Mp7g02280



Description

Annotation

Database ID Description
Gene3D G3DSA:3.30.450.20 PAS domain
NCBIfam TIGR00229 PAS domain S-box protein
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00091 pas_2
FunFam G3DSA:1.10.510.10:FF:000476 PAS domain-containing protein tyrosine kinase family protein
Pfam PF13426 PAS domain
Pfam PF07714 Protein tyrosine and serine/threonine kinase
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain)
CDD cd13999 STKc_MAP3K-like
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
ProSiteProfiles PS50113 PAC domain profile.
PRINTS PR00109 Tyrosine kinase catalytic domain signature
FunFam G3DSA:3.30.200.20:FF:000329 PAS domain-containing protein tyrosine kinase
CDD cd00130 PAS
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
SMART SM00220 serkin_6
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
ProSiteProfiles PS50112 PAS repeat profile.
Coils Coil Coil
ProSiteProfiles PS50011 Protein kinase domain profile.
PANTHER PTHR23257 SERINE-THREONINE PROTEIN KINASE
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
KOG KOG0192 Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs; [T]
KOG KOG1229 3'5'-cyclic nucleotide phosphodiesterases; C-term missing; [T]
MapolyID Mapoly0088s0059 -
GO GO:0005524 ATP binding
GO GO:0004672 protein kinase activity
GO GO:0006468 protein phosphorylation
GO GO:0007165 signal transduction
GO GO:0005737 cytoplasm

Nomenclature

Gene symbol Product Transcript ID Status
MpMAPKKK16 MAP-kinase, MAPKKK Provisional

Associated Literature (AI-based literature mining, Beta-version)

Group B2 Raf gene (Mapoly0088s0059/Mp7g02280; PAS and kinase domains, no EDR1) tested functionally. Restored ABA-induced expression in P. patens with greater effect than MpB2Raf2, but Mpb2raf mutant ABA response resembled wild-type.

1 core 0 peripheral

Jahan, A., et al. (2022) · Frontiers in Plant Science  research experimental subject
Group B2 Raf gene (Mapoly0088s0059/Mp7g02280; PAS and kinase domains, no EDR1) tested functionally. Restored ABA-induced expression in P. patens with greater effect than MpB2Raf2, but Mpb2raf mutant ABA response resembled wild-type.

Transcript models

Transcript ID Location Sequences Extract region
Mp7g02280.1 chr7:3196217..3204887 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp7g02280 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp7g02280 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.