Mp6g21470



Description

Annotation

Database ID Description
SUPERFAMILY SSF47459 HLH, helix-loop-helix DNA-binding domain
Gene3D G3DSA:4.10.280.10 -
PANTHER PTHR45914 TRANSCRIPTION FACTOR HEC3-RELATED
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50888 Myc-type, basic helix-loop-helix (bHLH) domain profile.
SMART SM00353 finulus
CDD cd11454 bHLH_AtIND_like
Pfam PF00010 Helix-loop-helix DNA-binding domain
FunFam G3DSA:4.10.280.10:FF:000046 Transcription factor bHLH83
KOG KOG3663 Nuclear factor I; N-term missing; [K]
KOG KOG0129 Predicted RNA-binding protein (RRM superfamily); C-term missing; [J]
MapolyID Mapoly0091s0008 -
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0046983 protein dimerization activity

Nomenclature

Gene symbol Product Transcript ID Status
MpBHLH28 transcription factor, bHLH Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp6g21470.1 chr6:27789611..27794378 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp6g21470.2 chr6:27789611..27794378 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.