Mp7g03210



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:3.30.900.10 HORMA domain
Pfam PF10033 Autophagy-related protein 13
PANTHER PTHR13430 UNCHARACTERIZED
KEGG K08331 autophagy-related protein 13
KOG KOG4573 Phosphoprotein involved in cytoplasm to vacuole targeting and autophagy; [U]
MapolyID Mapoly0074s0075 -
GO GO:0000045 autophagosome assembly
GO GO:0034497 protein localization to phagophore assembly site
GO GO:1990316 Atg1/ULK1 kinase complex
GO GO:0000423 mitophagy
GO GO:0006914 autophagy
GO GO:0005829 cytosol
GO GO:0034727 piecemeal microautophagy of the nucleus
GO GO:0000407 phagophore assembly site

Nomenclature

Gene symbol Product Transcript ID Status
MpATG13 Autophagy protein Provisional

Associated Literature (AI-based literature mining, Beta-version)

Core autophagy-related gene. Knockout mutants retained a larger number of mitochondria in spermatozoids than wild-type, evidencing autophagy's requirement for organelle reorganization.

1 core 0 peripheral

Norizuk, T., et al. (2022) · Autophagy  research experimental subject
Core autophagy-related gene. Knockout mutants retained a larger number of mitochondria in spermatozoids than wild-type, evidencing autophagy's requirement for organelle reorganization.

Transcript models

Transcript ID Location Sequences Extract region
Mp7g03210.1 chr7:5108227..5115087 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp7g03210 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp7g03210 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.