCGAAGT CGAGATTGTC ATTGCCAACG GAACCGTCAT CACTGCCAAT TCCCAGAAGA ACTCAGACCT CTTGTTCGCT CTCAAGGGCG CCGGTGCCAA CTCTTTCGGT AAGACACGAG TCCAATGCTG TGTGCTCCTG AATCTGATCG CCTGATCAAG AGCTCCGTGT AACCATAGAT TTTTTTAGAC ATCTACCAGA ACTACTCCTA CAATCTACAT ATATCTGCCA CATCGACACT TCAAGCTCTA TTCGTCTCAT TTACATCCGG TTTGGAAAAA AGTGATGTGC AAGTCAACTG AACTACAATT GAACATGCTG TCGGCTTGAC TTCGCTTGTC AGTATGAAAG GCTCAGATTC ACCTTCGAAG TATTATATGA AAGATCTGTC CTGGGGAATC GGACGAGCTG AGTATCTGCT CGGAACATTA ATGTGGCAGA CTTGTGACTT GTATAAGGCG GTTGGATTGA CTTGAGCATT GTGATTGTGT CTCATAGGTA TTGTTACCAA ATTCACCTTC AAGACATTCG ATGTCTCGAA GAAGGTGACG TACTTCAGCT ACAACTTTCA GAAGAGTCAG CAGGCTGCGA CCACCAAGGC ATTCGGTCTC TGGGGACTTA CTGTCACCAA TGATGTCTCT GCCTCTCTGT ACCACGATCC ATCGGGTGGG AACACTTTCT GGGGAGTTTA TCTCGGCCCC AAGACCAACT TGAAGAGTGT CCTGCAGAAG TTCTTCAGTA ACGCCCCTGC AGCTTCCAGT ACCACCGAGC TGGAAACGGA TTACATCAGG ACTGTTGTCA TCAATGCAGG ATTCAAGGAA ACCGATCCCA TTTCGATCCT GGATTTGAAG AACTACACCT ACGAAACTAG AACTTTCAAG TCCAAGTCTA TTTTCGTCAA AGGATCGGGA TTCTCGGATG CAGGAATTCA AGCTTACGTG AACAAACTGC AGCAAGGCCC TGCCCAGAGT TACATGATCT TCGATCTGTT CGGTGGTACC GGTTCCGCCA TCAACGCTAT CTCACCTAGT GCAAGCGCTT GGGTTCATCG GGATTCTCTT TACAGCATTC AGATGTTCAC TTACTGGAAT GACAGGCCCC AGGATGCTCA GAACGCCATC AACTGGATCG AAAACATCTG GAGCACTGTC CGTCCATTCG CATCAGGCGA GGCGTACCAG AACTACATCG ACAGCAAGAT GCCACTCTCA GCTTACTATG GCTCCAACCT TGACAAGCTG AAATCCATCA AGAGGAAGTT TGACTCCCGC AACATCTTCA ACTATGCCCA AAGCATTCCA CTGAGTTAGT TACCATCCAG CCTCCTCTGA TTTTTGTGCA GTCTGACCTC CTGTTTTCAC TCTTCCTCAT CATCAATCCC TCCCCATTCC CAGCTCCCCA ATTCCCCCAC GGCGCATCAA CATCGACAAC GATTTCCCCA CGTTGTGATA CCTGTACACT TGATGATCGC CATCCCGATT GACGCCCCAT GATACTCAGA TTTCATGCTC TTAACAAGCA AGCTTGCACA TGTCCACACA AATGACAGGT CGACGCGTCA GACGTGGAAG TATTAAAAGC GAGAAGTATC AATCCTTCCT GGCGGCCAGC CGTTCCCGTC ATTCGTTCCG GTCCTCAGTG CACTAGGCCT TGACTGGAGT AAGTCAGTCT GGTCCGGGTA TCATCCGAAT GGGGTCTCAA GCCTAGCAAT TAGAAGACAG AAAGACAGCA AGTAGTCCAA TTAGAGATAC GTCAAACTAG TCCGATTTTC CCGTTAGGAC CCTCACGTTT AAGCTGAACC TTGAACCAGA GCACTGAAAA GCTCGATCAA CAGAACCCAT AACCTAACTC TATGAATTGG AACATTAAAT GTCCAATTTT CCCAGTAGGA CTTCCACAAC CGTTTTTGAA TTCCACCCGT CTAGATAAGT CCTAAGACGG CTGCCAAGTT TACATTCTAT TATTATATTC ACGTGTTTGA AATATTCTGA ACTTTTAGCA CGTAGAGTTC CGAAAACCAG CTGTTGAAGT CGATTGCCCT CAACTGAAGA GGACTGAGAG CTGTCTGACG AATCTGCACT TGTCTTGAAG TGCTAGTTTT AAGGATACAG TGGGATCTTG GGCATCTCCA GCTTGCCTCA GAGTCCTGTA GACAGGGATG ACATGTGCTG GTCAATATAA GACTGGAGCT TTGCTGCAAA ACTCGCAGCA CCTCGATCTG GGATCAGTGA CCCGTACTGA TACGGACCGA AATGTTTTAG ATAAAGCCTA ATCTAAT |
mRNA UTR + CDS |
| >Mp6g20430.1 GCCGGGGCTG TTAGGGAGGC TTTCGTCTGA CCGCTCGAGG GTCGTCATCC TCTGTCGACA TCGAACCTCG TATCAGAGTG GACGAGTGGT AGATCGAGCG AGTCAGAAAA TTTAGACCAG GATTCTTTGT AGACCCAGTA CCGTGTCACA GCACGAGCTT GAGTCAGTAG AATGAATATT GTTCATATCG AGCAGTTTTA GAATCATTAA GCCGTAGAAG TTTGGGAGGA GTGAGGGATC AGATTGTTTT TCTCCTTGAA TTTTTAGTTT AGAAATCTTA GCCGCCGTCA TGAAGCGAGC TGGAGGGCCG ACGATGTTTA CACGGATTTG TCTCTTCACT CTCGTGGCTC TGCAGTGCTA CACCGGACCT GCTGCTGCTT TTGGACCTGC GAGAAGATTG CTTCAGCAGT CGTTGGCTGA CTGTCTCCGA CCAGCTGGAG CCAGGATCGT TCTGCCGAGC AGCTCTGATT ACCAGACTGC ACGAGGCCAT GTTTTCAACC ACAGATTTCT GTGGTCGCCT GCAGCATTCG TCTTCGCCAC CACCACAGCC CATGTATCGA ACGCTATACA ATGTGCTGTG AGACTGAATG TCGGAATCGC TCCCCGCAGT GGAGGCCATT CTTATGAAGA CTATTCTCTC GGTGGAAGGG ATGGTGTGAT AGTCGTGGAC CTGGAAGGCA TGAACAAGGT CACGCTGAAC AAGACCTCGA AACTCGCGAC AGTTGGAGGA GGTGCACGAC TAGGACCCAT CAAGCTGGCT CTCTGGAATC AAGGAAAGGT GTCCACTCCA TCTGGAACCT GCCCCAGCGT AGGAGTTGGA GGCCACTCTC TCGGTGGTGG ATGGGGCTTC ATCTCAAGGA AGTGGGGGAT CATGGCTGAC AACATTGTCG AAGTCGAGAT TGTCATTGCC AACGGAACCG TCATCACTGC CAATTCCCAG AAGAACTCAG ACCTCTTGTT CGCTCTCAAG GGCGCCGGTG CCAACTCTTT CGGTATTGTT ACCAAATTCA CCTTCAAGAC ATTCGATGTC TCGAAGAAGG TGACGTACTT CAGCTACAAC TTTCAGAAGA GTCAGCAGGC TGCGACCACC AAGGCATTCG GTCTCTGGGG ACTTACTGTC ACCAATGATG TCTCTGCCTC TCTGTACCAC GATCCATCGG GTGGGAACAC TTTCTGGGGA GTTTATCTCG GCCCCAAGAC CAACTTGAAG AGTGTCCTGC AGAAGTTCTT CAGTAACGCC CCTGCAGCTT CCAGTACCAC CGAGCTGGAA ACGGATTACA TCAGGACTGT TGTCATCAAT GCAGGATTCA AGGAAACCGA TCCCATTTCG ATCCTGGATT TGAAGAACTA CACCTACGAA ACTAGAACTT TCAAGTCCAA GTCTATTTTC GTCAAAGGAT CGGGATTCTC GGATGCAGGA ATTCAAGCTT ACGTGAACAA ACTGCAGCAA GGCCCTGCCC AGAGTTACAT GATCTTCGAT CTGTTCGGTG GTACCGGTTC CGCCATCAAC GCTATCTCAC CTAGTGCAAG CGCTTGGGTT CATCGGGATT CTCTTTACAG CATTCAGATG TTCACTTACT GGAATGACAG GCCCCAGGAT GCTCAGAACG CCATCAACTG GATCGAAAAC ATCTGGAGCA CTGTCCGTCC ATTCGCATCA GGCGAGGCGT ACCAGAACTA CATCGACAGC AAGATGCCAC TCTCAGCTTA CTATGGCTCC AACCTTGACA AGCTGAAATC CATCAAGAGG AAGTTTGACT CCCGCAACAT CTTCAACTAT GCCCAAAGCA TTCCACTGAG TTAGTTACCA TCCAGCCTCC TCTGATTTTT GTGCAGTCTG ACCTCCTGTT TTCACTCTTC CTCATCATCA ATCCCTCCCC ATTCCCAGCT CCCCAATTCC CCCACGGCGC ATCAACATCG ACAACGATTT CCCCACGTTG TGATACCTGT ACACTTGATG ATCGCCATCC CGATTGACGC CCCATGATAC TCAGATTTCA TGCTCTTAAC AAGCAAGCTT GCACATGTCC ACACAAATGA CAGGTCGACG CGTCAGACGT GGAAGTATTA AAAGCGAGAA GTATCAATCC TTCCTGGCGG CCAGCCGTTC CCGTCATTCG TTCCGGTCCT CAGTGCACTA GGCCTTGACT GGAGTAAGTC AGTCTGGTCC GGGTATCATC CGAATGGGGT CTCAAGCCTA GCAATTAGAA GACAGAAAGA CAGCAAGTAG TCCAATTAGA GATACGTCAA ACTAGTCCGA TTTTCCCGTT AGGACCCTCA CGTTTAAGCT GAACCTTGAA CCAGAGCACT GAAAAGCTCG ATCAACAGAA CCCATAACCT AACTCTATGA ATTGGAACAT TAAATGTCCA ATTTTCCCAG TAGGACTTCC ACAACCGTTT TTGAATTCCA CCCGTCTAGA TAAGTCCTAA GACGGCTGCC AAGTTTACAT TCTATTATTA TATTCACGTG TTTGAAATAT TCTGAACTTT TAGCACGTAG AGTTCCGAAA ACCAGCTGTT GAAGTCGATT GCCCTCAACT GAAGAGGACT GAGAGCTGTC TGACGAATCT GCACTTGTCT TGAAGTGCTA GTTTTAAGGA TACAGTGGGA TCTTGGGCAT CTCCAGCTTG CCTCAGAGTC CTGTAGACAG GGATGACATG TGCTGGTCAA TATAAGACTG GAGCTTTGCT GCAAAACTCG CAGCACCTCG ATCTGGGATC AGTGACCCGT ACTGATACGG ACCGAAATGT TTTAGATAAA GCCTAATCTA AT |
CDS |
| >Mp6g20430.1 ATGAAGCGAG CTGGAGGGCC GACGATGTTT ACACGGATTT GTCTCTTCAC TCTCGTGGCT CTGCAGTGCT ACACCGGACC TGCTGCTGCT TTTGGACCTG CGAGAAGATT GCTTCAGCAG TCGTTGGCTG ACTGTCTCCG ACCAGCTGGA GCCAGGATCG TTCTGCCGAG CAGCTCTGAT TACCAGACTG CACGAGGCCA TGTTTTCAAC CACAGATTTC TGTGGTCGCC TGCAGCATTC GTCTTCGCCA CCACCACAGC CCATGTATCG AACGCTATAC AATGTGCTGT GAGACTGAAT GTCGGAATCG CTCCCCGCAG TGGAGGCCAT TCTTATGAAG ACTATTCTCT CGGTGGAAGG GATGGTGTGA TAGTCGTGGA CCTGGAAGGC ATGAACAAGG TCACGCTGAA CAAGACCTCG AAACTCGCGA CAGTTGGAGG AGGTGCACGA CTAGGACCCA TCAAGCTGGC TCTCTGGAAT CAAGGAAAGG TGTCCACTCC ATCTGGAACC TGCCCCAGCG TAGGAGTTGG AGGCCACTCT CTCGGTGGTG GATGGGGCTT CATCTCAAGG AAGTGGGGGA TCATGGCTGA CAACATTGTC GAAGTCGAGA TTGTCATTGC CAACGGAACC GTCATCACTG CCAATTCCCA GAAGAACTCA GACCTCTTGT TCGCTCTCAA GGGCGCCGGT GCCAACTCTT TCGGTATTGT TACCAAATTC ACCTTCAAGA CATTCGATGT CTCGAAGAAG GTGACGTACT TCAGCTACAA CTTTCAGAAG AGTCAGCAGG CTGCGACCAC CAAGGCATTC GGTCTCTGGG GACTTACTGT CACCAATGAT GTCTCTGCCT CTCTGTACCA CGATCCATCG GGTGGGAACA CTTTCTGGGG AGTTTATCTC GGCCCCAAGA CCAACTTGAA GAGTGTCCTG CAGAAGTTCT TCAGTAACGC CCCTGCAGCT TCCAGTACCA CCGAGCTGGA AACGGATTAC ATCAGGACTG TTGTCATCAA TGCAGGATTC AAGGAAACCG ATCCCATTTC GATCCTGGAT TTGAAGAACT ACACCTACGA AACTAGAACT TTCAAGTCCA AGTCTATTTT CGTCAAAGGA TCGGGATTCT CGGATGCAGG AATTCAAGCT TACGTGAACA AACTGCAGCA AGGCCCTGCC CAGAGTTACA TGATCTTCGA TCTGTTCGGT GGTACCGGTT CCGCCATCAA CGCTATCTCA CCTAGTGCAA GCGCTTGGGT TCATCGGGAT TCTCTTTACA GCATTCAGAT GTTCACTTAC TGGAATGACA GGCCCCAGGA TGCTCAGAAC GCCATCAACT GGATCGAAAA CATCTGGAGC ACTGTCCGTC CATTCGCATC AGGCGAGGCG TACCAGAACT ACATCGACAG CAAGATGCCA CTCTCAGCTT ACTATGGCTC CAACCTTGAC AAGCTGAAAT CCATCAAGAG GAAGTTTGAC TCCCGCAACA TCTTCAACTA TGCCCAAAGC ATTCCACTGA GTTAG |
Protein |
| >Mp6g20430.1 MKRAGGPTMF TRICLFTLVA LQCYTGPAAA FGPARRLLQQ SLADCLRPAG ARIVLPSSSD YQTARGHVFN HRFLWSPAAF VFATTTAHVS NAIQCAVRLN VGIAPRSGGH SYEDYSLGGR DGVIVVDLEG MNKVTLNKTS KLATVGGGAR LGPIKLALWN QGKVSTPSGT CPSVGVGGHS LGGGWGFISR KWGIMADNIV EVEIVIANGT VITANSQKNS DLLFALKGAG ANSFGIVTKF TFKTFDVSKK VTYFSYNFQK SQQAATTKAF GLWGLTVTND VSASLYHDPS GGNTFWGVYL GPKTNLKSVL QKFFSNAPAA SSTTELETDY IRTVVINAGF KETDPISILD LKNYTYETRT FKSKSIFVKG SGFSDAGIQA YVNKLQQGPA QSYMIFDLFG GTGSAINAIS PSASAWVHRD SLYSIQMFTY WNDRPQDAQN AINWIENIWS TVRPFASGEA YQNYIDSKMP LSAYYGSNLD KLKSIKRKFD SRNIFNYAQS IPLS |