Mp7g01380



Description

Annotation

Database ID Description
PANTHER PTHR43272 LONG-CHAIN-FATTY-ACID--COA LIGASE
ProSitePatterns PS00455 Putative AMP-binding domain signature.
CDD cd05927 LC-FACS_euk
Gene3D G3DSA:3.40.50.12780 -
SUPERFAMILY SSF56801 Acetyl-CoA synthetase-like
Pfam PF00501 AMP-binding enzyme
KEGG K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
KOG KOG1256 Long-chain acyl-CoA synthetases (AMP-forming); [I]
MapolyID Mapoly0099s0012 -
GO GO:0005783 endoplasmic reticulum
GO GO:0006631 fatty acid metabolic process
GO GO:0004467 long-chain fatty acid-CoA ligase activity
GO GO:0016020 membrane

Nomenclature

Gene symbol Product Transcript ID Status
MpLACS Acyl-CoA synthase, Secondary metabolism enzyme, Cuticle related protein Provisional
This is a provisional entry. If you want to update the entry, please contact the administrator.

Transcript models

Transcript ID Location Sequences Extract region
Mp7g01380.1 chr7:2338569..2346232 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp7g01380 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp7g01380 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.