Mp7g01800



Description

Annotation

Database ID Description
SUPERFAMILY SSF90229 CCCH zinc finger
Gene3D G3DSA:4.10.1000.10 -
PANTHER PTHR38160 ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40
Coils Coil Coil
ProSiteProfiles PS50103 Zinc finger C3H1-type profile.
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00356 c3hfinal6
KOG KOG1595 CCCH-type Zn-finger protein; N-term missing; C-term missing; [R]
MapolyID Mapoly0099s0053 -
GO GO:0046872 metal ion binding

Nomenclature

Gene symbol Product Transcript ID Status
MpC3H27 transcription factor, C3H Provisional
This is a provisional entry. If you want to update the entry, please contact the administrator.

Transcript models

Transcript ID Location Sequences Extract region
Mp7g01800.1 chr7:2804943..2817218 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g01800.2 chr7:2804940..2817218 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g01800.3 chr7:2804943..2817218 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g01800.4 chr7:2805209..2817077 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g01800.5 chr7:2805209..2817077 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g01800.6 chr7:2805209..2817077 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g01800.7 chr7:2805209..2817077 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp7g01800 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp7g01800 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.