Mp7g00660



Description

Annotation

Database ID Description
PANTHER PTHR34673 COLD-REGULATED PROTEIN
MapolyID Mapoly0046s0059 -

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

Locus ID for MpSGF13A, listed in the candidate peptide gene table.

0 core 1 peripheral

Kobayashi, H., et al. (2023) · Frontiers in Plant Science  research sequence background
Locus ID for MpSGF13A, listed in the candidate peptide gene table.

Transcript models

Transcript ID Location Sequences Extract region
Mp7g00660.1 chr7:879317..880547 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp7g00660 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp7g00660 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.